RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 PSMD1Q99460 953 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 SLF1Q9BQI6 1058 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 SYT17Q9BSW7 474 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 IER2Q9BTL4 223 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 SPATA9Q9BWV2 254 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 ADAM19Q9H013 955 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 FAM107BQ9H098 131 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 DISC1Q9NRI5 854 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 TAB2Q9NYJ8 693 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 TFCP2L1Q9NZI6 479 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 GMIPQ9P107 970 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 RNF14Q9UBS8 474 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 FAM184BQ9ULE4 1060 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 SNX12Q9UMY4 172 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 PCDHA4Q9UN74 947 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 ATP8A1Q9Y2Q0 1164 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 ADAMTSL1Q8N6G6 1762 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 SBF1O95248 1867 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 TFRCP02786 760 aaKnown RBP4.32□□□□□ -1.72
CLTC-209ENST00000498711 GSTP1P09211 210 aaKnown RBP4.32□□□□□ -1.72
CLTC-209ENST00000498711 RHOXF2BP0C7M4 288 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 ZBTB48P10074 688 aaPredicted RBP4.32□□□□□ -1.72
CLTC-209ENST00000498711 CALML3P27482 149 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 IRAK1P51617 712 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 TBC1D8BQ0IIM8 1120 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 STIM1Q13586 685 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 GRM4Q14833 912 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 YTHDF3Q7Z739 585 aaKnown RBP4.32□□□□□ -1.72
CLTC-209ENST00000498711 DGKHQ86XP1 1220 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 SMYD4Q8IYR2 804 aaPredicted RBP4.32□□□□□ -1.72
CLTC-209ENST00000498711 LRRC47Q8N1G4 583 aaKnown RBP4.32□□□□□ -1.72
CLTC-209ENST00000498711 ACSBG1Q96GR2 724 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 RHOXF2Q9BQY4 288 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 LACRTQ9GZZ8 138 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 EPN3Q9H201 632 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 VPS16Q9H269 839 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 FAM204AQ9H8W3 233 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 NHEJ1Q9H9Q4 299 aaPredicted RBP4.32□□□□□ -1.72
CLTC-209ENST00000498711 A1CFQ9NQ94 594 aaKnown RBP4.32□□□□□ -1.72
CLTC-209ENST00000498711 EXOC1Q9NV70 894 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 CACNA2D2Q9NY47 1150 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 TRIM10Q9UDY6 481 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 TRMT112Q9UI30 125 aaKnown RBP4.32□□□□□ -1.72
CLTC-209ENST00000498711 PCDHA6Q9UN73 950 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 PLAGL2Q9UPG8 496 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 GDAQ9Y2T3 454 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 LUC7L2Q9Y383 392 aaKnown RBP4.32□□□□□ -1.72
CLTC-209ENST00000498711 JRKLQ9Y4A0 524 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 PCDHA8Q9Y5H6 950 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 SLC35F4A4IF30 521 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 SLC26A4O43511 780 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 MYBL2P10244 700 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 CYP7A1P22680 504 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 CYLC1P35663 651 aaPredicted RBP4.31□□□□□ -1.72
CLTC-209ENST00000498711 STAT3P40763 770 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 TDO2P48775 406 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 FNTAP49354 379 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 CDKN1CP49918 316 aaPredicted RBP4.31□□□□□ -1.72
CLTC-209ENST00000498711 GSCP56915 257 aaPredicted RBP4.31□□□□□ -1.72
CLTC-209ENST00000498711 APBA1Q02410 837 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 PTSQ03393 145 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 UBXN1Q04323 297 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 IKBKEQ14164 716 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 HSP90AA4PQ58FG1 418 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 CCDC178Q5BJE1 867 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 DPY19L2P1Q6NXN4 242 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 CLEC4GQ6UXB4 293 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 FAM35AQ86V20 835 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 THNSL2Q86YJ6 484 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 BLIDQ8IZY5 108 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 IQCKQ8N0W5 287 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 RNF10Q8N5U6 811 aaKnown RBP4.31□□□□□ -1.72
CLTC-209ENST00000498711 ANKRD20A12PQ8NF67 263 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 PPM1EQ8WY54 764 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.31□□□□□ -1.723e-10■■■■■ 88.3
CLTC-209ENST00000498711 P2RX5Q93086 422 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 JAKMIP2Q96AA8 810 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 UBAC1Q9BSL1 405 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 SELENOOQ9BVL4 669 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 BLZF1Q9H2G9 400 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 SH2D4AQ9H788 454 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 NARFQ9UHQ1 456 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 TMEM59LQ9UK28 342 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 PRR12Q9ULL5 1215 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 NENFQ9UMX5 172 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 PHF24Q9UPV7 400 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 FAM205AQ6ZU69 1335 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 MYH8P13535 1937 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 PVALEFA0A1B0GWK0 134 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 SSU72P8A0A1W2PR75 194 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 IQCA1LA6NCM1 817 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 SMIM22K7EJ46 135 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 KRT86O43790 486 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 EDIL3O43854 480 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 PRDM1O75626 825 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 FAM153BP0C7A2 387 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 CHRNDQ07001 517 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 IFIT1BQ5T764 474 aaKnown RBP4.31□□□□□ -1.72
CLTC-209ENST00000498711 ICE2Q659A1 982 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 OVOS1Q6IE37 1185 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms