RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 POU5F1BQ06416 359 aa14.91□□□□□ -0.02
CPNE1-227ENST00000498056 NFX1Q12986 1120 aaKnown RBP14.91□□□□□ -0.02
CPNE1-227ENST00000498056 PRPF4BQ13523 1007 aaKnown RBP14.91□□□□□ -0.02
CPNE1-227ENST00000498056 STIM1Q13586 685 aa14.91□□□□□ -0.02
CPNE1-227ENST00000498056 MORC3Q14149 939 aa14.91□□□□□ -0.02
CPNE1-227ENST00000498056 STX1AQ16623 288 aa14.91□□□□□ -0.02
CPNE1-227ENST00000498056 ZSCAN23Q3MJ62 389 aa14.91□□□□□ -0.02
CPNE1-227ENST00000498056 TAS1R3Q7RTX0 852 aa14.91□□□□□ -0.02
CPNE1-227ENST00000498056 ZNF720Q7Z2F6 126 aa14.91□□□□□ -0.02
CPNE1-227ENST00000498056 DEFB128Q7Z7B8 93 aa14.91□□□□□ -0.02
CPNE1-227ENST00000498056 MYOCDQ8IZQ8 938 aa14.91□□□□□ -0.02
CPNE1-227ENST00000498056 IFIH1Q9BYX4 1025 aaKnown RBP14.91□□□□□ -0.02
CPNE1-227ENST00000498056 ST6GALNAC4Q9H4F1 302 aa14.91□□□□□ -0.02
CPNE1-227ENST00000498056 ANKFY1Q9P2R3 1169 aa14.91□□□□□ -0.02
CPNE1-227ENST00000498056 TBX20Q9UMR3 447 aa14.91□□□□□ -0.02
CPNE1-227ENST00000498056 PIN4Q9Y237 131 aaKnown RBP14.91□□□□□ -0.02
CPNE1-227ENST00000498056 NBNO60934 754 aa14.9□□□□□ -0.02
CPNE1-227ENST00000498056 PPP1R37O75864 691 aa14.9□□□□□ -0.02
CPNE1-227ENST00000498056 SCP2P22307 547 aa14.9□□□□□ -0.02
CPNE1-227ENST00000498056 ITGB8P26012 769 aa14.9□□□□□ -0.02
CPNE1-227ENST00000498056 LIG4P49917 911 aa14.9□□□□□ -0.02
CPNE1-227ENST00000498056 GTF2BQ00403 316 aa14.9□□□□□ -0.02
CPNE1-227ENST00000498056 DPCR1Q3MIW9 517 aa14.9□□□□□ -0.02
CPNE1-227ENST00000498056 KLHL10Q6JEL2 608 aa14.9□□□□□ -0.02
CPNE1-227ENST00000498056 PPP4R3CPQ6ZMV5 832 aa14.9□□□□□ -0.02
CPNE1-227ENST00000498056 EPM2AIP1Q7L775 607 aaPredicted RBP14.9□□□□□ -0.02
CPNE1-227ENST00000498056 MAP4K3Q8IVH8 894 aa14.9□□□□□ -0.02
CPNE1-227ENST00000498056 SYCP3Q8IZU3 236 aa14.9□□□□□ -0.02
CPNE1-227ENST00000498056 TMEM199Q8N511 208 aa14.9□□□□□ -0.02
CPNE1-227ENST00000498056 SCFD1Q8WVM8 642 aa14.9□□□□□ -0.02
CPNE1-227ENST00000498056 CPB2Q96IY4 423 aa14.9□□□□□ -0.02
CPNE1-227ENST00000498056 PRIMPOLQ96LW4 560 aa14.9□□□□□ -0.02
CPNE1-227ENST00000498056 ACCSQ96QU6 501 aa14.9□□□□□ -0.02
CPNE1-227ENST00000498056 NTPCRQ9BSD7 190 aaKnown RBP14.9□□□□□ -0.02
CPNE1-227ENST00000498056 MRPL4Q9BYD3 311 aaKnown RBP14.9□□□□□ -0.02
CPNE1-227ENST00000498056 OSBPL7Q9BZF2 842 aa14.9□□□□□ -0.02
CPNE1-227ENST00000498056 TMEM134Q9H6X4 195 aa14.9□□□□□ -0.02
CPNE1-227ENST00000498056 AGO3Q9H9G7 860 aaKnown RBP14.9□□□□□ -0.02
CPNE1-227ENST00000498056 EXOC7Q9UPT5 735 aa14.9□□□□□ -0.02
CPNE1-227ENST00000498056 CTNND2Q9UQB3 1225 aa14.9□□□□□ -0.02
CPNE1-227ENST00000498056 USP20Q9Y2K6 914 aa14.9□□□□□ -0.02
CPNE1-227ENST00000498056 PCDHB13Q9Y5F0 798 aa14.9□□□□□ -0.02
CPNE1-227ENST00000498056 FNDC1Q4ZHG4 1894 aaPredicted RBP14.89□□□□□ -0.03
CPNE1-227ENST00000498056 GPR182O15218 404 aa14.89□□□□□ -0.03
CPNE1-227ENST00000498056 KIF20AO95235 890 aa14.89□□□□□ -0.03
CPNE1-227ENST00000498056 PARNO95453 639 aaKnown RBP14.89□□□□□ -0.03
CPNE1-227ENST00000498056 HARSP12081 509 aaKnown RBP14.89□□□□□ -0.03
CPNE1-227ENST00000498056 IBSPP21815 317 aaPredicted RBP14.89□□□□□ -0.03
CPNE1-227ENST00000498056 BMP6P22004 513 aa14.89□□□□□ -0.03
CPNE1-227ENST00000498056 MATR3P43243 847 aaKnown RBP eCLIP14.89□□□□□ -0.03
CPNE1-227ENST00000498056 NLRP12P59046 1061 aa14.89□□□□□ -0.03
CPNE1-227ENST00000498056 TYRO3Q06418 890 aa14.89□□□□□ -0.03
CPNE1-227ENST00000498056 KCNA1Q09470 495 aa14.89□□□□□ -0.03
CPNE1-227ENST00000498056 AMHR2Q16671 573 aa14.89□□□□□ -0.03
CPNE1-227ENST00000498056 ZNF568Q3ZCX4 644 aa14.89□□□□□ -0.03
CPNE1-227ENST00000498056 USP38Q8NB14 1042 aa14.89□□□□□ -0.03
CPNE1-227ENST00000498056 GTPBP4Q9BZE4 634 aaKnown RBP14.89□□□□□ -0.03
CPNE1-227ENST00000498056 IKZF4Q9H2S9 585 aa14.89□□□□□ -0.03
CPNE1-227ENST00000498056 FZD8Q9H461 694 aa14.89□□□□□ -0.03
CPNE1-227ENST00000498056 ERVK-5Q9HDB9 667 aa14.89□□□□□ -0.03
CPNE1-227ENST00000498056 AGPAT5Q9NUQ2 364 aa14.89□□□□□ -0.03
CPNE1-227ENST00000498056 PADI3Q9ULW8 664 aa14.89□□□□□ -0.03
CPNE1-227ENST00000498056 ST3GAL5Q9UNP4 418 aa14.89□□□□□ -0.03
CPNE1-227ENST00000498056 KIAA1671Q9BY89 1806 aa14.89□□□□□ -0.03
CPNE1-227ENST00000498056 TTLL13PA6NNM8 815 aa14.88□□□□□ -0.03
CPNE1-227ENST00000498056 ACKR2O00590 384 aa14.88□□□□□ -0.03
CPNE1-227ENST00000498056 PSMA7O14818 248 aa14.88□□□□□ -0.03
CPNE1-227ENST00000498056 LETM1O95202 739 aaPredicted RBP14.88□□□□□ -0.03
CPNE1-227ENST00000498056 CSF2RAP15509 400 aa14.88□□□□□ -0.03
CPNE1-227ENST00000498056 ARF4P18085 180 aaPredicted RBP14.88□□□□□ -0.03
CPNE1-227ENST00000498056 RFC2P35250 354 aa14.88□□□□□ -0.03
CPNE1-227ENST00000498056 PRCPP42785 496 aa14.88□□□□□ -0.03
CPNE1-227ENST00000498056 FAM187BQ17R55 369 aa14.88□□□□□ -0.03
CPNE1-227ENST00000498056 BMT2Q1RMZ1 405 aa14.88□□□□□ -0.03
CPNE1-227ENST00000498056 ATF7IP2Q5U623 682 aa14.88□□□□□ -0.03
CPNE1-227ENST00000498056 CDR2LQ86X02 465 aaPredicted RBP14.88□□□□□ -0.03
CPNE1-227ENST00000498056 SEPT8Q92599 483 aa14.88□□□□□ -0.03
CPNE1-227ENST00000498056 BADQ92934 168 aa14.88□□□□□ -0.03
CPNE1-227ENST00000498056 TARS2Q9BW92 718 aaKnown RBP14.88□□□□□ -0.03
CPNE1-227ENST00000498056 STRA6Q9BX79 667 aa14.88□□□□□ -0.03
CPNE1-227ENST00000498056 TMEM206Q9H813 350 aa14.88□□□□□ -0.03
CPNE1-227ENST00000498056 DACH1Q9UI36 760 aa14.88□□□□□ -0.03
CPNE1-227ENST00000498056 PDE4DIPQ5VU43 2346 aa14.88□□□□□ -0.03
CPNE1-227ENST00000498056 TTC3P53804 2025 aa14.87□□□□□ -0.03
CPNE1-227ENST00000498056 TISP43B9A030 160 aa14.87□□□□□ -0.03
CPNE1-227ENST00000498056 CCDC192P0DO97 292 aa14.87□□□□□ -0.03
CPNE1-227ENST00000498056 CD44P16070 742 aaKnown RBP14.87□□□□□ -0.03
CPNE1-227ENST00000498056 PPP1R2P41236 205 aa14.87□□□□□ -0.03
CPNE1-227ENST00000498056 FPGSQ05932 587 aa14.87□□□□□ -0.03
CPNE1-227ENST00000498056 NCBP1Q09161 790 aaKnown RBP14.87□□□□□ -0.03
CPNE1-227ENST00000498056 PCBP1Q15365 356 aaKnown RBP eCLIP14.87□□□□□ -0.03
CPNE1-227ENST00000498056 TWF2Q6IBS0 349 aaKnown RBP14.87□□□□□ -0.03
CPNE1-227ENST00000498056 MFSD5Q6N075 450 aa14.87□□□□□ -0.03
CPNE1-227ENST00000498056 ARMCX5Q6P1M9 558 aa14.87□□□□□ -0.03
CPNE1-227ENST00000498056 NOTUMQ6P988 496 aa14.87□□□□□ -0.03
CPNE1-227ENST00000498056 HS2ST1Q7LGA3 356 aa14.87□□□□□ -0.03
CPNE1-227ENST00000498056 GUF1Q8N442 669 aaKnown RBP14.87□□□□□ -0.03
CPNE1-227ENST00000498056 ZNF507Q8TCN5 953 aa14.87□□□□□ -0.03
CPNE1-227ENST00000498056 LBHD1Q9BQE6 289 aaPredicted RBP14.87□□□□□ -0.03
CPNE1-227ENST00000498056 ADPGKQ9BRR6 497 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms