RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 CFAP100Q494V2 611 aa5.87□□□□□ -1.47
SMC4-227ENST00000497984 PLEKHG4Q58EX7 1191 aa5.87□□□□□ -1.47
SMC4-227ENST00000497984 PRIMA1Q86XR5 153 aa5.87□□□□□ -1.47
SMC4-227ENST00000497984 CPPED1Q9BRF8 314 aaPredicted RBP5.87□□□□□ -1.47
SMC4-227ENST00000497984 LSM14BQ9BX40 385 aaKnown RBP5.87□□□□□ -1.47
SMC4-227ENST00000497984 KCNH6Q9H252 994 aa5.87□□□□□ -1.47
SMC4-227ENST00000497984 MYPNQ86TC9 1320 aa5.87□□□□□ -1.47
SMC4-227ENST00000497984 RFPL3O75679 317 aa5.86□□□□□ -1.47
SMC4-227ENST00000497984 LY86O95711 162 aa5.86□□□□□ -1.47
SMC4-227ENST00000497984 NUDT3O95989 172 aa5.86□□□□□ -1.47
SMC4-227ENST00000497984 CASRP41180 1078 aa5.86□□□□□ -1.47
SMC4-227ENST00000497984 MRPL49Q13405 166 aaKnown RBP5.86□□□□□ -1.47
SMC4-227ENST00000497984 VPS72Q15906 364 aa5.86□□□□□ -1.47
SMC4-227ENST00000497984 FDXACB1Q9BRP7 624 aaPredicted RBP5.86□□□□□ -1.47
SMC4-227ENST00000497984 CENPVL1A0A0U1RR11 272 aa5.85□□□□□ -1.47
SMC4-227ENST00000497984 FAM83GA6ND36 823 aa5.85□□□□□ -1.47
SMC4-227ENST00000497984 RECQL4O94761 1208 aa5.85□□□□□ -1.47
SMC4-227ENST00000497984 SEC24DO94855 1032 aaPredicted RBP5.85□□□□□ -1.47
SMC4-227ENST00000497984 PCDH8O95206 1070 aa5.85□□□□□ -1.47
SMC4-227ENST00000497984 GYPEP15421 78 aa5.85□□□□□ -1.47
SMC4-227ENST00000497984 FAM189BP81408 668 aa5.85□□□□□ -1.47
SMC4-227ENST00000497984 DSG1Q02413 1049 aa5.85□□□□□ -1.47
SMC4-227ENST00000497984 PABPC4Q13310 644 aaKnown RBP eCLIP5.85□□□□□ -1.478e-9■■■■■ 603.5
SMC4-227ENST00000497984 LRRC32Q14392 662 aa5.85□□□□□ -1.47
SMC4-227ENST00000497984 TIGD2Q4W5G0 525 aa5.85□□□□□ -1.47
SMC4-227ENST00000497984 ZBTB41Q5SVQ8 909 aa5.85□□□□□ -1.47
SMC4-227ENST00000497984 HECTD2Q5U5R9 776 aa5.85□□□□□ -1.47
SMC4-227ENST00000497984 BEND2Q8NDZ0 799 aa5.85□□□□□ -1.47
SMC4-227ENST00000497984 NTN5Q8WTR8 489 aaPredicted RBP5.85□□□□□ -1.47
SMC4-227ENST00000497984 MYEOVQ96EZ4 313 aa5.85□□□□□ -1.47
SMC4-227ENST00000497984 TOR3AQ9H497 397 aa5.85□□□□□ -1.47
SMC4-227ENST00000497984 PODXL2Q9NZ53 605 aa5.85□□□□□ -1.47
SMC4-227ENST00000497984 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.85□□□□□ -1.475e-7■■■■□ 23.7
SMC4-227ENST00000497984 PCDHB6Q9Y5E3 794 aa5.85□□□□□ -1.47
SMC4-227ENST00000497984 B3GALT2O43825 422 aa5.84□□□□□ -1.47
SMC4-227ENST00000497984 LPXNO60711 386 aa5.84□□□□□ -1.47
SMC4-227ENST00000497984 DNAJC6O75061 913 aa5.84□□□□□ -1.47
SMC4-227ENST00000497984 WNT3AP56704 352 aa5.84□□□□□ -1.47
SMC4-227ENST00000497984 HNRNPA0Q13151 305 aaKnown RBP5.84□□□□□ -1.47
SMC4-227ENST00000497984 CCDC142Q17RM4 750 aa5.84□□□□□ -1.47
SMC4-227ENST00000497984 DOK3Q7L591 496 aa5.84□□□□□ -1.47
SMC4-227ENST00000497984 FAM83AQ86UY5 434 aa5.84□□□□□ -1.47
SMC4-227ENST00000497984 KIF18BQ86Y91 864 aa5.84□□□□□ -1.47
SMC4-227ENST00000497984 MSL3Q8N5Y2 521 aaKnown RBP5.84□□□□□ -1.47
SMC4-227ENST00000497984 LILRA3Q8N6C8 439 aaPredicted RBP5.84□□□□□ -1.47
SMC4-227ENST00000497984 EFHBQ8N7U6 833 aa5.84□□□□□ -1.47
SMC4-227ENST00000497984 CDYL2Q8N8U2 506 aa5.84□□□□□ -1.47
SMC4-227ENST00000497984 GLB1L3Q8NCI6 653 aaPredicted RBP5.84□□□□□ -1.47
SMC4-227ENST00000497984 OR5M3Q8NGP4 307 aa5.84□□□□□ -1.47
SMC4-227ENST00000497984 SH3TC2Q8TF17 1288 aa5.84□□□□□ -1.47
SMC4-227ENST00000497984 ZNF496Q96IT1 587 aaPredicted RBP5.84□□□□□ -1.47
SMC4-227ENST00000497984 DNAJC2Q99543 621 aaKnown RBP5.84□□□□□ -1.47
SMC4-227ENST00000497984 NDC1Q9BTX1 674 aa5.84□□□□□ -1.47
SMC4-227ENST00000497984 SLC46A2Q9BY10 475 aa5.84□□□□□ -1.47
SMC4-227ENST00000497984 SYNPO2LQ9H987 977 aa5.84□□□□□ -1.47
SMC4-227ENST00000497984 INTS7Q9NVH2 962 aaKnown RBP5.84□□□□□ -1.47
SMC4-227ENST00000497984 MAGEC2Q9UBF1 373 aaPredicted RBP5.84□□□□□ -1.47
SMC4-227ENST00000497984 TGM5O43548 720 aa5.83□□□□□ -1.48
SMC4-227ENST00000497984 F2P00734 622 aa5.83□□□□□ -1.48
SMC4-227ENST00000497984 PFKMP08237 780 aa5.83□□□□□ -1.48
SMC4-227ENST00000497984 LAG3P18627 525 aa5.83□□□□□ -1.48
SMC4-227ENST00000497984 CD40P25942 277 aa5.83□□□□□ -1.48
SMC4-227ENST00000497984 APOBEC3AP31941 199 aaPredicted RBP5.83□□□□□ -1.48
SMC4-227ENST00000497984 BMS1Q14692 1282 aaKnown RBP5.83□□□□□ -1.48
SMC4-227ENST00000497984 SF3A1Q15459 793 aaKnown RBP5.83□□□□□ -1.48
SMC4-227ENST00000497984 NFE2L2Q16236 605 aa5.83□□□□□ -1.48
SMC4-227ENST00000497984 Q6YL49 198 aa5.83□□□□□ -1.48
SMC4-227ENST00000497984 TAS1R1Q7RTX1 841 aa5.83□□□□□ -1.48
SMC4-227ENST00000497984 GPRIN1Q7Z2K8 1008 aa5.83□□□□□ -1.48
SMC4-227ENST00000497984 NXPE1Q8N323 547 aa5.83□□□□□ -1.48
SMC4-227ENST00000497984 IL17RAQ96F46 866 aa5.83□□□□□ -1.48
SMC4-227ENST00000497984 ZNF764Q96H86 408 aaPredicted RBP5.83□□□□□ -1.48
SMC4-227ENST00000497984 TMEM260Q9NX78 707 aa5.83□□□□□ -1.48
SMC4-227ENST00000497984 ZNHIT2Q9UHR6 403 aa5.83□□□□□ -1.48
SMC4-227ENST00000497984 EIF2B4Q9UI10 523 aaKnown RBP5.83□□□□□ -1.48
SMC4-227ENST00000497984 ZKSCAN5Q9Y2L8 839 aa5.83□□□□□ -1.48
SMC4-227ENST00000497984 TMEM200CA6NKL6 621 aa5.82□□□□□ -1.48
SMC4-227ENST00000497984 ZNF891A8MT65 544 aaPredicted RBP5.82□□□□□ -1.48
SMC4-227ENST00000497984 ASMTLO95671 621 aa5.82□□□□□ -1.48
SMC4-227ENST00000497984 ZEB1P37275 1124 aaPredicted RBP5.82□□□□□ -1.48
SMC4-227ENST00000497984 IL12RB1P42701 662 aa5.82□□□□□ -1.48
SMC4-227ENST00000497984 GZMKP49863 264 aa5.82□□□□□ -1.48
SMC4-227ENST00000497984 CSRP2Q16527 193 aa5.82□□□□□ -1.48
SMC4-227ENST00000497984 IQSEC1Q6DN90 963 aa5.82□□□□□ -1.48
SMC4-227ENST00000497984 ESPNLQ6ZVH7 1005 aa5.82□□□□□ -1.48
SMC4-227ENST00000497984 CHTF18Q8WVB6 975 aa5.82□□□□□ -1.48
SMC4-227ENST00000497984 BBC3Q96PG8 261 aaPredicted RBP5.82□□□□□ -1.48
SMC4-227ENST00000497984 MTFR1LQ9H019 292 aa5.82□□□□□ -1.48
SMC4-227ENST00000497984 EPC1Q9H2F5 836 aa5.82□□□□□ -1.48
SMC4-227ENST00000497984 USP36Q9P275 1121 aaKnown RBP5.82□□□□□ -1.48
SMC4-227ENST00000497984 DKK2Q9UBU2 259 aa5.82□□□□□ -1.48
SMC4-227ENST00000497984 CHST2Q9Y4C5 530 aa5.82□□□□□ -1.48
SMC4-227ENST00000497984 A0A1W2PR48 441 aa5.81□□□□□ -1.48
SMC4-227ENST00000497984 ZAR1LA6NP61 321 aa5.81□□□□□ -1.48
SMC4-227ENST00000497984 LEFTY2O00292 366 aa5.81□□□□□ -1.48
SMC4-227ENST00000497984 POU3F2P20265 443 aaPredicted RBP5.81□□□□□ -1.48
SMC4-227ENST00000497984 OLFML1Q6UWY5 402 aa5.81□□□□□ -1.48
SMC4-227ENST00000497984 FAM193BQ96PV7 902 aaPredicted RBP5.81□□□□□ -1.48
SMC4-227ENST00000497984 SERHL2Q9H4I8 314 aa5.81□□□□□ -1.48
SMC4-227ENST00000497984 RIOX1Q9H6W3 641 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms