RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 TSPAN1O60635 241 aa16.98■□□□□ 0.31
NUP50-219ENST00000497960 ZSCAN22P10073 491 aaPredicted RBP16.98■□□□□ 0.31
NUP50-219ENST00000497960 ALDH7A1P49419 539 aaKnown RBP16.98■□□□□ 0.31
NUP50-219ENST00000497960 RNASELQ05823 741 aaKnown RBP16.98■□□□□ 0.31
NUP50-219ENST00000497960 MBTD1Q05BQ5 628 aa16.98■□□□□ 0.31
NUP50-219ENST00000497960 COL19A1Q14993 1142 aa16.98■□□□□ 0.31
NUP50-219ENST00000497960 PUS10Q3MIT2 529 aaKnown RBP16.98■□□□□ 0.31
NUP50-219ENST00000497960 NOMO2Q5JPE7 1267 aa16.98■□□□□ 0.31
NUP50-219ENST00000497960 PDE12Q6L8Q7 609 aaKnown RBP16.98■□□□□ 0.31
NUP50-219ENST00000497960 ZBTB8OSQ8IWT0 167 aa16.98■□□□□ 0.31
NUP50-219ENST00000497960 CNNM3Q8NE01 707 aa16.98■□□□□ 0.31
NUP50-219ENST00000497960 URGCPQ8TCY9 931 aa16.98■□□□□ 0.31
NUP50-219ENST00000497960 MRPS27Q92552 414 aaKnown RBP16.98■□□□□ 0.31
NUP50-219ENST00000497960 BHMT2Q9H2M3 363 aa16.98■□□□□ 0.31
NUP50-219ENST00000497960 DDX19AQ9NUU7 478 aaKnown RBP16.98■□□□□ 0.31
NUP50-219ENST00000497960 CNTNAP2Q9UHC6 1331 aa16.97■□□□□ 0.31
NUP50-219ENST00000497960 H3BQ06 376 aaPredicted RBP16.97■□□□□ 0.31
NUP50-219ENST00000497960 OFD1O75665 1012 aa16.97■□□□□ 0.31
NUP50-219ENST00000497960 F13A1P00488 732 aa16.97■□□□□ 0.31
NUP50-219ENST00000497960 PBX3P40426 434 aa16.97■□□□□ 0.31
NUP50-219ENST00000497960 ATP2C1P98194 919 aaPredicted RBP16.97■□□□□ 0.31
NUP50-219ENST00000497960 PKP1Q13835 747 aa16.97■□□□□ 0.31
NUP50-219ENST00000497960 ECM1Q16610 540 aa16.97■□□□□ 0.31
NUP50-219ENST00000497960 UBXN11Q5T124 520 aa16.97■□□□□ 0.31
NUP50-219ENST00000497960 PTCRAQ6ISU1 281 aaPredicted RBP16.97■□□□□ 0.31
NUP50-219ENST00000497960 MRPL10Q7Z7H8 261 aaKnown RBP16.97■□□□□ 0.31
NUP50-219ENST00000497960 CPB2Q96IY4 423 aa16.97■□□□□ 0.31
NUP50-219ENST00000497960 NECAB3Q96P71 396 aaPredicted RBP16.97■□□□□ 0.31
NUP50-219ENST00000497960 C2orf40Q9H1Z8 148 aa16.97■□□□□ 0.31
NUP50-219ENST00000497960 ZSCAN16Q9H4T2 348 aaPredicted RBP16.97■□□□□ 0.31
NUP50-219ENST00000497960 RSAD1Q9HA92 442 aa16.97■□□□□ 0.31
NUP50-219ENST00000497960 UBN1Q9NPG3 1134 aa16.97■□□□□ 0.31
NUP50-219ENST00000497960 KANSL3Q9P2N6 904 aa16.97■□□□□ 0.31
NUP50-219ENST00000497960 DNM3Q9UQ16 869 aa16.97■□□□□ 0.31
NUP50-219ENST00000497960 FAM50BQ9Y247 325 aa16.97■□□□□ 0.31
NUP50-219ENST00000497960 VCANP13611 3396 aa16.97■□□□□ 0.31
NUP50-219ENST00000497960 MEIS3P2A8K0S8 358 aa16.96■□□□□ 0.31
NUP50-219ENST00000497960 ZC3H11AO75152 810 aaKnown RBP eCLIP16.96■□□□□ 0.31
NUP50-219ENST00000497960 ITGA4P13612 1032 aa16.96■□□□□ 0.31
NUP50-219ENST00000497960 NCLP19338 710 aaKnown RBP16.96■□□□□ 0.31
NUP50-219ENST00000497960 BCAR1P56945 870 aa16.96■□□□□ 0.31
NUP50-219ENST00000497960 PPP2R5AQ15172 486 aa16.96■□□□□ 0.31
NUP50-219ENST00000497960 IL17AQ16552 155 aa16.96■□□□□ 0.31
NUP50-219ENST00000497960 CTC1Q2NKJ3 1217 aa16.96■□□□□ 0.31
NUP50-219ENST00000497960 AGMOQ6ZNB7 445 aa16.96■□□□□ 0.31
NUP50-219ENST00000497960 ADGRD2Q7Z7M1 963 aa16.96■□□□□ 0.31
NUP50-219ENST00000497960 HACE1Q8IYU2 909 aa16.96■□□□□ 0.31
NUP50-219ENST00000497960 SLC39A11Q8N1S5 342 aa16.96■□□□□ 0.31
NUP50-219ENST00000497960 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.96■□□□□ 0.31
NUP50-219ENST00000497960 DEPTORQ8TB45 409 aa16.96■□□□□ 0.31
NUP50-219ENST00000497960 TRIM6Q9C030 488 aaPredicted RBP16.96■□□□□ 0.31
NUP50-219ENST00000497960 CSRNP2Q9H175 543 aa16.96■□□□□ 0.31
NUP50-219ENST00000497960 TLE6Q9H808 572 aa16.96■□□□□ 0.31
NUP50-219ENST00000497960 ENTPD7Q9NQZ7 604 aa16.96■□□□□ 0.31
NUP50-219ENST00000497960 TBC1D13Q9NVG8 400 aa16.96■□□□□ 0.31
NUP50-219ENST00000497960 PRMT7Q9NVM4 692 aaPredicted RBP16.96■□□□□ 0.31
NUP50-219ENST00000497960 PP2D1A8MPX8 630 aa16.95■□□□□ 0.3
NUP50-219ENST00000497960 ARF4P18085 180 aaPredicted RBP16.95■□□□□ 0.3
NUP50-219ENST00000497960 GTF2F1P35269 517 aaKnown RBP eCLIP16.95■□□□□ 0.34e-6■■■■□ 25.2
NUP50-219ENST00000497960 NRIP1P48552 1158 aa16.95■□□□□ 0.3
NUP50-219ENST00000497960 NDUFV1P49821 464 aa16.95■□□□□ 0.3
NUP50-219ENST00000497960 ERVFC1P60507 584 aa16.95■□□□□ 0.3
NUP50-219ENST00000497960 BMS1Q14692 1282 aaKnown RBP16.95■□□□□ 0.3
NUP50-219ENST00000497960 ZRSR1Q15695 479 aaKnown RBP16.95■□□□□ 0.3
NUP50-219ENST00000497960 AMHR2Q16671 573 aa16.95■□□□□ 0.3
NUP50-219ENST00000497960 ARL6IP4Q66PJ3 421 aaKnown RBP16.95■□□□□ 0.3
NUP50-219ENST00000497960 RBM23Q86U06 439 aaKnown RBP16.95■□□□□ 0.3
NUP50-219ENST00000497960 EFHBQ8N7U6 833 aa16.95■□□□□ 0.3
NUP50-219ENST00000497960 KIFAP3Q92845 792 aa16.95■□□□□ 0.3
NUP50-219ENST00000497960 TMEM169Q96HH4 297 aa16.95■□□□□ 0.3
NUP50-219ENST00000497960 IFT74Q96LB3 600 aa16.95■□□□□ 0.3
NUP50-219ENST00000497960 PRIMPOLQ96LW4 560 aa16.95■□□□□ 0.3
NUP50-219ENST00000497960 FAM193BQ96PV7 902 aaPredicted RBP16.95■□□□□ 0.3
NUP50-219ENST00000497960 TCF25Q9BQ70 676 aa16.95■□□□□ 0.3
NUP50-219ENST00000497960 EIF2AQ9BY44 585 aaKnown RBP16.95■□□□□ 0.3
NUP50-219ENST00000497960 GBP3Q9H0R5 595 aa16.95■□□□□ 0.3
NUP50-219ENST00000497960 NGRNQ9NPE2 291 aaKnown RBP16.95■□□□□ 0.3
NUP50-219ENST00000497960 IPPQ9Y573 584 aa16.95■□□□□ 0.3
NUP50-219ENST00000497960 PCDHGC5Q9Y5F6 944 aa16.95■□□□□ 0.3
NUP50-219ENST00000497960 FSD2A1L4K1 749 aa16.94■□□□□ 0.3
NUP50-219ENST00000497960 VWA3AA6NCI4 1184 aa16.94■□□□□ 0.3
NUP50-219ENST00000497960 NT5C1B-RDH14C9J2C7 533 aa16.94■□□□□ 0.3
NUP50-219ENST00000497960 FSCN2O14926 492 aa16.94■□□□□ 0.3
NUP50-219ENST00000497960 B4GALT5O43286 388 aa16.94■□□□□ 0.3
NUP50-219ENST00000497960 EYA4O95677 639 aa16.94■□□□□ 0.3
NUP50-219ENST00000497960 BMP15O95972 392 aa16.94■□□□□ 0.3
NUP50-219ENST00000497960 CDC25AP30304 524 aa16.94■□□□□ 0.3
NUP50-219ENST00000497960 LTBRP36941 435 aa16.94■□□□□ 0.3
NUP50-219ENST00000497960 NAMPTP43490 491 aa16.94■□□□□ 0.3
NUP50-219ENST00000497960 ADAM15Q13444 863 aa16.94■□□□□ 0.3
NUP50-219ENST00000497960 MAPK6Q16659 721 aa16.94■□□□□ 0.3
NUP50-219ENST00000497960 TMEM132AQ24JP5 1023 aa16.94■□□□□ 0.3
NUP50-219ENST00000497960 PLPP4Q5VZY2 271 aa16.94■□□□□ 0.3
NUP50-219ENST00000497960 CDCA2Q69YH5 1023 aaPredicted RBP16.94■□□□□ 0.3
NUP50-219ENST00000497960 PPP4R3CPQ6ZMV5 832 aa16.94■□□□□ 0.3
NUP50-219ENST00000497960 TMC7Q7Z402 723 aa16.94■□□□□ 0.3
NUP50-219ENST00000497960 SMG8Q8ND04 991 aaKnown RBP16.94■□□□□ 0.3
NUP50-219ENST00000497960 BSNDQ8WZ55 320 aa16.94■□□□□ 0.3
NUP50-219ENST00000497960 CDCA3Q99618 268 aaPredicted RBP16.94■□□□□ 0.3
NUP50-219ENST00000497960 NRDE2Q9H7Z3 1164 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms