RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 RPUSD2Q8IZ73 545 aaKnown RBP22.08■■□□□ 1.13
CTSD-206ENST00000497544 GPT2Q8TD30 523 aa22.08■■□□□ 1.13
CTSD-206ENST00000497544 NTPCRQ9BSD7 190 aaKnown RBP22.08■■□□□ 1.13
CTSD-206ENST00000497544 INO80B-WBP1J3KQ70 363 aa22.07■■□□□ 1.12
CTSD-206ENST00000497544 GPR182O15218 404 aa22.07■■□□□ 1.12
CTSD-206ENST00000497544 SLC16A4O15374 487 aa22.07■■□□□ 1.12
CTSD-206ENST00000497544 SMC2O95347 1197 aa22.07■■□□□ 1.12
CTSD-206ENST00000497544 CSF2RAP15509 400 aa22.07■■□□□ 1.12
CTSD-206ENST00000497544 DPYDQ12882 1025 aa22.07■■□□□ 1.12
CTSD-206ENST00000497544 NFX1Q12986 1120 aaKnown RBP22.07■■□□□ 1.12
CTSD-206ENST00000497544 COASYQ13057 564 aa22.07■■□□□ 1.12
CTSD-206ENST00000497544 PNOCQ13519 176 aa22.07■■□□□ 1.12
CTSD-206ENST00000497544 LPIN1Q14693 890 aa22.07■■□□□ 1.12
CTSD-206ENST00000497544 TSHZ1Q6ZSZ6 1077 aa22.07■■□□□ 1.12
CTSD-206ENST00000497544 DEFB128Q7Z7B8 93 aa22.07■■□□□ 1.12
CTSD-206ENST00000497544 IFNLR1Q8IU57 520 aaPredicted RBP22.07■■□□□ 1.12
CTSD-206ENST00000497544 FAM178BQ8IXR5 827 aa22.07■■□□□ 1.12
CTSD-206ENST00000497544 TMEM40Q8WWA1 233 aa22.07■■□□□ 1.12
CTSD-206ENST00000497544 KHSRPQ92945 711 aaKnown RBP eCLIP22.07■■□□□ 1.12
CTSD-206ENST00000497544 NFKBIZQ9BYH8 718 aa22.07■■□□□ 1.12
CTSD-206ENST00000497544 NOC2LQ9Y3T9 749 aaKnown RBP22.07■■□□□ 1.12
CTSD-206ENST00000497544 SCN5AQ14524 2016 aa22.07■■□□□ 1.12
CTSD-206ENST00000497544 FRMD3A2A2Y4 597 aa22.06■■□□□ 1.12
CTSD-206ENST00000497544 H0YCG3 227 aa22.06■■□□□ 1.12
CTSD-206ENST00000497544 K7ERI5 159 aa22.06■■□□□ 1.12
CTSD-206ENST00000497544 NBNO60934 754 aa22.06■■□□□ 1.12
CTSD-206ENST00000497544 CSDE1O75534 798 aaKnown RBP22.06■■□□□ 1.12
CTSD-206ENST00000497544 RPN1P04843 607 aaKnown RBP22.06■■□□□ 1.12
CTSD-206ENST00000497544 EFNA5P52803 228 aa22.06■■□□□ 1.12
CTSD-206ENST00000497544 PPIGQ13427 754 aaKnown RBP eCLIP22.06■■□□□ 1.12
CTSD-206ENST00000497544 MBTPS1Q14703 1052 aa22.06■■□□□ 1.12
CTSD-206ENST00000497544 KIFC3Q9BVG8 833 aa22.06■■□□□ 1.12
CTSD-206ENST00000497544 TSPYL2Q9H2G4 693 aaPredicted RBP22.06■■□□□ 1.12
CTSD-206ENST00000497544 MRPL44Q9H9J2 332 aaKnown RBP22.06■■□□□ 1.12
CTSD-206ENST00000497544 EXOC1Q9NV70 894 aa22.06■■□□□ 1.12
CTSD-206ENST00000497544 TBC1D7Q9P0N9 293 aa22.06■■□□□ 1.12
CTSD-206ENST00000497544 ST3GAL5Q9UNP4 418 aa22.06■■□□□ 1.12
CTSD-206ENST00000497544 CACNA1AO00555 2505 aa22.06■■□□□ 1.12
CTSD-206ENST00000497544 K7ENM7 598 aa22.05■■□□□ 1.12
CTSD-206ENST00000497544 MAPTP10636 758 aaKnown RBP22.05■■□□□ 1.12
CTSD-206ENST00000497544 SFPQP23246 707 aaKnown RBP eCLIP22.05■■□□□ 1.12
CTSD-206ENST00000497544 PAK2Q13177 524 aa22.05■■□□□ 1.12
CTSD-206ENST00000497544 GPNMBQ14956 572 aa22.05■■□□□ 1.12
CTSD-206ENST00000497544 CAMK4Q16566 473 aa22.05■■□□□ 1.12
CTSD-206ENST00000497544 MAPK6Q16659 721 aa22.05■■□□□ 1.12
CTSD-206ENST00000497544 KMT5BQ4FZB7 885 aa22.05■■□□□ 1.12
CTSD-206ENST00000497544 CDCA2Q69YH5 1023 aaPredicted RBP22.05■■□□□ 1.12
CTSD-206ENST00000497544 CATSPER4Q7RTX7 472 aa22.05■■□□□ 1.12
CTSD-206ENST00000497544 HAUS6Q7Z4H7 955 aa22.05■■□□□ 1.12
CTSD-206ENST00000497544 SMARCE1Q969G3 411 aa22.05■■□□□ 1.12
CTSD-206ENST00000497544 OSBPL7Q9BZF2 842 aa22.05■■□□□ 1.12
CTSD-206ENST00000497544 TMEM134Q9H6X4 195 aa22.05■■□□□ 1.12
CTSD-206ENST00000497544 AGO3Q9H9G7 860 aaKnown RBP22.05■■□□□ 1.12
CTSD-206ENST00000497544 TET1Q8NFU7 2136 aa22.04■■□□□ 1.12
CTSD-206ENST00000497544 KLRC4O43908 158 aa22.04■■□□□ 1.12
CTSD-206ENST00000497544 ERLIN2O94905 339 aa22.04■■□□□ 1.12
CTSD-206ENST00000497544 CXCL10P02778 98 aa22.04■■□□□ 1.12
CTSD-206ENST00000497544 PFKMP08237 780 aa22.04■■□□□ 1.12
CTSD-206ENST00000497544 FGFR4P22455 802 aa22.04■■□□□ 1.12
CTSD-206ENST00000497544 NMT1P30419 496 aaKnown RBP22.04■■□□□ 1.12
CTSD-206ENST00000497544 CD52P31358 61 aa22.04■■□□□ 1.12
CTSD-206ENST00000497544 NCKAP1LP55160 1127 aa22.04■■□□□ 1.12
CTSD-206ENST00000497544 NCBP1Q09161 790 aaKnown RBP22.04■■□□□ 1.12
CTSD-206ENST00000497544 PSMD2Q13200 908 aa22.04■■□□□ 1.12
CTSD-206ENST00000497544 ZNF720Q7Z2F6 126 aa22.04■■□□□ 1.12
CTSD-206ENST00000497544 FAM228AQ86W67 206 aa22.04■■□□□ 1.12
CTSD-206ENST00000497544 SEPT8Q92599 483 aa22.04■■□□□ 1.12
CTSD-206ENST00000497544 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.04■■□□□ 1.12
CTSD-206ENST00000497544 IFIH1Q9BYX4 1025 aaKnown RBP22.04■■□□□ 1.12
CTSD-206ENST00000497544 NUP62CLQ9H1M0 184 aa22.04■■□□□ 1.12
CTSD-206ENST00000497544 CLSTN2Q9H4D0 955 aa22.04■■□□□ 1.12
CTSD-206ENST00000497544 MINDY3Q9H8M7 445 aa22.04■■□□□ 1.12
CTSD-206ENST00000497544 IL23AQ9NPF7 189 aa22.04■■□□□ 1.12
CTSD-206ENST00000497544 OLFML3Q9NRN5 406 aa22.04■■□□□ 1.12
CTSD-206ENST00000497544 ARHGAP28Q9P2N2 729 aa22.04■■□□□ 1.12
CTSD-206ENST00000497544 PADI3Q9ULW8 664 aa22.04■■□□□ 1.12
CTSD-206ENST00000497544 PCDHA5Q9Y5H7 936 aa22.04■■□□□ 1.12
CTSD-206ENST00000497544 TANC1Q9C0D5 1861 aa22.04■■□□□ 1.12
CTSD-206ENST00000497544 PHLPP2Q6ZVD8 1323 aa22.04■■□□□ 1.12
CTSD-206ENST00000497544 ADGRA3Q8IWK6 1321 aa22.04■■□□□ 1.12
CTSD-206ENST00000497544 DENND3A2RUS2 1198 aa22.03■■□□□ 1.12
CTSD-206ENST00000497544 SCP2P22307 547 aa22.03■■□□□ 1.12
CTSD-206ENST00000497544 ABCD1P33897 745 aa22.03■■□□□ 1.12
CTSD-206ENST00000497544 MBTD1Q05BQ5 628 aa22.03■■□□□ 1.12
CTSD-206ENST00000497544 STRN3Q13033 797 aa22.03■■□□□ 1.12
CTSD-206ENST00000497544 PCBP1Q15365 356 aaKnown RBP eCLIP22.03■■□□□ 1.122e-11■□□□□ 9.7
CTSD-206ENST00000497544 AAK1Q2M2I8 961 aa22.03■■□□□ 1.12
CTSD-206ENST00000497544 PLEKHG4Q58EX7 1191 aa22.03■■□□□ 1.12
CTSD-206ENST00000497544 FAM26FQ5R3K3 315 aa22.03■■□□□ 1.12
CTSD-206ENST00000497544 STXBP4Q6ZWJ1 553 aa22.03■■□□□ 1.12
CTSD-206ENST00000497544 TMEM161BQ8NDZ6 487 aa22.03■■□□□ 1.12
CTSD-206ENST00000497544 DBF4BQ8NFT6 615 aa22.03■■□□□ 1.12
CTSD-206ENST00000497544 ERCC4Q92889 916 aaPredicted RBP22.03■■□□□ 1.12
CTSD-206ENST00000497544 GSDMAQ96QA5 445 aa22.03■■□□□ 1.12
CTSD-206ENST00000497544 ERVK-5Q9HDB9 667 aa22.03■■□□□ 1.12
CTSD-206ENST00000497544 PRMT7Q9NVM4 692 aaPredicted RBP22.03■■□□□ 1.12
CTSD-206ENST00000497544 SIP14410 1827 aa22.03■■□□□ 1.12
CTSD-206ENST00000497544 GCNT3O95395 438 aa22.02■■□□□ 1.12
CTSD-206ENST00000497544 PRKCBP05771 671 aa22.02■■□□□ 1.12
CTSD-206ENST00000497544 ACRP10323 421 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms