RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 CYP7A1P22680 504 aa6.98□□□□□ -1.29
BRCA1-224ENST00000497488 LGALS4P56470 323 aa6.98□□□□□ -1.29
BRCA1-224ENST00000497488 CDK17Q00537 523 aa6.98□□□□□ -1.29
BRCA1-224ENST00000497488 TLE2Q04725 743 aa6.98□□□□□ -1.29
BRCA1-224ENST00000497488 MALLQ13021 153 aa6.98□□□□□ -1.29
BRCA1-224ENST00000497488 TUSC3Q13454 348 aa6.98□□□□□ -1.29
BRCA1-224ENST00000497488 IL10RAQ13651 578 aa6.98□□□□□ -1.29
BRCA1-224ENST00000497488 SPARCL1Q14515 664 aa6.98□□□□□ -1.29
BRCA1-224ENST00000497488 RTP2Q5QGT7 225 aa6.98□□□□□ -1.29
BRCA1-224ENST00000497488 CATSPEREQ5SY80 951 aa6.98□□□□□ -1.29
BRCA1-224ENST00000497488 KIAA1614Q5VZ46 1190 aa6.98□□□□□ -1.29
BRCA1-224ENST00000497488 KLHDC10Q6PID8 442 aa6.98□□□□□ -1.29
BRCA1-224ENST00000497488 MOGAT3Q86VF5 341 aa6.98□□□□□ -1.29
BRCA1-224ENST00000497488 CPNE8Q86YQ8 564 aa6.98□□□□□ -1.29
BRCA1-224ENST00000497488 CPOQ8IVL8 374 aa6.98□□□□□ -1.29
BRCA1-224ENST00000497488 TXLNBQ8N3L3 684 aa6.98□□□□□ -1.29
BRCA1-224ENST00000497488 ZNF655Q8N720 491 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-224ENST00000497488 C7orf31Q8N865 590 aa6.98□□□□□ -1.29
BRCA1-224ENST00000497488 ANKRD52Q8NB46 1076 aa6.98□□□□□ -1.29
BRCA1-224ENST00000497488 HERVK_113Q902F9 699 aa6.98□□□□□ -1.29
BRCA1-224ENST00000497488 HTRA1Q92743 480 aa6.98□□□□□ -1.29
BRCA1-224ENST00000497488 HDAC10Q969S8 669 aa6.98□□□□□ -1.29
BRCA1-224ENST00000497488 MAELQ96JY0 434 aaKnown RBP6.98□□□□□ -1.29
BRCA1-224ENST00000497488 Q96M66 194 aa6.98□□□□□ -1.29
BRCA1-224ENST00000497488 HEPHQ9BQS7 1158 aa6.98□□□□□ -1.29
BRCA1-224ENST00000497488 SDF4Q9BRK5 362 aa6.98□□□□□ -1.29
BRCA1-224ENST00000497488 PYM1Q9BRP8 204 aaKnown RBP6.98□□□□□ -1.29
BRCA1-224ENST00000497488 POFUT1Q9H488 388 aa6.98□□□□□ -1.29
BRCA1-224ENST00000497488 MYO1AQ9UBC5 1043 aa6.98□□□□□ -1.29
BRCA1-224ENST00000497488 GIMAP2Q9UG22 337 aa6.98□□□□□ -1.29
BRCA1-224ENST00000497488 ADGRE2Q9UHX3 823 aa6.98□□□□□ -1.29
BRCA1-224ENST00000497488 URB2Q14146 1524 aaKnown RBP6.97□□□□□ -1.29
BRCA1-224ENST00000497488 A0A1W2PPL8 197 aa6.97□□□□□ -1.29
BRCA1-224ENST00000497488 WTIPA6NIX2 430 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-224ENST00000497488 H3BM21 787 aa6.97□□□□□ -1.29
BRCA1-224ENST00000497488 ZNF205O95201 554 aa6.97□□□□□ -1.29
BRCA1-224ENST00000497488 TIAF1O95411 115 aa6.97□□□□□ -1.29
BRCA1-224ENST00000497488 BRAFP15056 766 aa6.97□□□□□ -1.29
BRCA1-224ENST00000497488 CTSSP25774 331 aa6.97□□□□□ -1.29
BRCA1-224ENST00000497488 SLC7A1P30825 629 aa6.97□□□□□ -1.29
BRCA1-224ENST00000497488 STAT1P42224 750 aa6.97□□□□□ -1.29
BRCA1-224ENST00000497488 DRG2P55039 364 aaKnown RBP6.97□□□□□ -1.29
BRCA1-224ENST00000497488 CREMQ03060 361 aa6.97□□□□□ -1.29
BRCA1-224ENST00000497488 CIAPIN1Q6FI81 312 aa6.97□□□□□ -1.29
BRCA1-224ENST00000497488 CYP4F22Q6NT55 531 aa6.97□□□□□ -1.29
BRCA1-224ENST00000497488 PHYKPLQ8IUZ5 450 aa6.97□□□□□ -1.29
BRCA1-224ENST00000497488 LYSMD2Q8IV50 215 aa6.97□□□□□ -1.29
BRCA1-224ENST00000497488 ATP11CQ8NB49 1132 aa6.97□□□□□ -1.29
BRCA1-224ENST00000497488 SPPL3Q8TCT6 385 aa6.97□□□□□ -1.29
BRCA1-224ENST00000497488 ERCC4Q92889 916 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-224ENST00000497488 MTFMTQ96DP5 389 aaKnown RBP6.97□□□□□ -1.29
BRCA1-224ENST00000497488 RRP36Q96EU6 259 aaKnown RBP6.97□□□□□ -1.29
BRCA1-224ENST00000497488 GJB4Q9NTQ9 266 aa6.97□□□□□ -1.29
BRCA1-224ENST00000497488 ATP23Q9Y6H3 246 aa6.97□□□□□ -1.29
BRCA1-224ENST00000497488 A0A1W2PPH5 198 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 PGPEP1LA6NFU8 196 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 FGF10O15520 208 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-224ENST00000497488 PPFIA3O75145 1194 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 TMEM127O75204 238 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 DEAF1O75398 565 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-224ENST00000497488 MX2P20592 715 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 FGFR2P21802 821 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 SDHAP31040 664 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 NPTX2P47972 431 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 CLK1P49759 484 aaKnown RBP6.96□□□□□ -1.3
BRCA1-224ENST00000497488 HK3P52790 923 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 CCT2P78371 535 aaKnown RBP6.96□□□□□ -1.3
BRCA1-224ENST00000497488 NKX6-1P78426 367 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-224ENST00000497488 FOXO4P98177 505 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 TRIM25Q14258 630 aaKnown RBP6.96□□□□□ -1.3
BRCA1-224ENST00000497488 MBTPS1Q14703 1052 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 PLCL1Q15111 1095 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 TIGD6Q17RP2 521 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 MFSD4BQ5TF39 518 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 TANGO2Q6ICL3 276 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 ILDR2Q71H61 639 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 C2CD4AQ8NCU7 369 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-224ENST00000497488 ZMIZ2Q8NF64 920 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 STT3BQ8TCJ2 826 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 WHAMMQ8TF30 809 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 TRIM11Q96F44 468 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 TCTN2Q96GX1 697 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 CDHR1Q96JP9 859 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 COX4I2Q96KJ9 171 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 PTCHD1Q96NR3 888 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 PSMG3-AS1Q96PY0 264 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 ASB2Q96Q27 587 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 BRIP1Q9BX63 1249 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 RNF208Q9H0X6 261 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 CCDC68Q9H2F9 335 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 ELAC1Q9H777 363 aaKnown RBP6.96□□□□□ -1.3
BRCA1-224ENST00000497488 MRGBPQ9NV56 204 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 KIF17Q9P2E2 1029 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 ISY1Q9ULR0 285 aaKnown RBP6.96□□□□□ -1.3
BRCA1-224ENST00000497488 NUMBLQ9Y6R0 609 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 CNTNAP4Q9C0A0 1308 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 PRDM2Q13029 1718 aa6.96□□□□□ -1.3
BRCA1-224ENST00000497488 C7orf72A4D263 438 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 B4DLN1 442 aa6.95□□□□□ -1.3
BRCA1-224ENST00000497488 HNRNPDLO14979 420 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms