RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 CA8P35219 290 aa18.82■□□□□ 0.6
TRAPPC3-207ENST00000497251 TCF15Q12870 199 aa18.82■□□□□ 0.6
TRAPPC3-207ENST00000497251 C15orf39Q6ZRI6 1047 aa18.82■□□□□ 0.6
TRAPPC3-207ENST00000497251 PRPF31Q8WWY3 499 aaKnown RBP18.82■□□□□ 0.6
TRAPPC3-207ENST00000497251 ACSF2Q96CM8 615 aaPredicted RBP18.82■□□□□ 0.6
TRAPPC3-207ENST00000497251 RHOBTB2Q9BYZ6 727 aa18.82■□□□□ 0.6
TRAPPC3-207ENST00000497251 ZSWIM4Q9H7M6 989 aa18.82■□□□□ 0.6
TRAPPC3-207ENST00000497251 RSAD1Q9HA92 442 aa18.82■□□□□ 0.6
TRAPPC3-207ENST00000497251 PDRG1Q9NUG6 133 aa18.82■□□□□ 0.6
TRAPPC3-207ENST00000497251 ZFHX2Q9C0A1 2572 aaPredicted RBP18.82■□□□□ 0.6
TRAPPC3-207ENST00000497251 TMEM150BA6NC51 233 aa18.81■□□□□ 0.6
TRAPPC3-207ENST00000497251 C2CD4DB7Z1M9 353 aa18.81■□□□□ 0.6
TRAPPC3-207ENST00000497251 EML1O00423 815 aa18.81■□□□□ 0.6
TRAPPC3-207ENST00000497251 NCLP19338 710 aaKnown RBP18.81■□□□□ 0.6
TRAPPC3-207ENST00000497251 LAMTOR4Q0VGL1 99 aa18.81■□□□□ 0.6
TRAPPC3-207ENST00000497251 OTOP3Q7RTS5 596 aa18.81■□□□□ 0.6
TRAPPC3-207ENST00000497251 GPR65Q8IYL9 337 aa18.81■□□□□ 0.6
TRAPPC3-207ENST00000497251 LPPQ93052 612 aa18.81■□□□□ 0.6
TRAPPC3-207ENST00000497251 APOL5Q9BWW9 433 aa18.81■□□□□ 0.6
TRAPPC3-207ENST00000497251 MRPL17Q9NRX2 175 aaKnown RBP18.81■□□□□ 0.6
TRAPPC3-207ENST00000497251 DBR1Q9UK59 544 aaKnown RBP18.81■□□□□ 0.6
TRAPPC3-207ENST00000497251 INPP5FQ9Y2H2 1132 aa18.81■□□□□ 0.6
TRAPPC3-207ENST00000497251 FAN1Q9Y2M0 1017 aa18.81■□□□□ 0.6
TRAPPC3-207ENST00000497251 INPPL1O15357 1258 aa18.8■□□□□ 0.6
TRAPPC3-207ENST00000497251 SLC37A4O43826 429 aa18.8■□□□□ 0.6
TRAPPC3-207ENST00000497251 HOXA11P31270 313 aaPredicted RBP18.8■□□□□ 0.6
TRAPPC3-207ENST00000497251 YWHABP31946 246 aaKnown RBP18.8■□□□□ 0.6
TRAPPC3-207ENST00000497251 NPEPPSP55786 919 aa18.8■□□□□ 0.6
TRAPPC3-207ENST00000497251 ANKRD1Q15327 319 aa18.8■□□□□ 0.6
TRAPPC3-207ENST00000497251 PTPN14Q15678 1187 aa18.8■□□□□ 0.6
TRAPPC3-207ENST00000497251 RARS2Q5T160 578 aaKnown RBP18.8■□□□□ 0.6
TRAPPC3-207ENST00000497251 AGMOQ6ZNB7 445 aa18.8■□□□□ 0.6
TRAPPC3-207ENST00000497251 GPR149Q86SP6 731 aa18.8■□□□□ 0.6
TRAPPC3-207ENST00000497251 KSR1Q8IVT5 923 aa18.8■□□□□ 0.6
TRAPPC3-207ENST00000497251 HACE1Q8IYU2 909 aa18.8■□□□□ 0.6
TRAPPC3-207ENST00000497251 CMASQ8NFW8 434 aaPredicted RBP18.8■□□□□ 0.6
TRAPPC3-207ENST00000497251 SH2D3AQ9BRG2 576 aa18.8■□□□□ 0.6
TRAPPC3-207ENST00000497251 GALR2O43603 387 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC3-207ENST00000497251 CCNT1O60563 726 aaKnown RBP18.79■□□□□ 0.6
TRAPPC3-207ENST00000497251 NR1I2O75469 434 aa18.79■□□□□ 0.6
TRAPPC3-207ENST00000497251 ERLIN2O94905 339 aa18.79■□□□□ 0.6
TRAPPC3-207ENST00000497251 SRGAP2CP0DJJ0 459 aa18.79■□□□□ 0.6
TRAPPC3-207ENST00000497251 KLRC2P26717 231 aa18.79■□□□□ 0.6
TRAPPC3-207ENST00000497251 SLC11A1P49279 550 aa18.79■□□□□ 0.6
TRAPPC3-207ENST00000497251 CLCN5P51795 746 aa18.79■□□□□ 0.6
TRAPPC3-207ENST00000497251 TFDP1Q14186 410 aa18.79■□□□□ 0.6
TRAPPC3-207ENST00000497251 PLA2G4FQ68DD2 849 aa18.79■□□□□ 0.6
TRAPPC3-207ENST00000497251 FERMT3Q86UX7 667 aa18.79■□□□□ 0.6
TRAPPC3-207ENST00000497251 TMEM173Q86WV6 379 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC3-207ENST00000497251 IFNLR1Q8IU57 520 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC3-207ENST00000497251 HAS1Q92839 578 aa18.79■□□□□ 0.6
TRAPPC3-207ENST00000497251 LXNQ9BS40 222 aa18.79■□□□□ 0.6
TRAPPC3-207ENST00000497251 BRMS1Q9HCU9 246 aa18.79■□□□□ 0.6
TRAPPC3-207ENST00000497251 FAM186AA6NE01 2351 aa18.79■□□□□ 0.6
TRAPPC3-207ENST00000497251 LILRB3O75022 631 aa18.78■□□□□ 0.6
TRAPPC3-207ENST00000497251 LYPLA2O95372 231 aa18.78■□□□□ 0.6
TRAPPC3-207ENST00000497251 EPCAMP16422 314 aa18.78■□□□□ 0.6
TRAPPC3-207ENST00000497251 EMC2Q15006 297 aa18.78■□□□□ 0.6
TRAPPC3-207ENST00000497251 NOTUMQ6P988 496 aa18.78■□□□□ 0.6
TRAPPC3-207ENST00000497251 CCDC149Q6ZUS6 474 aa18.78■□□□□ 0.6
TRAPPC3-207ENST00000497251 RNF149Q8NC42 400 aa18.78■□□□□ 0.6
TRAPPC3-207ENST00000497251 HDAC7Q8WUI4 952 aa18.78■□□□□ 0.6
TRAPPC3-207ENST00000497251 AIFM3Q96NN9 605 aa18.78■□□□□ 0.6
TRAPPC3-207ENST00000497251 KLHL5Q96PQ7 755 aa18.78■□□□□ 0.6
TRAPPC3-207ENST00000497251 MTRQ99707 1265 aa18.78■□□□□ 0.6
TRAPPC3-207ENST00000497251 NFKBIZQ9BYH8 718 aa18.78■□□□□ 0.6
TRAPPC3-207ENST00000497251 DNAJB4Q9UDY4 337 aa18.78■□□□□ 0.6
TRAPPC3-207ENST00000497251 KCNJ14Q9UNX9 436 aa18.78■□□□□ 0.6
TRAPPC3-207ENST00000497251 ZMYM2Q9UBW7 1377 aa18.78■□□□□ 0.6
TRAPPC3-207ENST00000497251 SPDYE4A6NLX3 237 aa18.77■□□□□ 0.6
TRAPPC3-207ENST00000497251 PROB1E7EW31 1015 aa18.77■□□□□ 0.6
TRAPPC3-207ENST00000497251 PFKFB2O60825 505 aa18.77■□□□□ 0.6
TRAPPC3-207ENST00000497251 BRD1O95696 1058 aa18.77■□□□□ 0.6
TRAPPC3-207ENST00000497251 SOD2P04179 222 aa18.77■□□□□ 0.6
TRAPPC3-207ENST00000497251 ADH1AP07327 375 aa18.77■□□□□ 0.6
TRAPPC3-207ENST00000497251 XRCC6P12956 609 aaKnown RBP eCLIP18.77■□□□□ 0.6
TRAPPC3-207ENST00000497251 ITGA4P13612 1032 aa18.77■□□□□ 0.6
TRAPPC3-207ENST00000497251 CLCN4P51793 760 aa18.77■□□□□ 0.6
TRAPPC3-207ENST00000497251 VCPP55072 806 aaKnown RBP18.77■□□□□ 0.6
TRAPPC3-207ENST00000497251 ANAPC15P60006 121 aa18.77■□□□□ 0.6
TRAPPC3-207ENST00000497251 PTENP60484 403 aa18.77■□□□□ 0.6
TRAPPC3-207ENST00000497251 SCRN1Q12765 414 aa18.77■□□□□ 0.6
TRAPPC3-207ENST00000497251 STK3Q13188 491 aa18.77■□□□□ 0.6
TRAPPC3-207ENST00000497251 XKR9Q5GH70 373 aa18.77■□□□□ 0.6
TRAPPC3-207ENST00000497251 PIK3AP1Q6ZUJ8 805 aa18.77■□□□□ 0.6
TRAPPC3-207ENST00000497251 ZNF280BQ86YH2 543 aa18.77■□□□□ 0.6
TRAPPC3-207ENST00000497251 ATOH1Q92858 354 aaPredicted RBP18.77■□□□□ 0.6
TRAPPC3-207ENST00000497251 TMEM143Q96AN5 459 aa18.77■□□□□ 0.6
TRAPPC3-207ENST00000497251 GBP3Q9H0R5 595 aa18.77■□□□□ 0.6
TRAPPC3-207ENST00000497251 ANKEF1Q9NU02 776 aa18.77■□□□□ 0.6
TRAPPC3-207ENST00000497251 LIMD1Q9UGP4 676 aa18.77■□□□□ 0.6
TRAPPC3-207ENST00000497251 KMT2EQ8IZD2 1858 aa18.76■□□□□ 0.59
TRAPPC3-207ENST00000497251 MEIS3P2A8K0S8 358 aa18.76■□□□□ 0.59
TRAPPC3-207ENST00000497251 NRP1O14786 923 aa18.76■□□□□ 0.59
TRAPPC3-207ENST00000497251 EIF5BO60841 1220 aaKnown RBP18.76■□□□□ 0.59
TRAPPC3-207ENST00000497251 DGAT1O75907 488 aa18.76■□□□□ 0.59
TRAPPC3-207ENST00000497251 DDHD2O94830 711 aa18.76■□□□□ 0.59
TRAPPC3-207ENST00000497251 URODP06132 367 aa18.76■□□□□ 0.59
TRAPPC3-207ENST00000497251 CNPP09543 421 aaKnown RBP18.76■□□□□ 0.59
TRAPPC3-207ENST00000497251 SP100P23497 879 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms