RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 G3BP1Q13283 466 aaKnown RBP eCLIP5.89□□□□□ -1.47
CSMD3-208ENST00000497026 BECN1Q14457 450 aa5.89□□□□□ -1.47
CSMD3-208ENST00000497026 TNNI3KQ59H18 835 aa5.89□□□□□ -1.47
CSMD3-208ENST00000497026 MOB2Q70IA6 237 aa5.89□□□□□ -1.47
CSMD3-208ENST00000497026 APOBEC3FQ8IUX4 373 aaKnown RBP5.89□□□□□ -1.47
CSMD3-208ENST00000497026 TMEM151BQ8IW70 566 aa5.89□□□□□ -1.47
CSMD3-208ENST00000497026 SYT8Q8NBV8 401 aa5.89□□□□□ -1.47
CSMD3-208ENST00000497026 WDR66Q8TBY9 1149 aa5.89□□□□□ -1.47
CSMD3-208ENST00000497026 ZNF384Q8TF68 577 aa5.89□□□□□ -1.47
CSMD3-208ENST00000497026 CAPNS2Q96L46 248 aa5.89□□□□□ -1.47
CSMD3-208ENST00000497026 C20orf173Q96LM9 149 aa5.89□□□□□ -1.47
CSMD3-208ENST00000497026 TDRD3Q9H7E2 651 aaKnown RBP5.89□□□□□ -1.47
CSMD3-208ENST00000497026 CAPN10Q9HC96 672 aa5.89□□□□□ -1.47
CSMD3-208ENST00000497026 GPR108Q9NPR9 543 aa5.89□□□□□ -1.47
CSMD3-208ENST00000497026 CLEC1BQ9P126 229 aa5.89□□□□□ -1.47
CSMD3-208ENST00000497026 DBNLQ9UJU6 430 aaKnown RBP5.89□□□□□ -1.47
CSMD3-208ENST00000497026 FZD1Q9UP38 647 aa5.89□□□□□ -1.47
CSMD3-208ENST00000497026 EXOC6BQ9Y2D4 811 aa5.89□□□□□ -1.47
CSMD3-208ENST00000497026 FPGT-TNNI3KV9GXZ4 949 aa5.89□□□□□ -1.47
CSMD3-208ENST00000497026 MAST3O60307 1309 aa5.88□□□□□ -1.47
CSMD3-208ENST00000497026 NPHP3-ACAD11A0A0J9YXS1 232 aa5.88□□□□□ -1.47
CSMD3-208ENST00000497026 GOLGA6L3A6NEY3 463 aa5.88□□□□□ -1.47
CSMD3-208ENST00000497026 B2RBV5 119 aa5.88□□□□□ -1.47
CSMD3-208ENST00000497026 MC3RP41968 323 aa5.88□□□□□ -1.47
CSMD3-208ENST00000497026 MCAMP43121 646 aa5.88□□□□□ -1.47
CSMD3-208ENST00000497026 RBM5P52756 815 aaKnown RBP eCLIP5.88□□□□□ -1.47
CSMD3-208ENST00000497026 RRP1P56182 461 aaKnown RBP5.88□□□□□ -1.47
CSMD3-208ENST00000497026 HUNKP57058 714 aa5.88□□□□□ -1.47
CSMD3-208ENST00000497026 LARP1BQ659C4 914 aaKnown RBP5.88□□□□□ -1.47
CSMD3-208ENST00000497026 APOBEC3HQ6NTF7 200 aaKnown RBP5.88□□□□□ -1.47
CSMD3-208ENST00000497026 HHIPL2Q6UWX4 724 aa5.88□□□□□ -1.47
CSMD3-208ENST00000497026 DBX2Q6ZNG2 339 aa5.88□□□□□ -1.47
CSMD3-208ENST00000497026 RPAP2Q8IXW5 612 aaPredicted RBP5.88□□□□□ -1.47
CSMD3-208ENST00000497026 SMAP1Q8IYB5 467 aaPredicted RBP5.88□□□□□ -1.47
CSMD3-208ENST00000497026 ZDHHC14Q8IZN3 488 aa5.88□□□□□ -1.47
CSMD3-208ENST00000497026 LZTR1Q8N653 840 aa5.88□□□□□ -1.47
CSMD3-208ENST00000497026 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.88□□□□□ -1.47
CSMD3-208ENST00000497026 FEZF2Q8TBJ5 459 aa5.88□□□□□ -1.47
CSMD3-208ENST00000497026 TEKT1Q969V4 418 aa5.88□□□□□ -1.47
CSMD3-208ENST00000497026 EAF2Q96CJ1 260 aaPredicted RBP5.88□□□□□ -1.47
CSMD3-208ENST00000497026 RCC1LQ96I51 464 aaKnown RBP5.88□□□□□ -1.47
CSMD3-208ENST00000497026 TEPSINQ96N21 525 aa5.88□□□□□ -1.47
CSMD3-208ENST00000497026 NEUROD6Q96NK8 337 aa5.88□□□□□ -1.47
CSMD3-208ENST00000497026 KCNC2Q96PR1 638 aa5.88□□□□□ -1.47
CSMD3-208ENST00000497026 APBA2Q99767 749 aa5.88□□□□□ -1.47
CSMD3-208ENST00000497026 DEFB129Q9H1M3 183 aa5.88□□□□□ -1.47
CSMD3-208ENST00000497026 HMG20BQ9P0W2 317 aa5.88□□□□□ -1.47
CSMD3-208ENST00000497026 ZNF70Q9UC06 446 aaPredicted RBP5.88□□□□□ -1.47
CSMD3-208ENST00000497026 DENND2AQ9ULE3 1009 aa5.88□□□□□ -1.47
CSMD3-208ENST00000497026 FOCADQ5VW36 1801 aa5.88□□□□□ -1.47
CSMD3-208ENST00000497026 RFX7Q2KHR2 1363 aa5.87□□□□□ -1.47
CSMD3-208ENST00000497026 GAKO14976 1311 aa5.87□□□□□ -1.47
CSMD3-208ENST00000497026 MYO1BO43795 1136 aa5.87□□□□□ -1.47
CSMD3-208ENST00000497026 ATF2P15336 505 aa5.87□□□□□ -1.47
CSMD3-208ENST00000497026 CACNB3P54284 484 aa5.87□□□□□ -1.47
CSMD3-208ENST00000497026 SCRN1Q12765 414 aa5.87□□□□□ -1.47
CSMD3-208ENST00000497026 GRM1Q13255 1194 aa5.87□□□□□ -1.47
CSMD3-208ENST00000497026 OS9Q13438 667 aaPredicted RBP5.87□□□□□ -1.47
CSMD3-208ENST00000497026 RASA3Q14644 834 aa5.87□□□□□ -1.47
CSMD3-208ENST00000497026 MBLAC2Q68D91 279 aa5.87□□□□□ -1.47
CSMD3-208ENST00000497026 RGMBQ6NW40 437 aa5.87□□□□□ -1.47
CSMD3-208ENST00000497026 C6orf15Q6UXA7 325 aaPredicted RBP5.87□□□□□ -1.47
CSMD3-208ENST00000497026 ADGRG2Q8IZP9 1017 aa5.87□□□□□ -1.47
CSMD3-208ENST00000497026 USP33Q8TEY7 942 aa5.87□□□□□ -1.47
CSMD3-208ENST00000497026 ALG3Q92685 438 aa5.87□□□□□ -1.47
CSMD3-208ENST00000497026 TRIM44Q96DX7 344 aaPredicted RBP5.87□□□□□ -1.47
CSMD3-208ENST00000497026 MRIQ9BWK5 157 aa5.87□□□□□ -1.47
CSMD3-208ENST00000497026 VEZTQ9HBM0 779 aa5.87□□□□□ -1.47
CSMD3-208ENST00000497026 IL1RAPL2Q9NP60 686 aa5.87□□□□□ -1.47
CSMD3-208ENST00000497026 GNL3LQ9NVN8 582 aaKnown RBP5.87□□□□□ -1.47
CSMD3-208ENST00000497026 SIT1Q9Y3P8 196 aa5.87□□□□□ -1.47
CSMD3-208ENST00000497026 PPP2R3BQ9Y5P8 575 aa5.87□□□□□ -1.47
CSMD3-208ENST00000497026 SIPA1L1O43166 1804 aa5.86□□□□□ -1.47
CSMD3-208ENST00000497026 TCP10L2B9ZVM9 353 aa5.86□□□□□ -1.47
CSMD3-208ENST00000497026 UBE2Q2LH0YL09 131 aa5.86□□□□□ -1.47
CSMD3-208ENST00000497026 FOXN1O15353 648 aa5.86□□□□□ -1.47
CSMD3-208ENST00000497026 FUCA1P04066 466 aa5.86□□□□□ -1.47
CSMD3-208ENST00000497026 SSBP05455 408 aaKnown RBP eCLIP5.86□□□□□ -1.47
CSMD3-208ENST00000497026 GLI4P10075 376 aa5.86□□□□□ -1.47
CSMD3-208ENST00000497026 PLS3P13797 630 aa5.86□□□□□ -1.47
CSMD3-208ENST00000497026 PFKLP17858 780 aa5.86□□□□□ -1.47
CSMD3-208ENST00000497026 PAMP19021 973 aa5.86□□□□□ -1.47
CSMD3-208ENST00000497026 ECE1P42892 770 aa5.86□□□□□ -1.47
CSMD3-208ENST00000497026 CORO7P57737 925 aa5.86□□□□□ -1.47
CSMD3-208ENST00000497026 FKBP1BP68106 108 aa5.86□□□□□ -1.47
CSMD3-208ENST00000497026 GRB10Q13322 594 aa5.86□□□□□ -1.47
CSMD3-208ENST00000497026 PRKG1Q13976 671 aa5.86□□□□□ -1.47
CSMD3-208ENST00000497026 CDC42EP5Q6NZY7 148 aa5.86□□□□□ -1.47
CSMD3-208ENST00000497026 RASAL3Q86YV0 1011 aa5.86□□□□□ -1.47
CSMD3-208ENST00000497026 C2orf69Q8N8R5 385 aa5.86□□□□□ -1.47
CSMD3-208ENST00000497026 SPATA5Q8NB90 893 aa5.86□□□□□ -1.47
CSMD3-208ENST00000497026 BVESQ8NE79 360 aa5.86□□□□□ -1.47
CSMD3-208ENST00000497026 TMEM39BQ9GZU3 492 aa5.86□□□□□ -1.47
CSMD3-208ENST00000497026 CCDC8Q9H0W5 538 aaPredicted RBP5.86□□□□□ -1.47
CSMD3-208ENST00000497026 ABCF2Q9UG63 623 aa5.86□□□□□ -1.47
CSMD3-208ENST00000497026 STRIP2Q9ULQ0 834 aa5.86□□□□□ -1.47
CSMD3-208ENST00000497026 EMC9Q9Y3B6 208 aa5.86□□□□□ -1.47
CSMD3-208ENST00000497026 RPAP1Q9BWH6 1393 aaPredicted RBP5.86□□□□□ -1.47
CSMD3-208ENST00000497026 MROH7-TTC4A0A0A0MT08 1334 aa5.85□□□□□ -1.47
CSMD3-208ENST00000497026 DDX60LQ5H9U9 1706 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms