RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 CNTD1Q8N815 330 aa4.48□□□□□ -1.69
EXOSC3-208ENST00000496910 FBXO15Q8NCQ5 510 aaPredicted RBP4.48□□□□□ -1.69
EXOSC3-208ENST00000496910 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.48□□□□□ -1.69
EXOSC3-208ENST00000496910 MZB1Q8WU39 189 aa4.48□□□□□ -1.69
EXOSC3-208ENST00000496910 ATXN2LQ8WWM7 1075 aaKnown RBP4.48□□□□□ -1.69
EXOSC3-208ENST00000496910 WNK4Q96J92 1243 aa4.48□□□□□ -1.69
EXOSC3-208ENST00000496910 RNF38Q9H0F5 515 aa4.48□□□□□ -1.69
EXOSC3-208ENST00000496910 PUS7LQ9H0K6 701 aaKnown RBP4.48□□□□□ -1.69
EXOSC3-208ENST00000496910 DTLQ9NZJ0 730 aa4.48□□□□□ -1.69
EXOSC3-208ENST00000496910 IP6K2Q9UHH9 426 aa4.48□□□□□ -1.69
EXOSC3-208ENST00000496910 CENPFP49454 3210 aa4.48□□□□□ -1.69
EXOSC3-208ENST00000496910 TOP2AP11388 1531 aaKnown RBP4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 ANO9A1A5B4 782 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 PTPDC1A2A3K4 754 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 DYTNA2CJ06 578 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 PRSS47A8MTI9 375 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 PRRT4C9JH25 899 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 ETV2O00321 342 aaPredicted RBP4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 N4BP3O15049 544 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 TGM5O43548 720 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 NBNO60934 754 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 FAHP16930 419 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 GLDCP23378 1020 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 COPB2P35606 906 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 ADCYAP1R1P41586 468 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 STAT5AP42229 794 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 SARSP49591 514 aaKnown RBP4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 NEK4P51957 841 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 ZNF280AP59817 542 aaPredicted RBP4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 DLG4P78352 724 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 ST5P78524 1137 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 GRIN1Q05586 938 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 CACNB2Q08289 660 aaPredicted RBP4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 GRM3Q14832 879 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 RTP5Q14D33 572 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 SLC4A8Q2Y0W8 1093 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 PAN2Q504Q3 1202 aaKnown RBP4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 COBLL1Q53SF7 1204 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 L1TD1Q5T7N2 865 aaKnown RBP4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 SYDE2Q5VT97 1194 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 TEPPQ6URK8 271 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 ETV3LQ6ZN32 361 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 UBE2R2Q712K3 238 aaPredicted RBP4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 B3GNT8Q7Z7M8 397 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 SPATS2Q86XZ4 545 aaKnown RBP4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 ENAHQ8N8S7 591 aaPredicted RBP4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 NGDNQ8NEJ9 315 aaKnown RBP4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 PANK1Q8TE04 598 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 ALG3Q92685 438 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 CDC5LQ99459 802 aaKnown RBP4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 ELAC2Q9BQ52 826 aaKnown RBP4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 BOCQ9BWV1 1114 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 CD320Q9NPF0 282 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 LUC7LQ9NQ29 371 aaKnown RBP4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 PRDM11Q9NQV5 511 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 C9orf78Q9NZ63 289 aaPredicted RBP4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 H2AFY2Q9P0M6 372 aaPredicted RBP4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 BTBD7Q9P203 1132 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 RBPJLQ9UBG7 517 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 DDX20Q9UHI6 824 aaKnown RBP4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 GTF2A1LQ9UNN4 478 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 FAM50BQ9Y247 325 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 IPPQ9Y573 584 aa4.47□□□□□ -1.69
EXOSC3-208ENST00000496910 COL22A1Q8NFW1 1626 aaPredicted RBP4.46□□□□□ -1.69
EXOSC3-208ENST00000496910 PIK3C2AO00443 1686 aa4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 TNRC6CQ9HCJ0 1690 aaKnown RBP4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 SLC12A8A0AV02 714 aa4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 CYSRT1A8MQ03 144 aa4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 BUB1BO60566 1050 aaPredicted RBP4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 MAFKO60675 156 aa4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 RNASEH2AO75792 299 aaKnown RBP4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 MPIG6BO95866 241 aa4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 PLA2G1BP04054 148 aaKnown RBP4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 SDHAP31040 664 aa4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 FLT3P36888 993 aa4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 ID4P47928 161 aa4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 PPM1FP49593 454 aaPredicted RBP4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 TMPRSS15P98073 1019 aa4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 IRF9Q00978 393 aa4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 DLX2Q07687 328 aaPredicted RBP4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 CATSPEREQ5SY80 951 aa4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 OLFML2BQ68BL8 750 aa4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 ESRP1Q6NXG1 681 aaKnown RBP4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 LIPIQ6XZB0 460 aa4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 TRIM48Q8IWZ4 208 aa4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 NLGN4XQ8N0W4 816 aa4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 AHI1Q8N157 1196 aa4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 C2orf69Q8N8R5 385 aa4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 PKNOX2Q96KN3 472 aa4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 HERPUD2Q9BSE4 406 aa4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 PLCB1Q9NQ66 1216 aa4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 OXSMQ9NWU1 459 aa4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 DBR1Q9UK59 544 aaKnown RBP4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 ZBTB21Q9ULJ3 1066 aa4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 PHTF1Q9UMS5 762 aa4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 SPEF1Q9Y4P9 236 aa4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 ATP23Q9Y6H3 246 aa4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 COL24A1Q17RW2 1714 aa4.46□□□□□ -1.7
EXOSC3-208ENST00000496910 NEXMIFQ5QGS0 1516 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms