RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 ATP11BQ9Y2G3 1177 aa20.07■□□□□ 0.8
RGP1-202ENST00000496906 CSDE1O75534 798 aaKnown RBP20.06■□□□□ 0.8
RGP1-202ENST00000496906 ZNF165P49910 485 aa20.06■□□□□ 0.8
RGP1-202ENST00000496906 PMS1P54277 932 aaKnown RBP20.06■□□□□ 0.8
RGP1-202ENST00000496906 AMHR2Q16671 573 aa20.06■□□□□ 0.8
RGP1-202ENST00000496906 FAM187BQ17R55 369 aa20.06■□□□□ 0.8
RGP1-202ENST00000496906 ZCWPW2Q504Y3 356 aa20.06■□□□□ 0.8
RGP1-202ENST00000496906 ZNF618Q5T7W0 954 aa20.06■□□□□ 0.8
RGP1-202ENST00000496906 TRAF7Q6Q0C0 670 aa20.06■□□□□ 0.8
RGP1-202ENST00000496906 PPP4R3CPQ6ZMV5 832 aa20.06■□□□□ 0.8
RGP1-202ENST00000496906 CCDC155Q8N6L0 562 aa20.06■□□□□ 0.8
RGP1-202ENST00000496906 BPIFA3Q9BQP9 254 aa20.06■□□□□ 0.8
RGP1-202ENST00000496906 PRMT7Q9NVM4 692 aaPredicted RBP20.06■□□□□ 0.8
RGP1-202ENST00000496906 RWDD2AQ9UIY3 292 aa20.06■□□□□ 0.8
RGP1-202ENST00000496906 EXOC7Q9UPT5 735 aa20.06■□□□□ 0.8
RGP1-202ENST00000496906 TRIM49BA6NDI0 452 aa20.05■□□□□ 0.8
RGP1-202ENST00000496906 ACKR2O00590 384 aa20.05■□□□□ 0.8
RGP1-202ENST00000496906 TGFB1I1O43294 461 aa20.05■□□□□ 0.8
RGP1-202ENST00000496906 PIGRP01833 764 aa20.05■□□□□ 0.8
RGP1-202ENST00000496906 STX17P56962 302 aa20.05■□□□□ 0.8
RGP1-202ENST00000496906 BFSP2Q13515 415 aa20.05■□□□□ 0.8
RGP1-202ENST00000496906 SYCP3Q8IZU3 236 aa20.05■□□□□ 0.8
RGP1-202ENST00000496906 PRIMPOLQ96LW4 560 aa20.05■□□□□ 0.8
RGP1-202ENST00000496906 GBP3Q9H0R5 595 aa20.05■□□□□ 0.8
RGP1-202ENST00000496906 TYW1Q9NV66 732 aaKnown RBP20.05■□□□□ 0.8
RGP1-202ENST00000496906 TRAF3IP3Q9Y228 551 aa20.05■□□□□ 0.8
RGP1-202ENST00000496906 PITPNM1O00562 1244 aa20.04■□□□□ 0.8
RGP1-202ENST00000496906 PDXKO00764 312 aa20.04■□□□□ 0.8
RGP1-202ENST00000496906 PCBP1Q15365 356 aaKnown RBP eCLIP20.04■□□□□ 0.8
RGP1-202ENST00000496906 TTI2Q6NXR4 508 aa20.04■□□□□ 0.8
RGP1-202ENST00000496906 FOXR2Q6PJQ5 311 aa20.04■□□□□ 0.8
RGP1-202ENST00000496906 GAS2L3Q86XJ1 694 aa20.04■□□□□ 0.8
RGP1-202ENST00000496906 FAM200AQ8TCP9 573 aa20.04■□□□□ 0.8
RGP1-202ENST00000496906 NOC4LQ9BVI4 516 aaKnown RBP20.04■□□□□ 0.8
RGP1-202ENST00000496906 MRPL4Q9BYD3 311 aaKnown RBP20.04■□□□□ 0.8
RGP1-202ENST00000496906 USP20Q9Y2K6 914 aa20.04■□□□□ 0.8
RGP1-202ENST00000496906 MKI67P46013 3256 aaKnown RBP20.04■□□□□ 0.8
RGP1-202ENST00000496906 BICDL2A1A5D9 508 aa20.04■□□□□ 0.8
RGP1-202ENST00000496906 TTLL13PA6NNM8 815 aa20.04■□□□□ 0.8
RGP1-202ENST00000496906 HNRNPDLO14979 420 aaKnown RBP20.04■□□□□ 0.8
RGP1-202ENST00000496906 SELPP16109 830 aa20.04■□□□□ 0.8
RGP1-202ENST00000496906 SFPQP23246 707 aaKnown RBP eCLIP20.04■□□□□ 0.8
RGP1-202ENST00000496906 LRRC63Q05C16 580 aa20.04■□□□□ 0.8
RGP1-202ENST00000496906 ANKRD40Q6AI12 368 aa20.04■□□□□ 0.8
RGP1-202ENST00000496906 SLC39A4Q6P5W5 647 aa20.04■□□□□ 0.8
RGP1-202ENST00000496906 BICD1Q96G01 975 aa20.04■□□□□ 0.8
RGP1-202ENST00000496906 TARS2Q9BW92 718 aaKnown RBP20.04■□□□□ 0.8
RGP1-202ENST00000496906 CBX8Q9HC52 389 aa20.04■□□□□ 0.8
RGP1-202ENST00000496906 TBX21Q9UL17 535 aa20.04■□□□□ 0.8
RGP1-202ENST00000496906 CNTNAP2Q9UHC6 1331 aa20.04■□□□□ 0.8
RGP1-202ENST00000496906 TISP43B9A030 160 aa20.03■□□□□ 0.8
RGP1-202ENST00000496906 B4GALT5O43286 388 aa20.03■□□□□ 0.8
RGP1-202ENST00000496906 TSPAN1O60635 241 aa20.03■□□□□ 0.8
RGP1-202ENST00000496906 CLTBP09497 229 aa20.03■□□□□ 0.8
RGP1-202ENST00000496906 FGFR4P22455 802 aa20.03■□□□□ 0.8
RGP1-202ENST00000496906 PRPF4BQ13523 1007 aaKnown RBP20.03■□□□□ 0.8
RGP1-202ENST00000496906 IQCB1Q15051 598 aa20.03■□□□□ 0.8
RGP1-202ENST00000496906 FBXO47Q5MNV8 452 aa20.03■□□□□ 0.8
RGP1-202ENST00000496906 ZPBP2Q6X784 338 aa20.03■□□□□ 0.8
RGP1-202ENST00000496906 LRRC8DQ7L1W4 858 aa20.03■□□□□ 0.8
RGP1-202ENST00000496906 HS2ST1Q7LGA3 356 aa20.03■□□□□ 0.8
RGP1-202ENST00000496906 FAM228AQ86W67 206 aa20.03■□□□□ 0.8
RGP1-202ENST00000496906 ENOX1Q8TC92 643 aaKnown RBP20.03■□□□□ 0.8
RGP1-202ENST00000496906 HIPK3Q9H422 1215 aa20.03■□□□□ 0.8
RGP1-202ENST00000496906 AGPAT3Q9NRZ7 376 aa20.03■□□□□ 0.8
RGP1-202ENST00000496906 NOC2LQ9Y3T9 749 aaKnown RBP20.03■□□□□ 0.8
RGP1-202ENST00000496906 ANKRD63C9JTQ0 380 aa20.02■□□□□ 0.8
RGP1-202ENST00000496906 CALUO43852 315 aaPredicted RBP20.02■□□□□ 0.8
RGP1-202ENST00000496906 ERLIN2O94905 339 aa20.02■□□□□ 0.8
RGP1-202ENST00000496906 LIG4P49917 911 aa20.02■□□□□ 0.8
RGP1-202ENST00000496906 SNRPFP62306 86 aaKnown RBP20.02■□□□□ 0.8
RGP1-202ENST00000496906 MYL5Q02045 173 aa20.02■□□□□ 0.8
RGP1-202ENST00000496906 MBTPS1Q14703 1052 aa20.02■□□□□ 0.8
RGP1-202ENST00000496906 EDRF1Q3B7T1 1238 aa20.02■□□□□ 0.8
RGP1-202ENST00000496906 CATSPER4Q7RTX7 472 aa20.02■□□□□ 0.8
RGP1-202ENST00000496906 DHX40Q8IX18 779 aaKnown RBP20.02■□□□□ 0.8
RGP1-202ENST00000496906 AOPEPQ8N6M6 819 aa20.02■□□□□ 0.8
RGP1-202ENST00000496906 GOLGA5Q8TBA6 731 aa20.02■□□□□ 0.8
RGP1-202ENST00000496906 ACO2Q99798 780 aaKnown RBP20.02■□□□□ 0.8
RGP1-202ENST00000496906 TSG101Q99816 390 aa20.02■□□□□ 0.8
RGP1-202ENST00000496906 DUSP9Q99956 384 aaKnown RBP20.02■□□□□ 0.8
RGP1-202ENST00000496906 OSBPL7Q9BZF2 842 aa20.02■□□□□ 0.8
RGP1-202ENST00000496906 CGNQ9P2M7 1197 aaKnown RBP20.02■□□□□ 0.8
RGP1-202ENST00000496906 SQORQ9Y6N5 450 aa20.02■□□□□ 0.8
RGP1-202ENST00000496906 UMODL1Q5DID0 1318 aa20.01■□□□□ 0.79
RGP1-202ENST00000496906 RPS6KA5O75582 802 aa20.01■□□□□ 0.79
RGP1-202ENST00000496906 ARF4P18085 180 aaPredicted RBP20.01■□□□□ 0.79
RGP1-202ENST00000496906 LPIN1Q14693 890 aa20.01■□□□□ 0.79
RGP1-202ENST00000496906 NCAPHQ15003 741 aa20.01■□□□□ 0.79
RGP1-202ENST00000496906 NFIL3Q16649 462 aa20.01■□□□□ 0.79
RGP1-202ENST00000496906 TSHZ1Q6ZSZ6 1077 aa20.01■□□□□ 0.79
RGP1-202ENST00000496906 TMEM39AQ9NV64 488 aa20.01■□□□□ 0.79
RGP1-202ENST00000496906 STYXL1Q9Y6J8 313 aa20.01■□□□□ 0.79
RGP1-202ENST00000496906 IKBKBO14920 756 aa20■□□□□ 0.79
RGP1-202ENST00000496906 GHRP10912 638 aa20■□□□□ 0.79
RGP1-202ENST00000496906 ADSSP30520 456 aa20■□□□□ 0.79
RGP1-202ENST00000496906 ATF7IP2Q5U623 682 aa20■□□□□ 0.79
RGP1-202ENST00000496906 C12orf56Q8IXR9 622 aa20■□□□□ 0.79
RGP1-202ENST00000496906 ZC3H3Q8IXZ2 948 aaKnown RBP20■□□□□ 0.79
RGP1-202ENST00000496906 USP38Q8NB14 1042 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms