RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 C11orf84Q9BUA3 381 aaPredicted RBP17.84■□□□□ 0.45
DNMT3A-215ENST00000496570 CCSER1Q9C0I3 900 aa17.84■□□□□ 0.45
DNMT3A-215ENST00000496570 ALG13Q9NP73 1137 aaKnown RBP17.84■□□□□ 0.45
DNMT3A-215ENST00000496570 USP20Q9Y2K6 914 aa17.84■□□□□ 0.45
DNMT3A-215ENST00000496570 A0A1B0GUA9 196 aa17.83■□□□□ 0.44
DNMT3A-215ENST00000496570 OFD1O75665 1012 aa17.83■□□□□ 0.44
DNMT3A-215ENST00000496570 PLA2G4BP0C869 781 aa17.83■□□□□ 0.44
DNMT3A-215ENST00000496570 ZSCAN22P10073 491 aaPredicted RBP17.83■□□□□ 0.44
DNMT3A-215ENST00000496570 SKIP12755 728 aa17.83■□□□□ 0.44
DNMT3A-215ENST00000496570 PLCG1P19174 1290 aa17.83■□□□□ 0.44
DNMT3A-215ENST00000496570 NCLP19338 710 aaKnown RBP17.83■□□□□ 0.44
DNMT3A-215ENST00000496570 UBA7P41226 1012 aa17.83■□□□□ 0.44
DNMT3A-215ENST00000496570 AFF1P51825 1210 aaKnown RBP17.83■□□□□ 0.44
DNMT3A-215ENST00000496570 FOXD4L5Q5VV16 416 aaPredicted RBP17.83■□□□□ 0.44
DNMT3A-215ENST00000496570 CDR2LQ86X02 465 aaPredicted RBP17.83■□□□□ 0.44
DNMT3A-215ENST00000496570 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.83■□□□□ 0.44
DNMT3A-215ENST00000496570 SLC17A8Q8NDX2 589 aa17.83■□□□□ 0.44
DNMT3A-215ENST00000496570 SPPL3Q8TCT6 385 aa17.83■□□□□ 0.44
DNMT3A-215ENST00000496570 FOXD4L4Q8WXT5 416 aaPredicted RBP17.83■□□□□ 0.44
DNMT3A-215ENST00000496570 CCDC51Q96ER9 411 aa17.83■□□□□ 0.44
DNMT3A-215ENST00000496570 RNF39Q9H2S5 420 aa17.83■□□□□ 0.44
DNMT3A-215ENST00000496570 IPPQ9Y573 584 aa17.83■□□□□ 0.44
DNMT3A-215ENST00000496570 VCANP13611 3396 aa17.82■□□□□ 0.44
DNMT3A-215ENST00000496570 CNTNAP2Q9UHC6 1331 aa17.82■□□□□ 0.44
DNMT3A-215ENST00000496570 NPHP3-ACAD11A0A0J9YXS1 232 aa17.82■□□□□ 0.44
DNMT3A-215ENST00000496570 B4GALT3O60512 393 aa17.82■□□□□ 0.44
DNMT3A-215ENST00000496570 F13A1P00488 732 aa17.82■□□□□ 0.44
DNMT3A-215ENST00000496570 HSP90AA1P07900 732 aaKnown RBP17.82■□□□□ 0.44
DNMT3A-215ENST00000496570 NPTX2P47972 431 aa17.82■□□□□ 0.44
DNMT3A-215ENST00000496570 NAALADL2Q58DX5 795 aa17.82■□□□□ 0.44
DNMT3A-215ENST00000496570 NOTUMQ6P988 496 aa17.82■□□□□ 0.44
DNMT3A-215ENST00000496570 TAS1R3Q7RTX0 852 aa17.82■□□□□ 0.44
DNMT3A-215ENST00000496570 LRRC43Q8N309 656 aa17.82■□□□□ 0.44
DNMT3A-215ENST00000496570 LINC00301Q8NCQ3 95 aa17.82■□□□□ 0.44
DNMT3A-215ENST00000496570 SYMPKQ92797 1274 aaKnown RBP17.82■□□□□ 0.44
DNMT3A-215ENST00000496570 PRIMPOLQ96LW4 560 aa17.82■□□□□ 0.44
DNMT3A-215ENST00000496570 C2orf40Q9H1Z8 148 aa17.82■□□□□ 0.44
DNMT3A-215ENST00000496570 PRMT7Q9NVM4 692 aaPredicted RBP17.82■□□□□ 0.44
DNMT3A-215ENST00000496570 SFI1A8K8P3 1242 aa17.81■□□□□ 0.44
DNMT3A-215ENST00000496570 PRKCBP05771 671 aa17.81■□□□□ 0.44
DNMT3A-215ENST00000496570 PBX3P40426 434 aa17.81■□□□□ 0.44
DNMT3A-215ENST00000496570 PEX3P56589 373 aa17.81■□□□□ 0.44
DNMT3A-215ENST00000496570 PPP2R5AQ15172 486 aa17.81■□□□□ 0.44
DNMT3A-215ENST00000496570 ZBTB8OSQ8IWT0 167 aa17.81■□□□□ 0.44
DNMT3A-215ENST00000496570 ABI1Q8IZP0 508 aa17.81■□□□□ 0.44
DNMT3A-215ENST00000496570 DEPTORQ8TB45 409 aa17.81■□□□□ 0.44
DNMT3A-215ENST00000496570 RAD54LQ92698 747 aa17.81■□□□□ 0.44
DNMT3A-215ENST00000496570 CALML4Q96GE6 196 aa17.81■□□□□ 0.44
DNMT3A-215ENST00000496570 CDK5RAP3Q96JB5 506 aa17.81■□□□□ 0.44
DNMT3A-215ENST00000496570 LMAN2LQ9H0V9 348 aa17.81■□□□□ 0.44
DNMT3A-215ENST00000496570 PDZD7Q9H5P4 517 aa17.81■□□□□ 0.44
DNMT3A-215ENST00000496570 TBC1D13Q9NVG8 400 aa17.81■□□□□ 0.44
DNMT3A-215ENST00000496570 ARHGAP28Q9P2N2 729 aa17.81■□□□□ 0.44
DNMT3A-215ENST00000496570 TFIP11Q9UBB9 837 aaKnown RBP17.81■□□□□ 0.44
DNMT3A-215ENST00000496570 ZDHHC9Q9Y397 364 aa17.81■□□□□ 0.44
DNMT3A-215ENST00000496570 HES2Q9Y543 173 aa17.81■□□□□ 0.44
DNMT3A-215ENST00000496570 A0A087X0B3 334 aa17.8■□□□□ 0.44
DNMT3A-215ENST00000496570 ACKR2O00590 384 aa17.8■□□□□ 0.44
DNMT3A-215ENST00000496570 INPPL1O15357 1258 aa17.8■□□□□ 0.44
DNMT3A-215ENST00000496570 SSBP05455 408 aaKnown RBP eCLIP17.8■□□□□ 0.44
DNMT3A-215ENST00000496570 PDIA4P13667 645 aaKnown RBP17.8■□□□□ 0.44
DNMT3A-215ENST00000496570 LAG3P18627 525 aa17.8■□□□□ 0.44
DNMT3A-215ENST00000496570 CACNB1Q02641 598 aaPredicted RBP17.8■□□□□ 0.44
DNMT3A-215ENST00000496570 RAD51AP2Q09MP3 1159 aa17.8■□□□□ 0.44
DNMT3A-215ENST00000496570 MCM6Q14566 821 aa17.8■□□□□ 0.44
DNMT3A-215ENST00000496570 PTPROQ16827 1216 aa17.8■□□□□ 0.44
DNMT3A-215ENST00000496570 NOMO2Q5JPE7 1267 aa17.8■□□□□ 0.44
DNMT3A-215ENST00000496570 NT5DC1Q5TFE4 455 aa17.8■□□□□ 0.44
DNMT3A-215ENST00000496570 SLC27A1Q6PCB7 646 aa17.8■□□□□ 0.44
DNMT3A-215ENST00000496570 KCNT2Q6UVM3 1135 aa17.8■□□□□ 0.44
DNMT3A-215ENST00000496570 PGBD4Q96DM1 585 aa17.8■□□□□ 0.44
DNMT3A-215ENST00000496570 IFT74Q96LB3 600 aa17.8■□□□□ 0.44
DNMT3A-215ENST00000496570 DRC1Q96MC2 740 aa17.8■□□□□ 0.44
DNMT3A-215ENST00000496570 TIPINQ9BVW5 301 aa17.8■□□□□ 0.44
DNMT3A-215ENST00000496570 NXF3Q9H4D5 531 aaKnown RBP17.8■□□□□ 0.44
DNMT3A-215ENST00000496570 RSAD1Q9HA92 442 aa17.8■□□□□ 0.44
DNMT3A-215ENST00000496570 KCND2Q9NZV8 630 aa17.8■□□□□ 0.44
DNMT3A-215ENST00000496570 MYO7AQ13402 2215 aa17.8■□□□□ 0.44
DNMT3A-215ENST00000496570 FGF18O76093 207 aa17.79■□□□□ 0.44
DNMT3A-215ENST00000496570 NPTXRO95502 500 aa17.79■□□□□ 0.44
DNMT3A-215ENST00000496570 IRS1P35568 1242 aa17.79■□□□□ 0.44
DNMT3A-215ENST00000496570 EFNA5P52803 228 aa17.79■□□□□ 0.44
DNMT3A-215ENST00000496570 COL19A1Q14993 1142 aa17.79■□□□□ 0.44
DNMT3A-215ENST00000496570 MAPK6Q16659 721 aa17.79■□□□□ 0.44
DNMT3A-215ENST00000496570 SPOUT1Q5T280 376 aaKnown RBP17.79■□□□□ 0.44
DNMT3A-215ENST00000496570 EEF1DP3Q658K8 133 aa17.79■□□□□ 0.44
DNMT3A-215ENST00000496570 GLB1LQ6UWU2 654 aa17.79■□□□□ 0.44
DNMT3A-215ENST00000496570 ZNF280BQ86YH2 543 aa17.79■□□□□ 0.44
DNMT3A-215ENST00000496570 KRI1Q8N9T8 703 aaKnown RBP17.79■□□□□ 0.44
DNMT3A-215ENST00000496570 CNNM3Q8NE01 707 aa17.79■□□□□ 0.44
DNMT3A-215ENST00000496570 GSTCDQ8NEC7 633 aa17.79■□□□□ 0.44
DNMT3A-215ENST00000496570 POF1BQ8WVV4 589 aa17.79■□□□□ 0.44
DNMT3A-215ENST00000496570 RSPH1Q8WYR4 309 aa17.79■□□□□ 0.44
DNMT3A-215ENST00000496570 NTPCRQ9BSD7 190 aaKnown RBP17.79■□□□□ 0.44
DNMT3A-215ENST00000496570 MRPL9Q9BYD2 267 aaKnown RBP17.79■□□□□ 0.44
DNMT3A-215ENST00000496570 NRDE2Q9H7Z3 1164 aa17.79■□□□□ 0.44
DNMT3A-215ENST00000496570 INPP5FQ9Y2H2 1132 aa17.79■□□□□ 0.44
DNMT3A-215ENST00000496570 PCDHB12Q9Y5F1 795 aa17.79■□□□□ 0.44
DNMT3A-215ENST00000496570 DDHD2O94830 711 aa17.78■□□□□ 0.44
DNMT3A-215ENST00000496570 BRD1O95696 1058 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms