RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 AGO3Q9H9G7 860 aaKnown RBP23.91■■□□□ 1.42
C9orf3-222ENST00000496567 PADI3Q9ULW8 664 aa23.91■■□□□ 1.42
C9orf3-222ENST00000496567 ST3GAL5Q9UNP4 418 aa23.91■■□□□ 1.42
C9orf3-222ENST00000496567 EXOC7Q9UPT5 735 aa23.91■■□□□ 1.42
C9orf3-222ENST00000496567 CXCL10P02778 98 aa23.91■■□□□ 1.42
C9orf3-222ENST00000496567 CD52P31358 61 aa23.91■■□□□ 1.42
C9orf3-222ENST00000496567 NFX1Q12986 1120 aaKnown RBP23.91■■□□□ 1.42
C9orf3-222ENST00000496567 ISM2Q6H9L7 571 aa23.91■■□□□ 1.42
C9orf3-222ENST00000496567 TAS1R3Q7RTX0 852 aa23.91■■□□□ 1.42
C9orf3-222ENST00000496567 MAP4K3Q8IVH8 894 aa23.91■■□□□ 1.42
C9orf3-222ENST00000496567 GLIS3Q8NEA6 775 aa23.91■■□□□ 1.42
C9orf3-222ENST00000496567 ZNF507Q8TCN5 953 aa23.91■■□□□ 1.42
C9orf3-222ENST00000496567 IFIH1Q9BYX4 1025 aaKnown RBP23.91■■□□□ 1.42
C9orf3-222ENST00000496567 TMEM206Q9H813 350 aa23.91■■□□□ 1.42
C9orf3-222ENST00000496567 GDAQ9Y2T3 454 aa23.91■■□□□ 1.42
C9orf3-222ENST00000496567 PRPF6O94906 941 aaKnown RBP23.9■■□□□ 1.42
C9orf3-222ENST00000496567 FGFR4P22455 802 aa23.9■■□□□ 1.42
C9orf3-222ENST00000496567 AXLP30530 894 aa23.9■■□□□ 1.42
C9orf3-222ENST00000496567 PRPF4BQ13523 1007 aaKnown RBP23.9■■□□□ 1.42
C9orf3-222ENST00000496567 GPNMBQ14956 572 aa23.9■■□□□ 1.42
C9orf3-222ENST00000496567 RPUSD2Q8IZ73 545 aaKnown RBP23.9■■□□□ 1.42
C9orf3-222ENST00000496567 MYOCDQ8IZQ8 938 aa23.9■■□□□ 1.42
C9orf3-222ENST00000496567 SCFD1Q8WVM8 642 aa23.9■■□□□ 1.42
C9orf3-222ENST00000496567 MRPL4Q9BYD3 311 aaKnown RBP23.9■■□□□ 1.42
C9orf3-222ENST00000496567 OSBPL7Q9BZF2 842 aa23.9■■□□□ 1.42
C9orf3-222ENST00000496567 ERVK-5Q9HDB9 667 aa23.9■■□□□ 1.42
C9orf3-222ENST00000496567 TSPAN1O60635 241 aa23.89■■□□□ 1.41
C9orf3-222ENST00000496567 SYN1P17600 705 aa23.89■■□□□ 1.41
C9orf3-222ENST00000496567 PPP1R2P41236 205 aa23.89■■□□□ 1.41
C9orf3-222ENST00000496567 AMHR2Q16671 573 aa23.89■■□□□ 1.41
C9orf3-222ENST00000496567 BMT2Q1RMZ1 405 aa23.89■■□□□ 1.41
C9orf3-222ENST00000496567 COBLL1Q53SF7 1204 aa23.89■■□□□ 1.41
C9orf3-222ENST00000496567 SASS6Q6UVJ0 657 aa23.89■■□□□ 1.41
C9orf3-222ENST00000496567 SEPT8Q92599 483 aa23.89■■□□□ 1.41
C9orf3-222ENST00000496567 APBB2Q92870 758 aa23.89■■□□□ 1.41
C9orf3-222ENST00000496567 BICD1Q96G01 975 aa23.89■■□□□ 1.41
C9orf3-222ENST00000496567 ZMYND8Q9ULU4 1186 aaPredicted RBP23.89■■□□□ 1.41
C9orf3-222ENST00000496567 CNTNAP2Q9UHC6 1331 aa23.88■■□□□ 1.41
C9orf3-222ENST00000496567 PFKMP08237 780 aa23.88■■□□□ 1.41
C9orf3-222ENST00000496567 CSF2RAP15509 400 aa23.88■■□□□ 1.41
C9orf3-222ENST00000496567 PPIGQ13427 754 aaKnown RBP eCLIP23.88■■□□□ 1.412e-14■□□□□ 11.1
C9orf3-222ENST00000496567 STIM1Q13586 685 aa23.88■■□□□ 1.41
C9orf3-222ENST00000496567 TMEM132AQ24JP5 1023 aa23.88■■□□□ 1.41
C9orf3-222ENST00000496567 PLEKHG4Q58EX7 1191 aa23.88■■□□□ 1.41
C9orf3-222ENST00000496567 DEFB128Q7Z7B8 93 aa23.88■■□□□ 1.41
C9orf3-222ENST00000496567 SYCP3Q8IZU3 236 aa23.88■■□□□ 1.41
C9orf3-222ENST00000496567 GUF1Q8N442 669 aaKnown RBP23.88■■□□□ 1.41
C9orf3-222ENST00000496567 BADQ92934 168 aa23.88■■□□□ 1.41
C9orf3-222ENST00000496567 LBHD1Q9BQE6 289 aaPredicted RBP23.88■■□□□ 1.41
C9orf3-222ENST00000496567 CHST12Q9NRB3 414 aa23.88■■□□□ 1.41
C9orf3-222ENST00000496567 AGPAT5Q9NUQ2 364 aa23.88■■□□□ 1.41
C9orf3-222ENST00000496567 CAPN15O75808 1086 aa23.87■■□□□ 1.41
C9orf3-222ENST00000496567 ZPBP2Q6X784 338 aa23.87■■□□□ 1.41
C9orf3-222ENST00000496567 SMYD4Q8IYR2 804 aaPredicted RBP23.87■■□□□ 1.41
C9orf3-222ENST00000496567 FTHL17Q9BXU8 183 aa23.87■■□□□ 1.41
C9orf3-222ENST00000496567 PIN4Q9Y237 131 aaKnown RBP23.87■■□□□ 1.41
C9orf3-222ENST00000496567 HNRNPDLO14979 420 aaKnown RBP23.86■■□□□ 1.41
C9orf3-222ENST00000496567 B4GALT5O43286 388 aa23.86■■□□□ 1.41
C9orf3-222ENST00000496567 PIGRP01833 764 aa23.86■■□□□ 1.41
C9orf3-222ENST00000496567 ZSCAN20P17040 1043 aaPredicted RBP23.86■■□□□ 1.41
C9orf3-222ENST00000496567 ARF4P18085 180 aaPredicted RBP23.86■■□□□ 1.41
C9orf3-222ENST00000496567 BMP6P22004 513 aa23.86■■□□□ 1.41
C9orf3-222ENST00000496567 NLRP12P59046 1061 aa23.86■■□□□ 1.41
C9orf3-222ENST00000496567 FPGSQ05932 587 aa23.86■■□□□ 1.41
C9orf3-222ENST00000496567 KCNA1Q09470 495 aa23.86■■□□□ 1.41
C9orf3-222ENST00000496567 NOTUMQ6P988 496 aa23.86■■□□□ 1.41
C9orf3-222ENST00000496567 DBF4BQ8NFT6 615 aa23.86■■□□□ 1.41
C9orf3-222ENST00000496567 ACO2Q99798 780 aaKnown RBP23.86■■□□□ 1.41
C9orf3-222ENST00000496567 MAPK8IP1Q9UQF2 711 aa23.86■■□□□ 1.41
C9orf3-222ENST00000496567 SCN5AQ14524 2016 aa23.86■■□□□ 1.41
C9orf3-222ENST00000496567 PRCPP42785 496 aa23.86■■□□□ 1.41
C9orf3-222ENST00000496567 LIG4P49917 911 aa23.86■■□□□ 1.41
C9orf3-222ENST00000496567 KNOP1Q1ED39 458 aaKnown RBP23.86■■□□□ 1.41
C9orf3-222ENST00000496567 ATF7IP2Q5U623 682 aa23.86■■□□□ 1.41
C9orf3-222ENST00000496567 NELFCDQ8IXH7 590 aa23.86■■□□□ 1.41
C9orf3-222ENST00000496567 MLKLQ8NB16 471 aa23.86■■□□□ 1.41
C9orf3-222ENST00000496567 CCDC51Q96ER9 411 aa23.86■■□□□ 1.41
C9orf3-222ENST00000496567 TARS2Q9BW92 718 aaKnown RBP23.86■■□□□ 1.41
C9orf3-222ENST00000496567 IL23AQ9NPF7 189 aa23.86■■□□□ 1.41
C9orf3-222ENST00000496567 LTBP2Q14767 1821 aa23.85■■□□□ 1.41
C9orf3-222ENST00000496567 A0A1B0GUA9 196 aa23.85■■□□□ 1.41
C9orf3-222ENST00000496567 N4BP3O15049 544 aa23.85■■□□□ 1.41
C9orf3-222ENST00000496567 EDN1P05305 212 aa23.85■■□□□ 1.41
C9orf3-222ENST00000496567 HOXA11P31270 313 aaPredicted RBP23.85■■□□□ 1.41
C9orf3-222ENST00000496567 CNKSR3Q6P9H4 555 aa23.85■■□□□ 1.41
C9orf3-222ENST00000496567 ADSSL1Q8N142 457 aa23.85■■□□□ 1.41
C9orf3-222ENST00000496567 CPB2Q96IY4 423 aa23.85■■□□□ 1.41
C9orf3-222ENST00000496567 GBP3Q9H0R5 595 aa23.85■■□□□ 1.41
C9orf3-222ENST00000496567 TNFSF13BQ9Y275 285 aa23.85■■□□□ 1.41
C9orf3-222ENST00000496567 TOM1L1O75674 476 aa23.84■■□□□ 1.41
C9orf3-222ENST00000496567 HOXD13P35453 343 aa23.84■■□□□ 1.41
C9orf3-222ENST00000496567 ZSCAN23Q3MJ62 389 aa23.84■■□□□ 1.41
C9orf3-222ENST00000496567 HS2ST1Q7LGA3 356 aa23.84■■□□□ 1.41
C9orf3-222ENST00000496567 APBB1IPQ7Z5R6 666 aaPredicted RBP23.84■■□□□ 1.41
C9orf3-222ENST00000496567 ADPGKQ9BRR6 497 aa23.84■■□□□ 1.41
C9orf3-222ENST00000496567 TMX1Q9H3N1 280 aa23.84■■□□□ 1.41
C9orf3-222ENST00000496567 DACH1Q9UI36 760 aa23.84■■□□□ 1.41
C9orf3-222ENST00000496567 TTLL13PA6NNM8 815 aa23.83■■□□□ 1.41
C9orf3-222ENST00000496567 PSMA7O14818 248 aa23.83■■□□□ 1.41
C9orf3-222ENST00000496567 SNRPFP62306 86 aaKnown RBP23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms