RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 A0A1W2PR48 441 aa7.88□□□□□ -1.15
SF3B1-212ENST00000496458 GOLGA8AA7E2F4 631 aa7.88□□□□□ -1.15
SF3B1-212ENST00000496458 DNAJC6O75061 913 aa7.88□□□□□ -1.15
SF3B1-212ENST00000496458 SCAND1P57086 179 aa7.88□□□□□ -1.15
SF3B1-212ENST00000496458 SPIDRQ14159 915 aa7.88□□□□□ -1.15
SF3B1-212ENST00000496458 ELAVL1Q15717 326 aaKnown RBP7.88□□□□□ -1.15
SF3B1-212ENST00000496458 NRN1LQ496H8 165 aa7.88□□□□□ -1.15
SF3B1-212ENST00000496458 USP39Q53GS9 565 aaKnown RBP7.88□□□□□ -1.15
SF3B1-212ENST00000496458 FKBP15Q5T1M5 1219 aa7.88□□□□□ -1.15
SF3B1-212ENST00000496458 SPTY2D1Q68D10 685 aaPredicted RBP7.88□□□□□ -1.15
SF3B1-212ENST00000496458 MSL3Q8N5Y2 521 aaKnown RBP7.88□□□□□ -1.15
SF3B1-212ENST00000496458 COG1Q8WTW3 980 aa7.88□□□□□ -1.15
SF3B1-212ENST00000496458 NRP1O14786 923 aa7.87□□□□□ -1.15
SF3B1-212ENST00000496458 PRKD3O94806 890 aa7.87□□□□□ -1.15
SF3B1-212ENST00000496458 ACRV1P26436 265 aa7.87□□□□□ -1.15
SF3B1-212ENST00000496458 TAS1R1Q7RTX1 841 aa7.87□□□□□ -1.15
SF3B1-212ENST00000496458 LMBR1Q8WVP7 490 aa7.87□□□□□ -1.15
SF3B1-212ENST00000496458 EXTL1Q92935 676 aa7.87□□□□□ -1.15
SF3B1-212ENST00000496458 C14orf119Q9NWQ9 140 aa7.87□□□□□ -1.15
SF3B1-212ENST00000496458 HECAQ9UBI9 543 aaPredicted RBP7.87□□□□□ -1.15
SF3B1-212ENST00000496458 DPP7Q9UHL4 492 aa7.87□□□□□ -1.15
SF3B1-212ENST00000496458 SBNO2Q9Y2G9 1366 aa7.86□□□□□ -1.15
SF3B1-212ENST00000496458 CYP27B1O15528 508 aa7.86□□□□□ -1.15
SF3B1-212ENST00000496458 PRAMEF4O60810 478 aa7.86□□□□□ -1.15
SF3B1-212ENST00000496458 STC2O76061 302 aa7.86□□□□□ -1.15
SF3B1-212ENST00000496458 RNF187Q5TA31 235 aaPredicted RBP7.86□□□□□ -1.15
SF3B1-212ENST00000496458 RNF219Q5W0B1 726 aaPredicted RBP7.86□□□□□ -1.15
SF3B1-212ENST00000496458 RNF207Q6ZRF8 634 aa7.86□□□□□ -1.15
SF3B1-212ENST00000496458 ANKRD35Q8N283 1001 aa7.86□□□□□ -1.15
SF3B1-212ENST00000496458 AHCYL2Q96HN2 611 aaKnown RBP7.86□□□□□ -1.15
SF3B1-212ENST00000496458 ZNF512Q96ME7 567 aaPredicted RBP7.86□□□□□ -1.15
SF3B1-212ENST00000496458 QRSL1Q9H0R6 528 aaKnown RBP7.86□□□□□ -1.15
SF3B1-212ENST00000496458 MCM8Q9UJA3 840 aa7.86□□□□□ -1.15
SF3B1-212ENST00000496458 GIT1Q9Y2X7 761 aa7.86□□□□□ -1.15
SF3B1-212ENST00000496458 CADPSQ9ULU8 1353 aa7.85□□□□□ -1.15
SF3B1-212ENST00000496458 TMEM127O75204 238 aa7.85□□□□□ -1.15
SF3B1-212ENST00000496458 LTA4HP09960 611 aaKnown RBP7.85□□□□□ -1.15
SF3B1-212ENST00000496458 CASRP41180 1078 aa7.85□□□□□ -1.15
SF3B1-212ENST00000496458 CDK17Q00537 523 aa7.85□□□□□ -1.15
SF3B1-212ENST00000496458 CRHR2Q13324 411 aa7.85□□□□□ -1.15
SF3B1-212ENST00000496458 UBE3CQ15386 1083 aa7.85□□□□□ -1.15
SF3B1-212ENST00000496458 FAM214AQ32MH5 1076 aa7.85□□□□□ -1.15
SF3B1-212ENST00000496458 OR5M3Q8NGP4 307 aa7.85□□□□□ -1.15
SF3B1-212ENST00000496458 MIEF2Q96C03 454 aa7.85□□□□□ -1.15
SF3B1-212ENST00000496458 RAX2Q96IS3 184 aa7.85□□□□□ -1.15
SF3B1-212ENST00000496458 CFBP00751 764 aa7.84□□□□□ -1.15
SF3B1-212ENST00000496458 AMHP03971 560 aa7.84□□□□□ -1.15
SF3B1-212ENST00000496458 CCT2P78371 535 aaKnown RBP7.84□□□□□ -1.15
SF3B1-212ENST00000496458 DUSP2Q05923 314 aa7.84□□□□□ -1.15
SF3B1-212ENST00000496458 FAPQ12884 760 aa7.84□□□□□ -1.15
SF3B1-212ENST00000496458 MFSD5Q6N075 450 aa7.84□□□□□ -1.15
SF3B1-212ENST00000496458 ZNF662Q6ZS27 426 aa7.84□□□□□ -1.15
SF3B1-212ENST00000496458 DDX42Q86XP3 938 aaKnown RBP eCLIP7.84□□□□□ -1.15
SF3B1-212ENST00000496458 C1orf210Q8IVY1 113 aa7.84□□□□□ -1.15
SF3B1-212ENST00000496458 ELOA2Q8IYF1 753 aaPredicted RBP7.84□□□□□ -1.15
SF3B1-212ENST00000496458 THEMISQ8N1K5 641 aaPredicted RBP7.84□□□□□ -1.15
SF3B1-212ENST00000496458 MB21D1Q8N884 522 aa7.84□□□□□ -1.15
SF3B1-212ENST00000496458 VPS11Q9H270 941 aa7.84□□□□□ -1.15
SF3B1-212ENST00000496458 EPC1Q9H2F5 836 aa7.84□□□□□ -1.15
SF3B1-212ENST00000496458 WNT3AP56704 352 aa7.83□□□□□ -1.16
SF3B1-212ENST00000496458 MEF2AQ02078 507 aaPredicted RBP7.83□□□□□ -1.16
SF3B1-212ENST00000496458 ABHD15Q6UXT9 468 aa7.83□□□□□ -1.16
SF3B1-212ENST00000496458 Q6ZRM9 215 aa7.83□□□□□ -1.16
SF3B1-212ENST00000496458 IL17DQ8TAD2 202 aa7.83□□□□□ -1.16
SF3B1-212ENST00000496458 AUTS2Q8WXX7 1259 aa7.83□□□□□ -1.16
SF3B1-212ENST00000496458 ZNF747Q9BV97 191 aa7.83□□□□□ -1.16
SF3B1-212ENST00000496458 ENKD1Q9H0I2 346 aa7.83□□□□□ -1.16
SF3B1-212ENST00000496458 PLSCR1O15162 318 aa7.82□□□□□ -1.16
SF3B1-212ENST00000496458 GNAT2P19087 354 aa7.82□□□□□ -1.16
SF3B1-212ENST00000496458 SCNN1GP51170 649 aa7.82□□□□□ -1.16
SF3B1-212ENST00000496458 MRPS9P82933 396 aaKnown RBP7.82□□□□□ -1.16
SF3B1-212ENST00000496458 ZXDAP98168 799 aa7.82□□□□□ -1.16
SF3B1-212ENST00000496458 RRP1BQ14684 758 aaKnown RBP7.82□□□□□ -1.16
SF3B1-212ENST00000496458 TOR2AQ5JU69 321 aa7.82□□□□□ -1.16
SF3B1-212ENST00000496458 GSPT2Q8IYD1 628 aaKnown RBP7.82□□□□□ -1.16
SF3B1-212ENST00000496458 TSPEARQ8WU66 669 aa7.82□□□□□ -1.16
SF3B1-212ENST00000496458 ORAI2Q96SN7 254 aa7.82□□□□□ -1.16
SF3B1-212ENST00000496458 KRTAP23-1A1A580 65 aa7.81□□□□□ -1.16
SF3B1-212ENST00000496458 MFAP3LO75121 409 aa7.81□□□□□ -1.16
SF3B1-212ENST00000496458 IPO13O94829 963 aaKnown RBP7.81□□□□□ -1.16
SF3B1-212ENST00000496458 GYPEP15421 78 aa7.81□□□□□ -1.16
SF3B1-212ENST00000496458 CTSSP25774 331 aa7.81□□□□□ -1.16
SF3B1-212ENST00000496458 CANXP27824 592 aaKnown RBP7.81□□□□□ -1.16
SF3B1-212ENST00000496458 SRSF2Q01130 221 aaKnown RBP7.81□□□□□ -1.16
SF3B1-212ENST00000496458 GLB1L3Q8NCI6 653 aaPredicted RBP7.81□□□□□ -1.16
SF3B1-212ENST00000496458 SNX33Q8WV41 574 aa7.81□□□□□ -1.16
SF3B1-212ENST00000496458 ATXN2LQ8WWM7 1075 aaKnown RBP7.81□□□□□ -1.16
SF3B1-212ENST00000496458 IL17RAQ96F46 866 aa7.81□□□□□ -1.16
SF3B1-212ENST00000496458 CCM2LQ9NUG4 571 aaPredicted RBP7.81□□□□□ -1.16
SF3B1-212ENST00000496458 ATP8A1Q9Y2Q0 1164 aa7.81□□□□□ -1.16
SF3B1-212ENST00000496458 PHLDB1Q86UU1 1377 aa7.81□□□□□ -1.16
SF3B1-212ENST00000496458 HOXA3O43365 443 aaPredicted RBP7.8□□□□□ -1.16
SF3B1-212ENST00000496458 C1SP09871 688 aa7.8□□□□□ -1.16
SF3B1-212ENST00000496458 C6P13671 934 aa7.8□□□□□ -1.16
SF3B1-212ENST00000496458 MTHFD2P13995 350 aa7.8□□□□□ -1.16
SF3B1-212ENST00000496458 TACR2P21452 398 aa7.8□□□□□ -1.16
SF3B1-212ENST00000496458 GPR3P46089 330 aa7.8□□□□□ -1.16
SF3B1-212ENST00000496458 MAN2A2P49641 1150 aa7.8□□□□□ -1.16
SF3B1-212ENST00000496458 ERVK-21P61565 698 aa7.8□□□□□ -1.16
SF3B1-212ENST00000496458 FOXE3Q13461 319 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms