RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 INF2Q27J81 1249 aa16.11■□□□□ 0.17
MACF1-223ENST00000496360 INTS8Q75QN2 995 aaKnown RBP16.11■□□□□ 0.17
MACF1-223ENST00000496360 JAMLQ86YT9 394 aa16.11■□□□□ 0.17
MACF1-223ENST00000496360 RBM12BQ8IXT5 1001 aaKnown RBP16.11■□□□□ 0.17
MACF1-223ENST00000496360 ATL2Q8NHH9 583 aa16.11■□□□□ 0.17
MACF1-223ENST00000496360 LARP4BQ92615 738 aaKnown RBP16.11■□□□□ 0.17
MACF1-223ENST00000496360 MAGEB18Q96M61 343 aa16.11■□□□□ 0.17
MACF1-223ENST00000496360 GPR101Q96P66 508 aaPredicted RBP16.11■□□□□ 0.17
MACF1-223ENST00000496360 SYT15Q9BQS2 421 aa16.11■□□□□ 0.17
MACF1-223ENST00000496360 TRIM51Q9BSJ1 452 aa16.11■□□□□ 0.17
MACF1-223ENST00000496360 ARHGEF10LQ9HCE6 1279 aa16.11■□□□□ 0.17
MACF1-223ENST00000496360 LRRC4CQ9HCJ2 640 aa16.11■□□□□ 0.17
MACF1-223ENST00000496360 PDP2Q9P2J9 529 aa16.11■□□□□ 0.17
MACF1-223ENST00000496360 MYH4Q9Y623 1939 aa16.11■□□□□ 0.17
MACF1-223ENST00000496360 MYMKA6NI61 221 aa16.1■□□□□ 0.17
MACF1-223ENST00000496360 SPDYE5A6NIY4 337 aa16.1■□□□□ 0.17
MACF1-223ENST00000496360 YDJCA8MPS7 323 aa16.1■□□□□ 0.17
MACF1-223ENST00000496360 TRAFD1O14545 582 aaPredicted RBP16.1■□□□□ 0.17
MACF1-223ENST00000496360 RIPK2O43353 540 aa16.1■□□□□ 0.17
MACF1-223ENST00000496360 ECE2O60344 883 aa16.1■□□□□ 0.17
MACF1-223ENST00000496360 RAD17O75943 681 aa16.1■□□□□ 0.17
MACF1-223ENST00000496360 SKIP12755 728 aa16.1■□□□□ 0.17
MACF1-223ENST00000496360 CYP7A1P22680 504 aa16.1■□□□□ 0.17
MACF1-223ENST00000496360 EPS15P42566 896 aa16.1■□□□□ 0.17
MACF1-223ENST00000496360 TNIP1Q15025 636 aa16.1■□□□□ 0.17
MACF1-223ENST00000496360 MTFR1Q15390 333 aa16.1■□□□□ 0.17
MACF1-223ENST00000496360 EAPPQ56P03 285 aaPredicted RBP16.1■□□□□ 0.17
MACF1-223ENST00000496360 KCNV2Q8TDN2 545 aa16.1■□□□□ 0.17
MACF1-223ENST00000496360 FAM136AQ96C01 138 aa16.1■□□□□ 0.17
MACF1-223ENST00000496360 FGD4Q96M96 766 aa16.1■□□□□ 0.17
MACF1-223ENST00000496360 SPZ1Q9BXG8 430 aa16.1■□□□□ 0.17
MACF1-223ENST00000496360 RAB34Q9BZG1 259 aa16.1■□□□□ 0.17
MACF1-223ENST00000496360 ZC3H12CQ9C0D7 883 aaKnown RBP16.1■□□□□ 0.17
MACF1-223ENST00000496360 VCX3BQ9H321 246 aa16.1■□□□□ 0.17
MACF1-223ENST00000496360 VCX3AQ9NNX9 186 aa16.1■□□□□ 0.17
MACF1-223ENST00000496360 LRP2BPQ9P2M1 347 aa16.1■□□□□ 0.17
MACF1-223ENST00000496360 PPARDQ03181 441 aa16.1■□□□□ 0.17
MACF1-223ENST00000496360 OR52E8Q6IFG1 317 aa16.1■□□□□ 0.17
MACF1-223ENST00000496360 ARHGEF18Q6ZSZ5 1173 aa16.1■□□□□ 0.17
MACF1-223ENST00000496360 CYFIP1Q7L576 1253 aa16.1■□□□□ 0.17
MACF1-223ENST00000496360 ZNF571Q7Z3V5 609 aaPredicted RBP16.1■□□□□ 0.17
MACF1-223ENST00000496360 EXOC3L1Q86VI1 746 aa16.1■□□□□ 0.17
MACF1-223ENST00000496360 TIPINQ9BVW5 301 aa16.1■□□□□ 0.17
MACF1-223ENST00000496360 DBNDD1Q9H9R9 158 aa16.1■□□□□ 0.17
MACF1-223ENST00000496360 ATP8A2Q9NTI2 1148 aa16.1■□□□□ 0.17
MACF1-223ENST00000496360 PCYOX1Q9UHG3 505 aa16.1■□□□□ 0.17
MACF1-223ENST00000496360 PNMA3Q9UL41 463 aa16.1■□□□□ 0.17
MACF1-223ENST00000496360 MINPP1Q9UNW1 487 aa16.1■□□□□ 0.17
MACF1-223ENST00000496360 COL1A1P02452 1464 aaPredicted RBP16.09■□□□□ 0.17
MACF1-223ENST00000496360 TRAF5O00463 557 aa16.09■□□□□ 0.17
MACF1-223ENST00000496360 CREB3O43889 395 aa16.09■□□□□ 0.17
MACF1-223ENST00000496360 PHF2O75151 1096 aa16.09■□□□□ 0.17
MACF1-223ENST00000496360 COQ9O75208 318 aa16.09■□□□□ 0.17
MACF1-223ENST00000496360 DCTN3O75935 186 aa16.09■□□□□ 0.17
MACF1-223ENST00000496360 PENKP01210 267 aaPredicted RBP16.09■□□□□ 0.17
MACF1-223ENST00000496360 ATP2B4P23634 1241 aa16.09■□□□□ 0.17
MACF1-223ENST00000496360 VHLP40337 213 aa16.09■□□□□ 0.17
MACF1-223ENST00000496360 MAGEA8P43361 318 aa16.09■□□□□ 0.17
MACF1-223ENST00000496360 YARSP54577 528 aaKnown RBP16.09■□□□□ 0.17
MACF1-223ENST00000496360 PLTPP55058 493 aa16.09■□□□□ 0.17
MACF1-223ENST00000496360 OCRLQ01968 901 aa16.09■□□□□ 0.17
MACF1-223ENST00000496360 NONOQ15233 471 aaKnown RBP eCLIP16.09■□□□□ 0.17
MACF1-223ENST00000496360 PPP1R21Q6ZMI0 780 aa16.09■□□□□ 0.17
MACF1-223ENST00000496360 MIPOL1Q8TD10 442 aa16.09■□□□□ 0.17
MACF1-223ENST00000496360 MAIP1Q8WWC4 291 aa16.09■□□□□ 0.17
MACF1-223ENST00000496360 BORCS6Q96GS4 357 aa16.09■□□□□ 0.17
MACF1-223ENST00000496360 CDK5RAP3Q96JB5 506 aa16.09■□□□□ 0.17
MACF1-223ENST00000496360 NUDCD1Q96RS6 583 aa16.09■□□□□ 0.17
MACF1-223ENST00000496360 LZTS2Q9BRK4 669 aa16.09■□□□□ 0.17
MACF1-223ENST00000496360 MMTAG2Q9BU76 263 aaKnown RBP16.09■□□□□ 0.17
MACF1-223ENST00000496360 BLOC1S4Q9NUP1 217 aa16.09■□□□□ 0.17
MACF1-223ENST00000496360 LARSQ9P2J5 1176 aaKnown RBP16.09■□□□□ 0.17
MACF1-223ENST00000496360 USP20Q9Y2K6 914 aa16.09■□□□□ 0.17
MACF1-223ENST00000496360 ACTL7BQ9Y614 415 aa16.09■□□□□ 0.17
MACF1-223ENST00000496360 FXR2P51116 673 aaKnown RBP eCLIP16.09■□□□□ 0.173e-7■■■■□ 21.2
MACF1-223ENST00000496360 STRN3Q13033 797 aa16.09■□□□□ 0.17
MACF1-223ENST00000496360 GSTA3Q16772 222 aa16.09■□□□□ 0.17
MACF1-223ENST00000496360 DOK7Q18PE1 504 aa16.09■□□□□ 0.17
MACF1-223ENST00000496360 MUM1Q2TAK8 710 aa16.09■□□□□ 0.17
MACF1-223ENST00000496360 FBXO25Q8TCJ0 367 aa16.09■□□□□ 0.17
MACF1-223ENST00000496360 UTP4Q969X6 686 aaKnown RBP16.09■□□□□ 0.17
MACF1-223ENST00000496360 BARHL2Q9NY43 387 aa16.09■□□□□ 0.17
MACF1-223ENST00000496360 GRHL1Q9NZI5 618 aa16.09■□□□□ 0.17
MACF1-223ENST00000496360 NKX1-2Q9UD57 310 aaPredicted RBP16.09■□□□□ 0.17
MACF1-223ENST00000496360 SEC63Q9UGP8 760 aaKnown RBP16.09■□□□□ 0.17
MACF1-223ENST00000496360 SYNGAP1Q96PV0 1343 aa16.08■□□□□ 0.17
MACF1-223ENST00000496360 CEP350Q5VT06 3117 aa16.08■□□□□ 0.17
MACF1-223ENST00000496360 TMEM120BA0PK00 339 aa16.08■□□□□ 0.16
MACF1-223ENST00000496360 MAGEA13PA6NCF6 341 aa16.08■□□□□ 0.16
MACF1-223ENST00000496360 NVLO15381 856 aaKnown RBP16.08■□□□□ 0.16
MACF1-223ENST00000496360 DDX3YO15523 660 aaKnown RBP16.08■□□□□ 0.16
MACF1-223ENST00000496360 TCEA3O75764 348 aa16.08■□□□□ 0.16
MACF1-223ENST00000496360 GMPSP49915 693 aaPredicted RBP16.08■□□□□ 0.16
MACF1-223ENST00000496360 POLGP54098 1239 aaPredicted RBP16.08■□□□□ 0.16
MACF1-223ENST00000496360 GRB10Q13322 594 aa16.08■□□□□ 0.16
MACF1-223ENST00000496360 TMEM266Q2M3C6 531 aa16.08■□□□□ 0.16
MACF1-223ENST00000496360 EDRF1Q3B7T1 1238 aa16.08■□□□□ 0.16
MACF1-223ENST00000496360 MIGA1Q8NAN2 632 aa16.08■□□□□ 0.16
MACF1-223ENST00000496360 RFFLQ8WZ73 363 aa16.08■□□□□ 0.16
MACF1-223ENST00000496360 RAD54LQ92698 747 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms