RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 PBX3P40426 434 aa17.44■□□□□ 0.38
HDAC4-213ENST00000496347 BCAR1P56945 870 aa17.44■□□□□ 0.38
HDAC4-213ENST00000496347 PTGDRQ13258 359 aa17.44■□□□□ 0.38
HDAC4-213ENST00000496347 ADAM15Q13444 863 aa17.44■□□□□ 0.38
HDAC4-213ENST00000496347 PDIA5Q14554 519 aa17.44■□□□□ 0.38
HDAC4-213ENST00000496347 DUSP6Q16828 381 aa17.44■□□□□ 0.38
HDAC4-213ENST00000496347 UBXN11Q5T124 520 aa17.44■□□□□ 0.38
HDAC4-213ENST00000496347 FAM178BQ8IXR5 827 aa17.44■□□□□ 0.38
HDAC4-213ENST00000496347 MICAL1Q8TDZ2 1067 aa17.44■□□□□ 0.38
HDAC4-213ENST00000496347 TMEM169Q96HH4 297 aa17.44■□□□□ 0.38
HDAC4-213ENST00000496347 PRIMPOLQ96LW4 560 aa17.44■□□□□ 0.38
HDAC4-213ENST00000496347 TLE6Q9H808 572 aa17.44■□□□□ 0.38
HDAC4-213ENST00000496347 RSAD1Q9HA92 442 aa17.44■□□□□ 0.38
HDAC4-213ENST00000496347 UBN1Q9NPG3 1134 aa17.44■□□□□ 0.38
HDAC4-213ENST00000496347 LRWD1Q9UFC0 647 aa17.44■□□□□ 0.38
HDAC4-213ENST00000496347 CD207Q9UJ71 328 aa17.44■□□□□ 0.38
HDAC4-213ENST00000496347 INPP5FQ9Y2H2 1132 aa17.44■□□□□ 0.38
HDAC4-213ENST00000496347 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.44■□□□□ 0.38
HDAC4-213ENST00000496347 PCDHB6Q9Y5E3 794 aa17.44■□□□□ 0.38
HDAC4-213ENST00000496347 PCDHGC5Q9Y5F6 944 aa17.44■□□□□ 0.38
HDAC4-213ENST00000496347 MEIS3P2A8K0S8 358 aa17.43■□□□□ 0.38
HDAC4-213ENST00000496347 H3BQV1 296 aa17.43■□□□□ 0.38
HDAC4-213ENST00000496347 LINC01565O15544 149 aa17.43■□□□□ 0.38
HDAC4-213ENST00000496347 OFD1O75665 1012 aa17.43■□□□□ 0.38
HDAC4-213ENST00000496347 GJB2P29033 226 aa17.43■□□□□ 0.38
HDAC4-213ENST00000496347 CCT6AP40227 531 aaKnown RBP17.43■□□□□ 0.38
HDAC4-213ENST00000496347 RNASELQ05823 741 aaKnown RBP17.43■□□□□ 0.38
HDAC4-213ENST00000496347 DLX2Q07687 328 aaPredicted RBP17.43■□□□□ 0.38
HDAC4-213ENST00000496347 COASYQ13057 564 aa17.43■□□□□ 0.38
HDAC4-213ENST00000496347 SMAD2Q15796 467 aaKnown RBP17.43■□□□□ 0.38
HDAC4-213ENST00000496347 AMHR2Q16671 573 aa17.43■□□□□ 0.38
HDAC4-213ENST00000496347 MCTP1Q6DN14 999 aa17.43■□□□□ 0.38
HDAC4-213ENST00000496347 PADI6Q6TGC4 694 aa17.43■□□□□ 0.38
HDAC4-213ENST00000496347 PPP4R3CPQ6ZMV5 832 aa17.43■□□□□ 0.38
HDAC4-213ENST00000496347 AGMOQ6ZNB7 445 aa17.43■□□□□ 0.38
HDAC4-213ENST00000496347 HACE1Q8IYU2 909 aa17.43■□□□□ 0.38
HDAC4-213ENST00000496347 SMRP1Q8NCR6 262 aa17.43■□□□□ 0.38
HDAC4-213ENST00000496347 MSLNLQ96KJ4 702 aa17.43■□□□□ 0.38
HDAC4-213ENST00000496347 C2orf40Q9H1Z8 148 aa17.43■□□□□ 0.38
HDAC4-213ENST00000496347 IGFLR1Q9H665 355 aa17.43■□□□□ 0.38
HDAC4-213ENST00000496347 GPRC5CQ9NQ84 441 aa17.43■□□□□ 0.38
HDAC4-213ENST00000496347 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.43■□□□□ 0.38
HDAC4-213ENST00000496347 KANSL3Q9P2N6 904 aa17.43■□□□□ 0.38
HDAC4-213ENST00000496347 STK39Q9UEW8 545 aa17.43■□□□□ 0.38
HDAC4-213ENST00000496347 SMC3Q9UQE7 1217 aa17.43■□□□□ 0.38
HDAC4-213ENST00000496347 TRIOO75962 3097 aa17.42■□□□□ 0.38
HDAC4-213ENST00000496347 LRRIQ4A6NIV6 560 aa17.42■□□□□ 0.38
HDAC4-213ENST00000496347 INPPL1O15357 1258 aa17.42■□□□□ 0.38
HDAC4-213ENST00000496347 EYA4O95677 639 aa17.42■□□□□ 0.38
HDAC4-213ENST00000496347 GLP2RO95838 553 aa17.42■□□□□ 0.38
HDAC4-213ENST00000496347 ARF4P18085 180 aaPredicted RBP17.42■□□□□ 0.38
HDAC4-213ENST00000496347 CYP11B2P19099 503 aa17.42■□□□□ 0.38
HDAC4-213ENST00000496347 ERVFC1P60507 584 aa17.42■□□□□ 0.38
HDAC4-213ENST00000496347 ZP2Q05996 745 aa17.42■□□□□ 0.38
HDAC4-213ENST00000496347 SMC1AQ14683 1233 aaKnown RBP17.42■□□□□ 0.38
HDAC4-213ENST00000496347 BMS1Q14692 1282 aaKnown RBP17.42■□□□□ 0.38
HDAC4-213ENST00000496347 PPP2R5AQ15172 486 aa17.42■□□□□ 0.38
HDAC4-213ENST00000496347 PLPP4Q5VZY2 271 aa17.42■□□□□ 0.38
HDAC4-213ENST00000496347 ZBTB8OSQ8IWT0 167 aa17.42■□□□□ 0.38
HDAC4-213ENST00000496347 SNX29Q8TEQ0 813 aa17.42■□□□□ 0.38
HDAC4-213ENST00000496347 POP1Q99575 1024 aaKnown RBP17.42■□□□□ 0.38
HDAC4-213ENST00000496347 CSRNP2Q9H175 543 aa17.42■□□□□ 0.38
HDAC4-213ENST00000496347 IPPQ9Y573 584 aa17.42■□□□□ 0.38
HDAC4-213ENST00000496347 MBTPS2O43462 519 aa17.41■□□□□ 0.38
HDAC4-213ENST00000496347 ATP2C1P98194 919 aaPredicted RBP17.41■□□□□ 0.38
HDAC4-213ENST00000496347 FAM187BQ17R55 369 aa17.41■□□□□ 0.38
HDAC4-213ENST00000496347 LONRF3Q496Y0 759 aa17.41■□□□□ 0.38
HDAC4-213ENST00000496347 RBM23Q86U06 439 aaKnown RBP17.41■□□□□ 0.38
HDAC4-213ENST00000496347 ADHFE1Q8IWW8 467 aa17.41■□□□□ 0.38
HDAC4-213ENST00000496347 GJD3Q8N144 294 aa17.41■□□□□ 0.38
HDAC4-213ENST00000496347 SMG8Q8ND04 991 aaKnown RBP17.41■□□□□ 0.38
HDAC4-213ENST00000496347 TMEM175Q9BSA9 504 aa17.41■□□□□ 0.38
HDAC4-213ENST00000496347 TRIM6Q9C030 488 aaPredicted RBP17.41■□□□□ 0.38
HDAC4-213ENST00000496347 NRDE2Q9H7Z3 1164 aa17.41■□□□□ 0.38
HDAC4-213ENST00000496347 PRMT7Q9NVM4 692 aaPredicted RBP17.41■□□□□ 0.38
HDAC4-213ENST00000496347 CLEC1BQ9P126 229 aa17.41■□□□□ 0.38
HDAC4-213ENST00000496347 DAXXQ9UER7 740 aaPredicted RBP17.41■□□□□ 0.38
HDAC4-213ENST00000496347 A0A087WWV3 80 aa17.4■□□□□ 0.38
HDAC4-213ENST00000496347 ITGA4P13612 1032 aa17.4■□□□□ 0.38
HDAC4-213ENST00000496347 NAMPTP43490 491 aa17.4■□□□□ 0.38
HDAC4-213ENST00000496347 CLUL1Q15846 466 aa17.4■□□□□ 0.38
HDAC4-213ENST00000496347 KRT79Q5XKE5 535 aa17.4■□□□□ 0.38
HDAC4-213ENST00000496347 SLC27A1Q6PCB7 646 aa17.4■□□□□ 0.38
HDAC4-213ENST00000496347 DTHD1Q6ZMT9 781 aa17.4■□□□□ 0.38
HDAC4-213ENST00000496347 TMC7Q7Z402 723 aa17.4■□□□□ 0.38
HDAC4-213ENST00000496347 TMEM173Q86WV6 379 aaPredicted RBP17.4■□□□□ 0.38
HDAC4-213ENST00000496347 KIFAP3Q92845 792 aa17.4■□□□□ 0.38
HDAC4-213ENST00000496347 IGSF21Q96ID5 467 aa17.4■□□□□ 0.38
HDAC4-213ENST00000496347 CPB2Q96IY4 423 aa17.4■□□□□ 0.38
HDAC4-213ENST00000496347 C1QTNF1Q9BXJ1 281 aa17.4■□□□□ 0.38
HDAC4-213ENST00000496347 EIF2AQ9BY44 585 aaKnown RBP17.4■□□□□ 0.38
HDAC4-213ENST00000496347 ZBP1Q9H171 429 aa17.4■□□□□ 0.38
HDAC4-213ENST00000496347 BHMT2Q9H2M3 363 aa17.4■□□□□ 0.38
HDAC4-213ENST00000496347 DDX19AQ9NUU7 478 aaKnown RBP17.4■□□□□ 0.38
HDAC4-213ENST00000496347 BARX2Q9UMQ3 279 aaPredicted RBP17.4■□□□□ 0.38
HDAC4-213ENST00000496347 MYH11P35749 1972 aa17.39■□□□□ 0.37
HDAC4-213ENST00000496347 A0A1B0GUA9 196 aa17.39■□□□□ 0.37
HDAC4-213ENST00000496347 B4GALT5O43286 388 aa17.39■□□□□ 0.37
HDAC4-213ENST00000496347 GALTP07902 379 aa17.39■□□□□ 0.37
HDAC4-213ENST00000496347 SSTR3P32745 418 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms