RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 AGMOQ6ZNB7 445 aa13.13□□□□□ -0.31
THBS3-208ENST00000496332 SLC39A11Q8N1S5 342 aa13.13□□□□□ -0.31
THBS3-208ENST00000496332 EFHBQ8N7U6 833 aa13.13□□□□□ -0.31
THBS3-208ENST00000496332 IGSF22Q8N9C0 903 aa13.13□□□□□ -0.31
THBS3-208ENST00000496332 SNX29Q8TEQ0 813 aa13.13□□□□□ -0.31
THBS3-208ENST00000496332 CPB2Q96IY4 423 aa13.13□□□□□ -0.31
THBS3-208ENST00000496332 NFKBIZQ9BYH8 718 aa13.13□□□□□ -0.31
THBS3-208ENST00000496332 RAB34Q9BZG1 259 aa13.13□□□□□ -0.31
THBS3-208ENST00000496332 TLE6Q9H808 572 aa13.13□□□□□ -0.31
THBS3-208ENST00000496332 TBC1D13Q9NVG8 400 aa13.13□□□□□ -0.31
THBS3-208ENST00000496332 KIAA1024Q9UPX6 916 aa13.13□□□□□ -0.31
THBS3-208ENST00000496332 STK24Q9Y6E0 443 aa13.13□□□□□ -0.31
THBS3-208ENST00000496332 MYO7AQ13402 2215 aa13.13□□□□□ -0.31
THBS3-208ENST00000496332 BRWD1Q9NSI6 2320 aa13.12□□□□□ -0.31
THBS3-208ENST00000496332 LRRIQ4A6NIV6 560 aa13.12□□□□□ -0.31
THBS3-208ENST00000496332 PP2D1A8MPX8 630 aa13.12□□□□□ -0.31
THBS3-208ENST00000496332 PER2O15055 1255 aa13.12□□□□□ -0.31
THBS3-208ENST00000496332 ZC3H11AO75152 810 aaKnown RBP eCLIP13.12□□□□□ -0.31
THBS3-208ENST00000496332 TBX10O75333 385 aa13.12□□□□□ -0.31
THBS3-208ENST00000496332 CYP11B2P19099 503 aa13.12□□□□□ -0.31
THBS3-208ENST00000496332 NCLP19338 710 aaKnown RBP13.12□□□□□ -0.31
THBS3-208ENST00000496332 PRPHP41219 470 aa13.12□□□□□ -0.31
THBS3-208ENST00000496332 NDUFV1P49821 464 aa13.12□□□□□ -0.31
THBS3-208ENST00000496332 RNASELQ05823 741 aaKnown RBP13.12□□□□□ -0.31
THBS3-208ENST00000496332 PLPP4Q5VZY2 271 aa13.12□□□□□ -0.31
THBS3-208ENST00000496332 LARP1BQ659C4 914 aaKnown RBP13.12□□□□□ -0.31
THBS3-208ENST00000496332 NOTUMQ6P988 496 aa13.12□□□□□ -0.31
THBS3-208ENST00000496332 SMG8Q8ND04 991 aaKnown RBP13.12□□□□□ -0.31
THBS3-208ENST00000496332 CNNM3Q8NE01 707 aa13.12□□□□□ -0.31
THBS3-208ENST00000496332 URGCPQ8TCY9 931 aa13.12□□□□□ -0.31
THBS3-208ENST00000496332 CCDC51Q96ER9 411 aa13.12□□□□□ -0.31
THBS3-208ENST00000496332 TCF25Q9BQ70 676 aa13.12□□□□□ -0.31
THBS3-208ENST00000496332 EIF2AQ9BY44 585 aaKnown RBP13.12□□□□□ -0.31
THBS3-208ENST00000496332 BACH2Q9BYV9 841 aa13.12□□□□□ -0.31
THBS3-208ENST00000496332 GBP3Q9H0R5 595 aa13.12□□□□□ -0.31
THBS3-208ENST00000496332 BHMT2Q9H2M3 363 aa13.12□□□□□ -0.31
THBS3-208ENST00000496332 NRDE2Q9H7Z3 1164 aa13.12□□□□□ -0.31
THBS3-208ENST00000496332 RSAD1Q9HA92 442 aa13.12□□□□□ -0.31
THBS3-208ENST00000496332 ENTPD7Q9NQZ7 604 aa13.12□□□□□ -0.31
THBS3-208ENST00000496332 DDX19AQ9NUU7 478 aaKnown RBP13.12□□□□□ -0.31
THBS3-208ENST00000496332 CNTNAP2Q9UHC6 1331 aa13.12□□□□□ -0.31
THBS3-208ENST00000496332 ATG2AQ2TAZ0 1938 aa13.11□□□□□ -0.31
THBS3-208ENST00000496332 PLXNA4Q9HCM2 1894 aa13.11□□□□□ -0.31
THBS3-208ENST00000496332 HIDE1A8MVS5 230 aa13.11□□□□□ -0.31
THBS3-208ENST00000496332 B4GALT5O43286 388 aa13.11□□□□□ -0.31
THBS3-208ENST00000496332 ITGA4P13612 1032 aa13.11□□□□□ -0.31
THBS3-208ENST00000496332 ARF4P18085 180 aaPredicted RBP13.11□□□□□ -0.31
THBS3-208ENST00000496332 CDC25AP30304 524 aa13.11□□□□□ -0.31
THBS3-208ENST00000496332 AFF1P51825 1210 aaKnown RBP13.11□□□□□ -0.31
THBS3-208ENST00000496332 DUSP6Q16828 381 aa13.11□□□□□ -0.31
THBS3-208ENST00000496332 KRT79Q5XKE5 535 aa13.11□□□□□ -0.31
THBS3-208ENST00000496332 TMC7Q7Z402 723 aa13.11□□□□□ -0.31
THBS3-208ENST00000496332 ZNF280BQ86YH2 543 aa13.11□□□□□ -0.31
THBS3-208ENST00000496332 ZBTB8OSQ8IWT0 167 aa13.11□□□□□ -0.31
THBS3-208ENST00000496332 FAM178BQ8IXR5 827 aa13.11□□□□□ -0.31
THBS3-208ENST00000496332 CSRNP2Q9H175 543 aa13.11□□□□□ -0.31
THBS3-208ENST00000496332 POLD4Q9HCU8 107 aa13.11□□□□□ -0.31
THBS3-208ENST00000496332 NGRNQ9NPE2 291 aaKnown RBP13.11□□□□□ -0.31
THBS3-208ENST00000496332 UBN1Q9NPG3 1134 aa13.11□□□□□ -0.31
THBS3-208ENST00000496332 CLEC1BQ9P126 229 aa13.11□□□□□ -0.31
THBS3-208ENST00000496332 DNAJB4Q9UDY4 337 aa13.11□□□□□ -0.31
THBS3-208ENST00000496332 CD207Q9UJ71 328 aa13.11□□□□□ -0.31
THBS3-208ENST00000496332 FAM50BQ9Y247 325 aa13.11□□□□□ -0.31
THBS3-208ENST00000496332 IPPQ9Y573 584 aa13.11□□□□□ -0.31
THBS3-208ENST00000496332 E9PMD0 336 aa13.1□□□□□ -0.31
THBS3-208ENST00000496332 GLP2RO95838 553 aa13.1□□□□□ -0.31
THBS3-208ENST00000496332 POMCP01189 267 aa13.1□□□□□ -0.31
THBS3-208ENST00000496332 GALTP07902 379 aa13.1□□□□□ -0.31
THBS3-208ENST00000496332 RBM10P98175 930 aaKnown RBP13.1□□□□□ -0.31
THBS3-208ENST00000496332 ATP2C1P98194 919 aaPredicted RBP13.1□□□□□ -0.31
THBS3-208ENST00000496332 CUL4AQ13619 759 aa13.1□□□□□ -0.31
THBS3-208ENST00000496332 CDCA2Q69YH5 1023 aaPredicted RBP13.1□□□□□ -0.31
THBS3-208ENST00000496332 SLC27A1Q6PCB7 646 aa13.1□□□□□ -0.31
THBS3-208ENST00000496332 TMEM173Q86WV6 379 aaPredicted RBP13.1□□□□□ -0.31
THBS3-208ENST00000496332 CDR2LQ86X02 465 aaPredicted RBP13.1□□□□□ -0.31
THBS3-208ENST00000496332 BSNDQ8WZ55 320 aa13.1□□□□□ -0.31
THBS3-208ENST00000496332 TMEM169Q96HH4 297 aa13.1□□□□□ -0.31
THBS3-208ENST00000496332 MSLNLQ96KJ4 702 aa13.1□□□□□ -0.31
THBS3-208ENST00000496332 CDCA3Q99618 268 aaPredicted RBP13.1□□□□□ -0.31
THBS3-208ENST00000496332 APOL6Q9BWW8 343 aa13.1□□□□□ -0.31
THBS3-208ENST00000496332 TRIM6Q9C030 488 aaPredicted RBP13.1□□□□□ -0.31
THBS3-208ENST00000496332 C2orf40Q9H1Z8 148 aa13.1□□□□□ -0.31
THBS3-208ENST00000496332 RNF39Q9H2S5 420 aa13.1□□□□□ -0.31
THBS3-208ENST00000496332 FZD8Q9H461 694 aa13.1□□□□□ -0.31
THBS3-208ENST00000496332 CD320Q9NPF0 282 aa13.1□□□□□ -0.31
THBS3-208ENST00000496332 PRMT7Q9NVM4 692 aaPredicted RBP13.1□□□□□ -0.31
THBS3-208ENST00000496332 KANSL3Q9P2N6 904 aa13.1□□□□□ -0.31
THBS3-208ENST00000496332 DNM3Q9UQ16 869 aa13.1□□□□□ -0.31
THBS3-208ENST00000496332 HES2Q9Y543 173 aa13.1□□□□□ -0.31
THBS3-208ENST00000496332 A0A1B0GUA9 196 aa13.09□□□□□ -0.31
THBS3-208ENST00000496332 CARNS1A5YM72 827 aa13.09□□□□□ -0.31
THBS3-208ENST00000496332 ARL5CA6NH57 179 aa13.09□□□□□ -0.31
THBS3-208ENST00000496332 MBTPS2O43462 519 aa13.09□□□□□ -0.31
THBS3-208ENST00000496332 B4GALT3O60512 393 aa13.09□□□□□ -0.31
THBS3-208ENST00000496332 DDHD2O94830 711 aa13.09□□□□□ -0.31
THBS3-208ENST00000496332 NPTXRO95502 500 aa13.09□□□□□ -0.31
THBS3-208ENST00000496332 EYA4O95677 639 aa13.09□□□□□ -0.31
THBS3-208ENST00000496332 NAMPTP43490 491 aa13.09□□□□□ -0.31
THBS3-208ENST00000496332 SLC11A1P49279 550 aa13.09□□□□□ -0.31
THBS3-208ENST00000496332 SMAD4Q13485 552 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms