RNA–Protein interactions for RNA: ENST00000495460.1

NUP58-214, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-214ENST00000495460 IRX6P78412 446 aaPredicted RBP16.84■□□□□ 0.29
NUP58-214ENST00000495460 POU5F1BQ06416 359 aa16.84■□□□□ 0.29
NUP58-214ENST00000495460 DRP2Q13474 957 aa16.84■□□□□ 0.29
NUP58-214ENST00000495460 PPP4R3AQ6IN85 833 aa16.84■□□□□ 0.29
NUP58-214ENST00000495460 GPR149Q86SP6 731 aa16.84■□□□□ 0.29
NUP58-214ENST00000495460 BLIDQ8IZY5 108 aa16.84■□□□□ 0.29
NUP58-214ENST00000495460 TMEM87AQ8NBN3 555 aa16.84■□□□□ 0.29
NUP58-214ENST00000495460 CMASQ8NFW8 434 aaPredicted RBP16.84■□□□□ 0.29
NUP58-214ENST00000495460 ATOH1Q92858 354 aaPredicted RBP16.84■□□□□ 0.29
NUP58-214ENST00000495460 ACSF2Q96CM8 615 aaPredicted RBP16.84■□□□□ 0.29
NUP58-214ENST00000495460 DHX33Q9H6R0 707 aaKnown RBP16.84■□□□□ 0.29
NUP58-214ENST00000495460 SFXN1Q9H9B4 322 aa16.84■□□□□ 0.29
NUP58-214ENST00000495460 ZSWIM6Q9HCJ5 1215 aa16.84■□□□□ 0.29
NUP58-214ENST00000495460 CYP26B1Q9NR63 512 aa16.84■□□□□ 0.29
NUP58-214ENST00000495460 AGPAT5Q9NUQ2 364 aa16.84■□□□□ 0.29
NUP58-214ENST00000495460 SEPT9Q9UHD8 586 aaPredicted RBP16.84■□□□□ 0.29
NUP58-214ENST00000495460 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.83■□□□□ 0.28
NUP58-214ENST00000495460 GFRA3O60609 400 aa16.83■□□□□ 0.28
NUP58-214ENST00000495460 ZC3H11AO75152 810 aaKnown RBP eCLIP16.83■□□□□ 0.28
NUP58-214ENST00000495460 CPA1P15085 419 aa16.83■□□□□ 0.28
NUP58-214ENST00000495460 QARSP47897 775 aaKnown RBP16.83■□□□□ 0.28
NUP58-214ENST00000495460 SSRP1Q08945 709 aaKnown RBP16.83■□□□□ 0.28
NUP58-214ENST00000495460 PDAP1Q13442 181 aaKnown RBP16.83■□□□□ 0.28
NUP58-214ENST00000495460 MTERF2Q49AM1 385 aa16.83■□□□□ 0.28
NUP58-214ENST00000495460 RUFY3Q7L099 469 aa16.83■□□□□ 0.28
NUP58-214ENST00000495460 OTOP3Q7RTS5 596 aa16.83■□□□□ 0.28
NUP58-214ENST00000495460 CABP7Q86V35 215 aa16.83■□□□□ 0.28
NUP58-214ENST00000495460 RHPN2Q8IUC4 686 aa16.83■□□□□ 0.28
NUP58-214ENST00000495460 TDRD5Q8NAT2 981 aaKnown RBP16.83■□□□□ 0.28
NUP58-214ENST00000495460 HDAC7Q8WUI4 952 aa16.83■□□□□ 0.28
NUP58-214ENST00000495460 SLC7A3Q8WY07 619 aa16.83■□□□□ 0.28
NUP58-214ENST00000495460 NAP1L4Q99733 375 aaKnown RBP16.83■□□□□ 0.28
NUP58-214ENST00000495460 EMILIN2Q9BXX0 1053 aa16.83■□□□□ 0.28
NUP58-214ENST00000495460 TM6SF1Q9BZW5 370 aa16.83■□□□□ 0.28
NUP58-214ENST00000495460 KCNMB3Q9NPA1 279 aa16.83■□□□□ 0.28
NUP58-214ENST00000495460 PIN4Q9Y237 131 aaKnown RBP16.83■□□□□ 0.28
NUP58-214ENST00000495460 ZNF292O60281 2723 aa16.83■□□□□ 0.28
NUP58-214ENST00000495460 FAM186AA6NE01 2351 aa16.82■□□□□ 0.28
NUP58-214ENST00000495460 DDX11L8A8MPP1 907 aa16.82■□□□□ 0.28
NUP58-214ENST00000495460 NT5C1B-RDH14C9J2C7 533 aa16.82■□□□□ 0.28
NUP58-214ENST00000495460 CHMP2AO43633 222 aa16.82■□□□□ 0.28
NUP58-214ENST00000495460 EFEMP2O95967 443 aa16.82■□□□□ 0.28
NUP58-214ENST00000495460 P4HBP07237 508 aaKnown RBP16.82■□□□□ 0.28
NUP58-214ENST00000495460 GCFC2P16383 781 aaKnown RBP16.82■□□□□ 0.28
NUP58-214ENST00000495460 FGFR4P22455 802 aa16.82■□□□□ 0.28
NUP58-214ENST00000495460 RFC5P40937 340 aa16.82■□□□□ 0.28
NUP58-214ENST00000495460 RNASELQ05823 741 aaKnown RBP16.82■□□□□ 0.28
NUP58-214ENST00000495460 PTPN14Q15678 1187 aa16.82■□□□□ 0.28
NUP58-214ENST00000495460 NPY5RQ15761 445 aa16.82■□□□□ 0.28
NUP58-214ENST00000495460 CPLX2Q6PUV4 134 aaKnown RBP16.82■□□□□ 0.28
NUP58-214ENST00000495460 CATSPER4Q7RTX7 472 aa16.82■□□□□ 0.28
NUP58-214ENST00000495460 KRT25Q7Z3Z0 450 aa16.82■□□□□ 0.28
NUP58-214ENST00000495460 TMEM173Q86WV6 379 aaPredicted RBP16.82■□□□□ 0.28
NUP58-214ENST00000495460 C4orf19Q8IY42 314 aa16.82■□□□□ 0.28
NUP58-214ENST00000495460 URGCPQ8TCY9 931 aa16.82■□□□□ 0.28
NUP58-214ENST00000495460 NXPE3Q969Y0 559 aa16.82■□□□□ 0.28
NUP58-214ENST00000495460 TSHZ2Q9NRE2 1034 aa16.82■□□□□ 0.28
NUP58-214ENST00000495460 DBR1Q9UK59 544 aaKnown RBP16.82■□□□□ 0.28
NUP58-214ENST00000495460 PCDHB2Q9Y5E7 798 aa16.82■□□□□ 0.28
NUP58-214ENST00000495460 CSDE1O75534 798 aaKnown RBP16.81■□□□□ 0.28
NUP58-214ENST00000495460 AXLP30530 894 aa16.81■□□□□ 0.28
NUP58-214ENST00000495460 HOXA11P31270 313 aaPredicted RBP16.81■□□□□ 0.28
NUP58-214ENST00000495460 CLCN4P51793 760 aa16.81■□□□□ 0.28
NUP58-214ENST00000495460 NONOQ15233 471 aaKnown RBP eCLIP16.81■□□□□ 0.28
NUP58-214ENST00000495460 RARS2Q5T160 578 aaKnown RBP16.81■□□□□ 0.28
NUP58-214ENST00000495460 ELMSAN1Q6PJG2 1045 aa16.81■□□□□ 0.28
NUP58-214ENST00000495460 AGMOQ6ZNB7 445 aa16.81■□□□□ 0.28
NUP58-214ENST00000495460 TCP11Q8WWU5 503 aa16.81■□□□□ 0.28
NUP58-214ENST00000495460 CCDC51Q96ER9 411 aa16.81■□□□□ 0.28
NUP58-214ENST00000495460 SNX27Q96L92 541 aa16.81■□□□□ 0.28
NUP58-214ENST00000495460 APOL5Q9BWW9 433 aa16.81■□□□□ 0.28
NUP58-214ENST00000495460 IGSF9Q9P2J2 1179 aa16.81■□□□□ 0.28
NUP58-214ENST00000495460 LIMD1Q9UGP4 676 aa16.81■□□□□ 0.28
NUP58-214ENST00000495460 DDX25Q9UHL0 483 aaKnown RBP16.81■□□□□ 0.28
NUP58-214ENST00000495460 COL4A3BPQ9Y5P4 624 aa16.81■□□□□ 0.28
NUP58-214ENST00000495460 DENND4AQ7Z401 1863 aa16.8■□□□□ 0.28
NUP58-214ENST00000495460 EPCAMP16422 314 aa16.8■□□□□ 0.28
NUP58-214ENST00000495460 NCLP19338 710 aaKnown RBP16.8■□□□□ 0.28
NUP58-214ENST00000495460 SLC11A1P49279 550 aa16.8■□□□□ 0.28
NUP58-214ENST00000495460 TDGQ13569 410 aa16.8■□□□□ 0.28
NUP58-214ENST00000495460 TOB2Q14106 344 aaPredicted RBP16.8■□□□□ 0.28
NUP58-214ENST00000495460 OTUD6AQ7L8S5 288 aa16.8■□□□□ 0.28
NUP58-214ENST00000495460 TMEM105Q8N8V8 129 aa16.8■□□□□ 0.28
NUP58-214ENST00000495460 PRPF31Q8WWY3 499 aaKnown RBP16.8■□□□□ 0.28
NUP58-214ENST00000495460 PSPC1Q8WXF1 523 aaKnown RBP16.8■□□□□ 0.28
NUP58-214ENST00000495460 ZNF668Q96K58 619 aaPredicted RBP16.8■□□□□ 0.28
NUP58-214ENST00000495460 KLHL5Q96PQ7 755 aa16.8■□□□□ 0.28
NUP58-214ENST00000495460 VN1R3Q9BXE9 311 aa16.8■□□□□ 0.28
NUP58-214ENST00000495460 KRTAP3-3Q9BYR6 98 aa16.8■□□□□ 0.28
NUP58-214ENST00000495460 KRTAP3-2Q9BYR7 98 aa16.8■□□□□ 0.28
NUP58-214ENST00000495460 RSAD1Q9HA92 442 aa16.8■□□□□ 0.28
NUP58-214ENST00000495460 MRPL17Q9NRX2 175 aaKnown RBP16.8■□□□□ 0.28
NUP58-214ENST00000495460 CIZ1Q9ULV3 898 aaPredicted RBP16.8■□□□□ 0.28
NUP58-214ENST00000495460 FAN1Q9Y2M0 1017 aa16.8■□□□□ 0.28
NUP58-214ENST00000495460 ZMYM2Q9UBW7 1377 aa16.79■□□□□ 0.28
NUP58-214ENST00000495460 CPLX1O14810 134 aa16.79■□□□□ 0.28
NUP58-214ENST00000495460 TDP2O95551 362 aa16.79■□□□□ 0.28
NUP58-214ENST00000495460 PDGFBP01127 241 aaPredicted RBP16.79■□□□□ 0.28
NUP58-214ENST00000495460 SOD2P04179 222 aa16.79■□□□□ 0.28
NUP58-214ENST00000495460 CCT2P78371 535 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms