RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 CSRNP2Q9H175 543 aa19.51■□□□□ 0.71
HDAC4-211ENST00000494800 ZSCAN16Q9H4T2 348 aaPredicted RBP19.51■□□□□ 0.71
HDAC4-211ENST00000494800 RSAD1Q9HA92 442 aa19.51■□□□□ 0.71
HDAC4-211ENST00000494800 KANSL3Q9P2N6 904 aa19.51■□□□□ 0.71
HDAC4-211ENST00000494800 DAXXQ9UER7 740 aaPredicted RBP19.51■□□□□ 0.71
HDAC4-211ENST00000494800 INPP5FQ9Y2H2 1132 aa19.51■□□□□ 0.71
HDAC4-211ENST00000494800 STX6O43752 255 aa19.5■□□□□ 0.71
HDAC4-211ENST00000494800 CSPG5O95196 566 aa19.5■□□□□ 0.71
HDAC4-211ENST00000494800 ITGA4P13612 1032 aa19.5■□□□□ 0.71
HDAC4-211ENST00000494800 NCLP19338 710 aaKnown RBP19.5■□□□□ 0.71
HDAC4-211ENST00000494800 EFNA5P52803 228 aa19.5■□□□□ 0.71
HDAC4-211ENST00000494800 HYIQ5T013 277 aa19.5■□□□□ 0.71
HDAC4-211ENST00000494800 PDE12Q6L8Q7 609 aaKnown RBP19.5■□□□□ 0.71
HDAC4-211ENST00000494800 SLC27A1Q6PCB7 646 aa19.5■□□□□ 0.71
HDAC4-211ENST00000494800 LRRC55Q6ZSA7 311 aa19.5■□□□□ 0.71
HDAC4-211ENST00000494800 MRPL10Q7Z7H8 261 aaKnown RBP19.5■□□□□ 0.71
HDAC4-211ENST00000494800 CABP7Q86V35 215 aa19.5■□□□□ 0.71
HDAC4-211ENST00000494800 MICAL1Q8TDZ2 1067 aa19.5■□□□□ 0.71
HDAC4-211ENST00000494800 CPB2Q96IY4 423 aa19.5■□□□□ 0.71
HDAC4-211ENST00000494800 MMTAG2Q9BU76 263 aaKnown RBP19.5■□□□□ 0.71
HDAC4-211ENST00000494800 UBE2ZQ9H832 354 aaPredicted RBP19.5■□□□□ 0.71
HDAC4-211ENST00000494800 SPG21Q9NZD8 308 aa19.5■□□□□ 0.71
HDAC4-211ENST00000494800 KCNG1Q9UIX4 513 aa19.5■□□□□ 0.71
HDAC4-211ENST00000494800 LZTS1Q9Y250 596 aa19.5■□□□□ 0.71
HDAC4-211ENST00000494800 FNDC1Q4ZHG4 1894 aaPredicted RBP19.5■□□□□ 0.71
HDAC4-211ENST00000494800 PHLPP2Q6ZVD8 1323 aa19.5■□□□□ 0.71
HDAC4-211ENST00000494800 OFD1O75665 1012 aa19.49■□□□□ 0.71
HDAC4-211ENST00000494800 SSBP05455 408 aaKnown RBP eCLIP19.49■□□□□ 0.71
HDAC4-211ENST00000494800 ARF4P18085 180 aaPredicted RBP19.49■□□□□ 0.71
HDAC4-211ENST00000494800 PLCB3Q01970 1234 aa19.49■□□□□ 0.71
HDAC4-211ENST00000494800 TFF2Q03403 129 aa19.49■□□□□ 0.71
HDAC4-211ENST00000494800 PRPF4BQ13523 1007 aaKnown RBP19.49■□□□□ 0.71
HDAC4-211ENST00000494800 BMS1Q14692 1282 aaKnown RBP19.49■□□□□ 0.71
HDAC4-211ENST00000494800 AMHR2Q16671 573 aa19.49■□□□□ 0.71
HDAC4-211ENST00000494800 UBXN11Q5T124 520 aa19.49■□□□□ 0.71
HDAC4-211ENST00000494800 PPP4R3CPQ6ZMV5 832 aa19.49■□□□□ 0.71
HDAC4-211ENST00000494800 FAM193BQ96PV7 902 aaPredicted RBP19.49■□□□□ 0.71
HDAC4-211ENST00000494800 TLR9Q9NR96 1032 aa19.49■□□□□ 0.71
HDAC4-211ENST00000494800 KCND2Q9NZV8 630 aa19.49■□□□□ 0.71
HDAC4-211ENST00000494800 HCSTQ9UBK5 93 aa19.49■□□□□ 0.71
HDAC4-211ENST00000494800 IPPQ9Y573 584 aa19.49■□□□□ 0.71
HDAC4-211ENST00000494800 FSD2A1L4K1 749 aa19.48■□□□□ 0.71
HDAC4-211ENST00000494800 ZC3H11AO75152 810 aaKnown RBP eCLIP19.48■□□□□ 0.71
HDAC4-211ENST00000494800 RESTQ13127 1097 aa19.48■□□□□ 0.71
HDAC4-211ENST00000494800 DMP1Q13316 513 aaPredicted RBP19.48■□□□□ 0.71
HDAC4-211ENST00000494800 FAM187BQ17R55 369 aa19.48■□□□□ 0.71
HDAC4-211ENST00000494800 EP400NLQ6ZTU2 488 aa19.48■□□□□ 0.71
HDAC4-211ENST00000494800 APBB1IPQ7Z5R6 666 aaPredicted RBP19.48■□□□□ 0.71
HDAC4-211ENST00000494800 MRPS27Q92552 414 aaKnown RBP19.48■□□□□ 0.71
HDAC4-211ENST00000494800 PABPC5Q96DU9 382 aaKnown RBP19.48■□□□□ 0.71
HDAC4-211ENST00000494800 ADPGKQ9BRR6 497 aa19.48■□□□□ 0.71
HDAC4-211ENST00000494800 COL25A1Q9BXS0 654 aaPredicted RBP19.48■□□□□ 0.71
HDAC4-211ENST00000494800 FZD8Q9H461 694 aa19.48■□□□□ 0.71
HDAC4-211ENST00000494800 C17orf75Q9HAS0 396 aa19.48■□□□□ 0.71
HDAC4-211ENST00000494800 TBC1D13Q9NVG8 400 aa19.48■□□□□ 0.71
HDAC4-211ENST00000494800 A0A1B0GUA9 196 aa19.47■□□□□ 0.71
HDAC4-211ENST00000494800 CCDC169A6NNP5 214 aa19.47■□□□□ 0.71
HDAC4-211ENST00000494800 N4BP3O15049 544 aa19.47■□□□□ 0.71
HDAC4-211ENST00000494800 B4GALT5O43286 388 aa19.47■□□□□ 0.71
HDAC4-211ENST00000494800 PRKCBP05771 671 aa19.47■□□□□ 0.71
HDAC4-211ENST00000494800 LIG1P18858 919 aa19.47■□□□□ 0.71
HDAC4-211ENST00000494800 DNAJB1P25685 340 aa19.47■□□□□ 0.71
HDAC4-211ENST00000494800 BCAR1P56945 870 aa19.47■□□□□ 0.71
HDAC4-211ENST00000494800 RINT1Q6NUQ1 792 aa19.47■□□□□ 0.71
HDAC4-211ENST00000494800 AGMOQ6ZNB7 445 aa19.47■□□□□ 0.71
HDAC4-211ENST00000494800 BSNDQ8WZ55 320 aa19.47■□□□□ 0.71
HDAC4-211ENST00000494800 TMEM169Q96HH4 297 aa19.47■□□□□ 0.71
HDAC4-211ENST00000494800 PLIN2Q99541 437 aa19.47■□□□□ 0.71
HDAC4-211ENST00000494800 EIF2AQ9BY44 585 aaKnown RBP19.47■□□□□ 0.71
HDAC4-211ENST00000494800 MTMR6Q9Y217 621 aa19.47■□□□□ 0.71
HDAC4-211ENST00000494800 KIAA1671Q9BY89 1806 aa19.46■□□□□ 0.71
HDAC4-211ENST00000494800 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.46■□□□□ 0.71
HDAC4-211ENST00000494800 MEIS3P2A8K0S8 358 aa19.46■□□□□ 0.71
HDAC4-211ENST00000494800 ACKR2O00590 384 aa19.46■□□□□ 0.71
HDAC4-211ENST00000494800 HIP1RO75146 1068 aa19.46■□□□□ 0.71
HDAC4-211ENST00000494800 KCNA5P22460 613 aa19.46■□□□□ 0.71
HDAC4-211ENST00000494800 GUCY2CP25092 1073 aa19.46■□□□□ 0.71
HDAC4-211ENST00000494800 TXLNAP40222 546 aa19.46■□□□□ 0.71
HDAC4-211ENST00000494800 CAMK1Q14012 370 aa19.46■□□□□ 0.71
HDAC4-211ENST00000494800 PUS10Q3MIT2 529 aaKnown RBP19.46■□□□□ 0.71
HDAC4-211ENST00000494800 C1orf186Q6ZWK4 172 aa19.46■□□□□ 0.71
HDAC4-211ENST00000494800 SYT2Q8N9I0 419 aaPredicted RBP19.46■□□□□ 0.71
HDAC4-211ENST00000494800 SMG8Q8ND04 991 aaKnown RBP19.46■□□□□ 0.71
HDAC4-211ENST00000494800 PNMA5Q96PV4 448 aa19.46■□□□□ 0.71
HDAC4-211ENST00000494800 RUSC1Q9BVN2 902 aa19.46■□□□□ 0.71
HDAC4-211ENST00000494800 GBP3Q9H0R5 595 aa19.46■□□□□ 0.71
HDAC4-211ENST00000494800 NGRNQ9NPE2 291 aaKnown RBP19.46■□□□□ 0.71
HDAC4-211ENST00000494800 ENTPD7Q9NQZ7 604 aa19.46■□□□□ 0.71
HDAC4-211ENST00000494800 CLDND1Q9NY35 253 aa19.46■□□□□ 0.71
HDAC4-211ENST00000494800 STK39Q9UEW8 545 aa19.46■□□□□ 0.71
HDAC4-211ENST00000494800 GIT1Q9Y2X7 761 aa19.46■□□□□ 0.71
HDAC4-211ENST00000494800 CLIC4Q9Y696 253 aa19.46■□□□□ 0.71
HDAC4-211ENST00000494800 A0A0C4DFX4 3053 aa19.45■□□□□ 0.7
HDAC4-211ENST00000494800 K7ERI5 159 aa19.45■□□□□ 0.7
HDAC4-211ENST00000494800 NR1I2O75469 434 aa19.45■□□□□ 0.7
HDAC4-211ENST00000494800 NPTXRO95502 500 aa19.45■□□□□ 0.7
HDAC4-211ENST00000494800 PLA2G4BP0C869 781 aa19.45■□□□□ 0.7
HDAC4-211ENST00000494800 PBX3P40426 434 aa19.45■□□□□ 0.7
HDAC4-211ENST00000494800 PEX3P56589 373 aa19.45■□□□□ 0.7
HDAC4-211ENST00000494800 TMEM119Q4V9L6 283 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms