RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 LONRF1Q17RB8 773 aa16.54■□□□□ 0.24
SDF4-207ENST00000494748 C15orf52Q6ZUT6 534 aaKnown RBP16.54■□□□□ 0.24
SDF4-207ENST00000494748 CROCCP2Q86T23 111 aa16.54■□□□□ 0.24
SDF4-207ENST00000494748 SLC20A1Q8WUM9 679 aa16.54■□□□□ 0.24
SDF4-207ENST00000494748 FAM163AQ96GL9 167 aaPredicted RBP16.54■□□□□ 0.24
SDF4-207ENST00000494748 ANO3Q9BYT9 981 aa16.54■□□□□ 0.24
SDF4-207ENST00000494748 ARHGEF10LQ9HCE6 1279 aa16.54■□□□□ 0.24
SDF4-207ENST00000494748 TMEM120BA0PK00 339 aa16.54■□□□□ 0.24
SDF4-207ENST00000494748 GH1P01241 217 aa16.54■□□□□ 0.24
SDF4-207ENST00000494748 RPL13P26373 211 aaKnown RBP16.54■□□□□ 0.24
SDF4-207ENST00000494748 CLUL1Q15846 466 aa16.54■□□□□ 0.24
SDF4-207ENST00000494748 QSER1Q2KHR3 1735 aa16.54■□□□□ 0.24
SDF4-207ENST00000494748 PHLDB3Q6NSJ2 640 aa16.54■□□□□ 0.24
SDF4-207ENST00000494748 DPP8Q6V1X1 898 aaPredicted RBP16.54■□□□□ 0.24
SDF4-207ENST00000494748 FIZ1Q96SL8 496 aa16.54■□□□□ 0.24
SDF4-207ENST00000494748 NAP1L4Q99733 375 aaKnown RBP16.54■□□□□ 0.24
SDF4-207ENST00000494748 NYXQ9GZU5 481 aa16.54■□□□□ 0.24
SDF4-207ENST00000494748 OLFML3Q9NRN5 406 aa16.54■□□□□ 0.24
SDF4-207ENST00000494748 SMCHD1A6NHR9 2005 aa16.54■□□□□ 0.24
SDF4-207ENST00000494748 MEIS2O14770 477 aa16.54■□□□□ 0.24
SDF4-207ENST00000494748 GBP1P32455 592 aa16.54■□□□□ 0.24
SDF4-207ENST00000494748 RHBDF2Q6PJF5 856 aa16.54■□□□□ 0.24
SDF4-207ENST00000494748 CKAP2Q8WWK9 683 aa16.54■□□□□ 0.24
SDF4-207ENST00000494748 ROPN1BQ9BZX4 212 aaPredicted RBP16.54■□□□□ 0.24
SDF4-207ENST00000494748 ROPN1Q9HAT0 212 aaPredicted RBP16.54■□□□□ 0.24
SDF4-207ENST00000494748 O00370 1275 aa16.53■□□□□ 0.24
SDF4-207ENST00000494748 GCNT3O95395 438 aa16.53■□□□□ 0.24
SDF4-207ENST00000494748 PYGMP11217 842 aa16.53■□□□□ 0.24
SDF4-207ENST00000494748 RRP1BQ14684 758 aaKnown RBP16.53■□□□□ 0.24
SDF4-207ENST00000494748 SLMAPQ14BN4 828 aa16.53■□□□□ 0.24
SDF4-207ENST00000494748 MIS18BP1Q6P0N0 1132 aa16.53■□□□□ 0.24
SDF4-207ENST00000494748 MOXD1Q6UVY6 613 aa16.53■□□□□ 0.24
SDF4-207ENST00000494748 FAM186BQ8IYM0 893 aa16.53■□□□□ 0.24
SDF4-207ENST00000494748 SLFN12Q8IYM2 578 aa16.53■□□□□ 0.24
SDF4-207ENST00000494748 POP1Q99575 1024 aaKnown RBP16.53■□□□□ 0.24
SDF4-207ENST00000494748 INTS2Q9H0H0 1204 aaKnown RBP16.53■□□□□ 0.24
SDF4-207ENST00000494748 CDC42EP4Q9H3Q1 356 aaKnown RBP16.53■□□□□ 0.24
SDF4-207ENST00000494748 CTNNAL1Q9UBT7 734 aa16.53■□□□□ 0.24
SDF4-207ENST00000494748 VAV3Q9UKW4 847 aa16.53■□□□□ 0.24
SDF4-207ENST00000494748 SPATA31A5Q5VU36 1347 aa16.53■□□□□ 0.24
SDF4-207ENST00000494748 SPATA31A6Q5VVP1 1343 aa16.53■□□□□ 0.24
SDF4-207ENST00000494748 SPATA31A7Q8IWB4 1347 aa16.53■□□□□ 0.24
SDF4-207ENST00000494748 HSPA6P17066 643 aa16.53■□□□□ 0.24
SDF4-207ENST00000494748 COILP38432 576 aaPredicted RBP16.53■□□□□ 0.24
SDF4-207ENST00000494748 MSH2P43246 934 aa16.53■□□□□ 0.24
SDF4-207ENST00000494748 INHBEP58166 350 aa16.53■□□□□ 0.24
SDF4-207ENST00000494748 KCTD1Q719H9 257 aa16.53■□□□□ 0.24
SDF4-207ENST00000494748 OTUD6AQ7L8S5 288 aa16.53■□□□□ 0.24
SDF4-207ENST00000494748 NBPF5PQ86XG9 351 aaPredicted RBP16.53■□□□□ 0.24
SDF4-207ENST00000494748 RXFP1Q9HBX9 757 aa16.53■□□□□ 0.24
SDF4-207ENST00000494748 PARP2Q9UGN5 583 aa16.53■□□□□ 0.24
SDF4-207ENST00000494748 DNM3Q9UQ16 869 aa16.53■□□□□ 0.24
SDF4-207ENST00000494748 THRAP3Q9Y2W1 955 aaKnown RBP16.53■□□□□ 0.24
SDF4-207ENST00000494748 TAOK1Q7L7X3 1001 aa16.53■□□□□ 0.24
SDF4-207ENST00000494748 ZNF483Q8TF39 744 aaPredicted RBP16.53■□□□□ 0.24
SDF4-207ENST00000494748 ANKIB1Q9P2G1 1089 aa16.53■□□□□ 0.24
SDF4-207ENST00000494748 APEX2Q9UBZ4 518 aa16.53■□□□□ 0.24
SDF4-207ENST00000494748 MTRF1LQ9UGC7 380 aaKnown RBP16.53■□□□□ 0.24
SDF4-207ENST00000494748 MIF4GDA9UHW6 222 aaKnown RBP16.52■□□□□ 0.24
SDF4-207ENST00000494748 FOXN3O00409 490 aaPredicted RBP16.52■□□□□ 0.24
SDF4-207ENST00000494748 TTLL1O95922 423 aa16.52■□□□□ 0.24
SDF4-207ENST00000494748 DDB1Q16531 1140 aa16.52■□□□□ 0.24
SDF4-207ENST00000494748 ZC2HC1CQ53FD0 456 aaPredicted RBP16.52■□□□□ 0.24
SDF4-207ENST00000494748 LRCH2Q5VUJ6 765 aa16.52■□□□□ 0.24
SDF4-207ENST00000494748 CYFIP1Q7L576 1253 aa16.52■□□□□ 0.24
SDF4-207ENST00000494748 C12orf50Q8NA57 414 aaPredicted RBP16.52■□□□□ 0.24
SDF4-207ENST00000494748 MGARPQ8TDB4 240 aa16.52■□□□□ 0.24
SDF4-207ENST00000494748 KLHL29Q96CT2 875 aa16.52■□□□□ 0.24
SDF4-207ENST00000494748 STMN4Q9H169 189 aaPredicted RBP16.52■□□□□ 0.24
SDF4-207ENST00000494748 DMAC2Q9NW81 257 aa16.52■□□□□ 0.24
SDF4-207ENST00000494748 LTBP1Q14766 1721 aa16.52■□□□□ 0.24
SDF4-207ENST00000494748 SFI1A8K8P3 1242 aa16.52■□□□□ 0.23
SDF4-207ENST00000494748 FAM86B1E9PN63 330 aa16.52■□□□□ 0.23
SDF4-207ENST00000494748 FAM86B2P0C5J1 330 aa16.52■□□□□ 0.23
SDF4-207ENST00000494748 PSMC2P35998 433 aaKnown RBP16.52■□□□□ 0.23
SDF4-207ENST00000494748 Q4G0T1 1027 aa16.52■□□□□ 0.23
SDF4-207ENST00000494748 SPATA21Q7Z572 469 aa16.52■□□□□ 0.23
SDF4-207ENST00000494748 KSR1Q8IVT5 923 aa16.52■□□□□ 0.23
SDF4-207ENST00000494748 RHOT2Q8IXI1 618 aa16.52■□□□□ 0.23
SDF4-207ENST00000494748 AGPAT1Q99943 283 aa16.52■□□□□ 0.23
SDF4-207ENST00000494748 BHMT2Q9H2M3 363 aa16.52■□□□□ 0.23
SDF4-207ENST00000494748 ARL2BPQ9Y2Y0 163 aa16.52■□□□□ 0.23
SDF4-207ENST00000494748 SUN1O94901 812 aa16.52■□□□□ 0.23
SDF4-207ENST00000494748 GGPS1O95749 300 aa16.52■□□□□ 0.23
SDF4-207ENST00000494748 COMTP21964 271 aa16.52■□□□□ 0.23
SDF4-207ENST00000494748 NMT1P30419 496 aaKnown RBP16.52■□□□□ 0.23
SDF4-207ENST00000494748 ZNF804AQ7Z570 1209 aa16.52■□□□□ 0.23
SDF4-207ENST00000494748 GBP7Q8N8V2 638 aaPredicted RBP16.52■□□□□ 0.23
SDF4-207ENST00000494748 C7orf43Q8WVR3 580 aa16.52■□□□□ 0.23
SDF4-207ENST00000494748 ARHGEF2Q92974 986 aaKnown RBP16.52■□□□□ 0.23
SDF4-207ENST00000494748 SPDL1Q96EA4 605 aa16.52■□□□□ 0.23
SDF4-207ENST00000494748 CD209Q9NNX6 404 aa16.52■□□□□ 0.23
SDF4-207ENST00000494748 CHORDC1Q9UHD1 332 aaPredicted RBP16.52■□□□□ 0.23
SDF4-207ENST00000494748 EIF3DO15371 548 aaKnown RBP eCLIP16.51■□□□□ 0.23
SDF4-207ENST00000494748 TRIM49P0CI25 452 aa16.51■□□□□ 0.23
SDF4-207ENST00000494748 TRIM49CP0CI26 452 aa16.51■□□□□ 0.23
SDF4-207ENST00000494748 CHKAP35790 457 aa16.51■□□□□ 0.23
SDF4-207ENST00000494748 KCNJ1P48048 391 aa16.51■□□□□ 0.23
SDF4-207ENST00000494748 BLMHQ13867 455 aa16.51■□□□□ 0.23
SDF4-207ENST00000494748 SLC15A2Q16348 729 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms