RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 TCP11Q8WWU5 503 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 SLC7A3Q8WY07 619 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 IFT74Q96LB3 600 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 POLR3FQ9H1D9 316 aaPredicted RBP7.43□□□□□ -1.22
MSH5-217ENST00000494458 NUCKS1Q9H1E3 243 aaKnown RBP7.43□□□□□ -1.22
MSH5-217ENST00000494458 FZD8Q9H461 694 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 RNPEPQ9H4A4 650 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 GPBP1L1Q9HC44 474 aaPredicted RBP7.43□□□□□ -1.22
MSH5-217ENST00000494458 SIX2Q9NPC8 291 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 HSPBP1Q9NZL4 362 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 AIPL1Q9NZN9 384 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 FLRT1Q9NZU1 646 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 CEP72Q9P209 647 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 ADGRG1Q9Y653 693 aa7.43□□□□□ -1.22
MSH5-217ENST00000494458 MCM3APO60318 1980 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 A0A0B4J269 797 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 SSU72P8A0A1W2PR75 194 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 MBLAC1A4D2B0 266 aaPredicted RBP7.42□□□□□ -1.22
MSH5-217ENST00000494458 USP27XA6NNY8 438 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 RBAK-RBAKDNI3L0D1 243 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 NOP56O00567 594 aaKnown RBP7.42□□□□□ -1.22
MSH5-217ENST00000494458 MAGEB2O15479 319 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 CCP110O43303 1012 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 NRDCO43847 1150 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 FAM189A1O60320 539 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 MSCO60682 206 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 C22orf31O95567 290 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 MMP3P08254 477 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 TPM1P09493 284 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 PROZP22891 400 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 GTF2H1P32780 548 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 RGS2P41220 211 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 FMO5P49326 533 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 EFNA5P52803 228 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 POLGP54098 1239 aaPredicted RBP7.42□□□□□ -1.22
MSH5-217ENST00000494458 JAM2P57087 298 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 PTENP60484 403 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 SP4Q02446 784 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 BFSP1Q12934 665 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 NOGQ13253 232 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 CAPSQ13938 189 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 FAM187BQ17R55 369 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 MARCH8Q5T0T0 291 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 WDR78Q5VTH9 848 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 HGSNATQ68CP4 663 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 C15orf39Q6ZRI6 1047 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 MAEAQ7L5Y9 396 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 CCDC170Q8IYT3 715 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 C17orf53Q8N3J3 647 aaPredicted RBP7.42□□□□□ -1.22
MSH5-217ENST00000494458 CCDC155Q8N6L0 562 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 PLEKHO2Q8TD55 490 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 PARD3BQ8TEW8 1205 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 AFG1LQ8WV93 481 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 PRPF31Q8WWY3 499 aaKnown RBP7.42□□□□□ -1.22
MSH5-217ENST00000494458 PSPC1Q8WXF1 523 aaKnown RBP7.42□□□□□ -1.22
MSH5-217ENST00000494458 KAT2BQ92831 832 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 TMEM143Q96AN5 459 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 CCDC43Q96MW1 224 aaKnown RBP7.42□□□□□ -1.22
MSH5-217ENST00000494458 APBA2Q99767 749 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 CBWD1Q9BRT8 395 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 KIAA1586Q9HCI6 787 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 PTPRHQ9HD43 1115 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 FRMD4BQ9Y2L6 1034 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 PPP2R2CQ9Y2T4 447 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 EPN1Q9Y6I3 576 aaPredicted RBP7.42□□□□□ -1.22
MSH5-217ENST00000494458 SIP14410 1827 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 MYH11P35749 1972 aa7.42□□□□□ -1.22
MSH5-217ENST00000494458 DOCK3Q8IZD9 2030 aa7.41□□□□□ -1.22
MSH5-217ENST00000494458 GOLGA6L9A6NEM1 432 aa7.41□□□□□ -1.22
MSH5-217ENST00000494458 SOWAHDA6NJG2 315 aa7.41□□□□□ -1.22
MSH5-217ENST00000494458 CCDC169A6NNP5 214 aa7.41□□□□□ -1.22
MSH5-217ENST00000494458 EIF3CLB5ME19 914 aaKnown RBP7.41□□□□□ -1.22
MSH5-217ENST00000494458 TISP43B9A030 160 aa7.41□□□□□ -1.22
MSH5-217ENST00000494458 H3BRB1 525 aa7.41□□□□□ -1.22
MSH5-217ENST00000494458 K7ERI5 159 aa7.41□□□□□ -1.22
MSH5-217ENST00000494458 KIF2AO00139 706 aaPredicted RBP7.41□□□□□ -1.22
MSH5-217ENST00000494458 EXOC3O60645 756 aa7.41□□□□□ -1.22
MSH5-217ENST00000494458 F2P00734 622 aa7.41□□□□□ -1.22
MSH5-217ENST00000494458 EDN1P05305 212 aa7.41□□□□□ -1.22
MSH5-217ENST00000494458 ADRB2P07550 413 aa7.41□□□□□ -1.22
MSH5-217ENST00000494458 INSRRP14616 1297 aa7.41□□□□□ -1.22
MSH5-217ENST00000494458 UCHL3P15374 230 aa7.41□□□□□ -1.22
MSH5-217ENST00000494458 TRIM21P19474 475 aaKnown RBP7.41□□□□□ -1.22
MSH5-217ENST00000494458 ANXA13P27216 316 aa7.41□□□□□ -1.22
MSH5-217ENST00000494458 PRKCIP41743 596 aa7.41□□□□□ -1.22
MSH5-217ENST00000494458 TNFAIP2Q03169 654 aa7.41□□□□□ -1.22
MSH5-217ENST00000494458 LAMTOR4Q0VGL1 99 aa7.41□□□□□ -1.22
MSH5-217ENST00000494458 GRM1Q13255 1194 aa7.41□□□□□ -1.22
MSH5-217ENST00000494458 DRP2Q13474 957 aa7.41□□□□□ -1.22
MSH5-217ENST00000494458 HSP90AA2PQ14568 343 aaPredicted RBP7.41□□□□□ -1.22
MSH5-217ENST00000494458 DGKDQ16760 1214 aa7.41□□□□□ -1.22
MSH5-217ENST00000494458 EXOC3L4Q17RC7 722 aa7.41□□□□□ -1.22
MSH5-217ENST00000494458 EPC2Q52LR7 807 aa7.41□□□□□ -1.22
MSH5-217ENST00000494458 GJC2Q5T442 439 aaPredicted RBP7.41□□□□□ -1.22
MSH5-217ENST00000494458 SLFN12LQ6IEE8 588 aa7.41□□□□□ -1.22
MSH5-217ENST00000494458 PDXDC1Q6P996 788 aa7.41□□□□□ -1.22
MSH5-217ENST00000494458 CRELD2Q6UXH1 353 aaPredicted RBP7.41□□□□□ -1.22
MSH5-217ENST00000494458 GBP6Q6ZN66 633 aa7.41□□□□□ -1.22
MSH5-217ENST00000494458 TSHZ1Q6ZSZ6 1077 aa7.41□□□□□ -1.22
MSH5-217ENST00000494458 IRF2BP2Q7Z5L9 587 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms