RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 IGSF5Q9NSI5 407 aa3.12□□□□□ -1.91
PTPN12-212ENST00000494248 SEMA4GQ9NTN9 838 aa3.12□□□□□ -1.91
PTPN12-212ENST00000494248 TRPM5Q9NZQ8 1165 aa3.12□□□□□ -1.91
PTPN12-212ENST00000494248 EIF2B4Q9UI10 523 aaKnown RBP3.12□□□□□ -1.91
PTPN12-212ENST00000494248 TRBV23-1A0A0A0MS06 115 aa3.11□□□□□ -1.91
PTPN12-212ENST00000494248 LEFTY2O00292 366 aa3.11□□□□□ -1.91
PTPN12-212ENST00000494248 SCDO00767 359 aa3.11□□□□□ -1.91
PTPN12-212ENST00000494248 CLSTN1O94985 981 aa3.11□□□□□ -1.91
PTPN12-212ENST00000494248 ESRRBO95718 433 aa3.11□□□□□ -1.91
PTPN12-212ENST00000494248 GNAT2P19087 354 aa3.11□□□□□ -1.91
PTPN12-212ENST00000494248 SRSF4Q08170 494 aaKnown RBP3.11□□□□□ -1.91
PTPN12-212ENST00000494248 TP53BP2Q13625 1128 aa3.11□□□□□ -1.91
PTPN12-212ENST00000494248 CMTM4Q8IZR5 234 aa3.11□□□□□ -1.91
PTPN12-212ENST00000494248 CISD2Q8N5K1 135 aaKnown RBP3.11□□□□□ -1.91
PTPN12-212ENST00000494248 OR52N2Q8NGI0 321 aa3.11□□□□□ -1.91
PTPN12-212ENST00000494248 ARL8AQ96BM9 186 aa3.11□□□□□ -1.91
PTPN12-212ENST00000494248 PSMD1Q99460 953 aa3.11□□□□□ -1.91
PTPN12-212ENST00000494248 TRIM55Q9BYV6 548 aa3.11□□□□□ -1.91
PTPN12-212ENST00000494248 NCDNQ9UBB6 729 aa3.11□□□□□ -1.91
PTPN12-212ENST00000494248 PPP1R1BQ9UD71 204 aaPredicted RBP3.11□□□□□ -1.91
PTPN12-212ENST00000494248 MSRB2Q9Y3D2 182 aa3.11□□□□□ -1.91
PTPN12-212ENST00000494248 ARID4BQ4LE39 1312 aaPredicted RBP3.11□□□□□ -1.91
PTPN12-212ENST00000494248 WIPF3A6NGB9 483 aa3.1□□□□□ -1.91
PTPN12-212ENST00000494248 MTSS1O43312 755 aa3.1□□□□□ -1.91
PTPN12-212ENST00000494248 KRTAP5-8O75690 187 aa3.1□□□□□ -1.91
PTPN12-212ENST00000494248 CRTAMO95727 393 aa3.1□□□□□ -1.91
PTPN12-212ENST00000494248 PRLP01236 227 aa3.1□□□□□ -1.91
PTPN12-212ENST00000494248 JUNP05412 331 aaKnown RBP3.1□□□□□ -1.91
PTPN12-212ENST00000494248 NCLP19338 710 aaKnown RBP3.1□□□□□ -1.91
PTPN12-212ENST00000494248 FNTBP49356 437 aa3.1□□□□□ -1.91
PTPN12-212ENST00000494248 DNM2P50570 870 aa3.1□□□□□ -1.91
PTPN12-212ENST00000494248 PROK1P58294 105 aa3.1□□□□□ -1.91
PTPN12-212ENST00000494248 SIM1P81133 766 aaPredicted RBP3.1□□□□□ -1.91
PTPN12-212ENST00000494248 RAB33AQ14088 237 aa3.1□□□□□ -1.91
PTPN12-212ENST00000494248 DGKDQ16760 1214 aa3.1□□□□□ -1.91
PTPN12-212ENST00000494248 METTL24Q5JXM2 366 aa3.1□□□□□ -1.91
PTPN12-212ENST00000494248 ARHGEF25Q86VW2 580 aa3.1□□□□□ -1.91
PTPN12-212ENST00000494248 TICAM2Q86XR7 235 aa3.1□□□□□ -1.91
PTPN12-212ENST00000494248 CERS3Q8IU89 383 aa3.1□□□□□ -1.91
PTPN12-212ENST00000494248 CPEB3Q8NE35 698 aaKnown RBP3.1□□□□□ -1.91
PTPN12-212ENST00000494248 E2F7Q96AV8 911 aa3.1□□□□□ -1.91
PTPN12-212ENST00000494248 NDC1Q9BTX1 674 aa3.1□□□□□ -1.91
PTPN12-212ENST00000494248 LSM14BQ9BX40 385 aaKnown RBP3.1□□□□□ -1.91
PTPN12-212ENST00000494248 ENKD1Q9H0I2 346 aa3.1□□□□□ -1.91
PTPN12-212ENST00000494248 PCDHA9Q9Y5H5 950 aa3.1□□□□□ -1.91
PTPN12-212ENST00000494248 SLC12A8A0AV02 714 aa3.09□□□□□ -1.91
PTPN12-212ENST00000494248 UNCXA6NJT0 531 aa3.09□□□□□ -1.91
PTPN12-212ENST00000494248 RNASET2O00584 256 aaKnown RBP3.09□□□□□ -1.91
PTPN12-212ENST00000494248 HOXA3O43365 443 aaPredicted RBP3.09□□□□□ -1.91
PTPN12-212ENST00000494248 EGR2P11161 476 aaPredicted RBP3.09□□□□□ -1.91
PTPN12-212ENST00000494248 HNRNPLP14866 589 aaKnown RBP eCLIP3.09□□□□□ -1.91
PTPN12-212ENST00000494248 BMPR1AP36894 532 aa3.09□□□□□ -1.91
PTPN12-212ENST00000494248 VPS72Q15906 364 aa3.09□□□□□ -1.91
PTPN12-212ENST00000494248 KRT40Q6A162 431 aa3.09□□□□□ -1.91
PTPN12-212ENST00000494248 CC2D1AQ6P1N0 951 aaPredicted RBP3.09□□□□□ -1.91
PTPN12-212ENST00000494248 OVCH1Q7RTY7 1134 aa3.09□□□□□ -1.91
PTPN12-212ENST00000494248 GDF7Q7Z4P5 450 aa3.09□□□□□ -1.91
PTPN12-212ENST00000494248 ZBTB38Q8NAP3 1195 aaPredicted RBP3.09□□□□□ -1.91
PTPN12-212ENST00000494248 GSTCDQ8NEC7 633 aa3.09□□□□□ -1.91
PTPN12-212ENST00000494248 CAGE1Q8TC20 777 aa3.09□□□□□ -1.91
PTPN12-212ENST00000494248 GMLQ99445 158 aa3.09□□□□□ -1.91
PTPN12-212ENST00000494248 CPPED1Q9BRF8 314 aaPredicted RBP3.09□□□□□ -1.91
PTPN12-212ENST00000494248 PDCD2LQ9BRP1 358 aa3.09□□□□□ -1.91
PTPN12-212ENST00000494248 C14orf93Q9H972 538 aaKnown RBP3.09□□□□□ -1.91
PTPN12-212ENST00000494248 POLR3BQ9NW08 1133 aaPredicted RBP3.09□□□□□ -1.91
PTPN12-212ENST00000494248 KCMF1Q9P0J7 381 aa3.09□□□□□ -1.91
PTPN12-212ENST00000494248 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.09□□□□□ -1.91
PTPN12-212ENST00000494248 DAPK3O43293 454 aa3.08□□□□□ -1.92
PTPN12-212ENST00000494248 HIP1RO75146 1068 aa3.08□□□□□ -1.92
PTPN12-212ENST00000494248 NPTXRO95502 500 aa3.08□□□□□ -1.92
PTPN12-212ENST00000494248 ZSCAN20P17040 1043 aaPredicted RBP3.08□□□□□ -1.92
PTPN12-212ENST00000494248 RGS3P49796 1198 aa3.08□□□□□ -1.92
PTPN12-212ENST00000494248 NPEPPSP55786 919 aa3.08□□□□□ -1.92
PTPN12-212ENST00000494248 GUCY1B3Q02153 619 aa3.08□□□□□ -1.92
PTPN12-212ENST00000494248 ROM1Q03395 351 aa3.08□□□□□ -1.92
PTPN12-212ENST00000494248 OCA2Q04671 838 aa3.08□□□□□ -1.92
PTPN12-212ENST00000494248 SCAPQ12770 1279 aa3.08□□□□□ -1.92
PTPN12-212ENST00000494248 LONRF2Q1L5Z9 754 aa3.08□□□□□ -1.92
PTPN12-212ENST00000494248 FAM209AQ5JX71 171 aa3.08□□□□□ -1.92
PTPN12-212ENST00000494248 FOXB2Q5VYV0 432 aa3.08□□□□□ -1.92
PTPN12-212ENST00000494248 SPATC1Q76KD6 591 aa3.08□□□□□ -1.92
PTPN12-212ENST00000494248 OTOP1Q7RTM1 612 aa3.08□□□□□ -1.92
PTPN12-212ENST00000494248 BMP8AQ7Z5Y6 402 aa3.08□□□□□ -1.92
PTPN12-212ENST00000494248 SYT12Q8IV01 421 aa3.08□□□□□ -1.92
PTPN12-212ENST00000494248 ANKRD13AQ8IZ07 590 aa3.08□□□□□ -1.92
PTPN12-212ENST00000494248 SLC44A3Q8N4M1 653 aa3.08□□□□□ -1.92
PTPN12-212ENST00000494248 SLC43A3Q8NBI5 491 aa3.08□□□□□ -1.92
PTPN12-212ENST00000494248 SLC7A14Q8TBB6 771 aa3.08□□□□□ -1.92
PTPN12-212ENST00000494248 ERCC4Q92889 916 aaPredicted RBP3.08□□□□□ -1.92
PTPN12-212ENST00000494248 EXOC2Q96KP1 924 aa3.08□□□□□ -1.92
PTPN12-212ENST00000494248 MAGEB10Q96LZ2 347 aaPredicted RBP3.08□□□□□ -1.92
PTPN12-212ENST00000494248 WDR92Q96MX6 357 aa3.08□□□□□ -1.92
PTPN12-212ENST00000494248 DUSP26Q9BV47 211 aa3.08□□□□□ -1.92
PTPN12-212ENST00000494248 ADGRE3Q9BY15 652 aa3.08□□□□□ -1.92
PTPN12-212ENST00000494248 DNAI1Q9UI46 699 aa3.08□□□□□ -1.92
PTPN12-212ENST00000494248 COQ6Q9Y2Z9 468 aa3.08□□□□□ -1.92
PTPN12-212ENST00000494248 CADPSQ9ULU8 1353 aa3.08□□□□□ -1.92
PTPN12-212ENST00000494248 EFCAB14O75071 495 aa3.07□□□□□ -1.92
PTPN12-212ENST00000494248 SPDEFO95238 335 aa3.07□□□□□ -1.92
PTPN12-212ENST00000494248 ZBTB48P10074 688 aaPredicted RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms