RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 PLCB3Q01970 1234 aa14.02□□□□□ -0.17
HSPG2-212ENST00000493940 KCNC3Q14003 757 aa14.02□□□□□ -0.17
HSPG2-212ENST00000493940 KCNK18Q7Z418 384 aa14.02□□□□□ -0.17
HSPG2-212ENST00000493940 FAM178BQ8IXR5 827 aa14.02□□□□□ -0.17
HSPG2-212ENST00000493940 IGSF22Q8N9C0 903 aa14.02□□□□□ -0.17
HSPG2-212ENST00000493940 FEZF2Q8TBJ5 459 aa14.02□□□□□ -0.17
HSPG2-212ENST00000493940 MRPS27Q92552 414 aaKnown RBP14.02□□□□□ -0.17
HSPG2-212ENST00000493940 MSLNLQ96KJ4 702 aa14.02□□□□□ -0.17
HSPG2-212ENST00000493940 VN1R3Q9BXE9 311 aa14.02□□□□□ -0.17
HSPG2-212ENST00000493940 BACH2Q9BYV9 841 aa14.02□□□□□ -0.17
HSPG2-212ENST00000493940 CXCL16Q9H2A7 254 aa14.02□□□□□ -0.17
HSPG2-212ENST00000493940 C11orf16Q9NQ32 467 aa14.02□□□□□ -0.17
HSPG2-212ENST00000493940 INPP5FQ9Y2H2 1132 aa14.02□□□□□ -0.17
HSPG2-212ENST00000493940 CITO14578 2027 aa14.02□□□□□ -0.17
HSPG2-212ENST00000493940 MYH15Q9Y2K3 1946 aa14.02□□□□□ -0.17
HSPG2-212ENST00000493940 PI4K2BG5E9Z4 385 aa14.01□□□□□ -0.17
HSPG2-212ENST00000493940 ARF4P18085 180 aaPredicted RBP14.01□□□□□ -0.17
HSPG2-212ENST00000493940 ORC2Q13416 577 aaPredicted RBP14.01□□□□□ -0.17
HSPG2-212ENST00000493940 GNL2Q13823 731 aaKnown RBP14.01□□□□□ -0.17
HSPG2-212ENST00000493940 MXD4Q14582 209 aaPredicted RBP14.01□□□□□ -0.17
HSPG2-212ENST00000493940 PLPP4Q5VZY2 271 aa14.01□□□□□ -0.17
HSPG2-212ENST00000493940 MCTP1Q6DN14 999 aa14.01□□□□□ -0.17
HSPG2-212ENST00000493940 EXOC8Q8IYI6 725 aa14.01□□□□□ -0.17
HSPG2-212ENST00000493940 ABI1Q8IZP0 508 aa14.01□□□□□ -0.17
HSPG2-212ENST00000493940 LRRC43Q8N309 656 aa14.01□□□□□ -0.17
HSPG2-212ENST00000493940 AUTS2Q8WXX7 1259 aa14.01□□□□□ -0.17
HSPG2-212ENST00000493940 ZNF558Q96NG5 402 aa14.01□□□□□ -0.17
HSPG2-212ENST00000493940 NACC1Q96RE7 527 aa14.01□□□□□ -0.17
HSPG2-212ENST00000493940 TLR9Q9NR96 1032 aa14.01□□□□□ -0.17
HSPG2-212ENST00000493940 LRWD1Q9UFC0 647 aa14.01□□□□□ -0.17
HSPG2-212ENST00000493940 VWA8A3KMH1 1905 aa14.01□□□□□ -0.17
HSPG2-212ENST00000493940 E9PMD0 336 aa14□□□□□ -0.17
HSPG2-212ENST00000493940 F8W810 466 aa14□□□□□ -0.17
HSPG2-212ENST00000493940 INO80B-WBP1J3KQ70 363 aa14□□□□□ -0.17
HSPG2-212ENST00000493940 HOXA2O43364 376 aa14□□□□□ -0.17
HSPG2-212ENST00000493940 MBTPS2O43462 519 aa14□□□□□ -0.17
HSPG2-212ENST00000493940 GALTP07902 379 aa14□□□□□ -0.17
HSPG2-212ENST00000493940 CYP11B2P19099 503 aa14□□□□□ -0.17
HSPG2-212ENST00000493940 CCT6AP40227 531 aaKnown RBP14□□□□□ -0.17
HSPG2-212ENST00000493940 SLC11A1P49279 550 aa14□□□□□ -0.17
HSPG2-212ENST00000493940 UBE3AQ05086 875 aa14□□□□□ -0.17
HSPG2-212ENST00000493940 POU5F1BQ06416 359 aa14□□□□□ -0.17
HSPG2-212ENST00000493940 CUL4AQ13619 759 aa14□□□□□ -0.17
HSPG2-212ENST00000493940 PDIA5Q14554 519 aa14□□□□□ -0.17
HSPG2-212ENST00000493940 NOMO2Q5JPE7 1267 aa14□□□□□ -0.17
HSPG2-212ENST00000493940 PADI6Q6TGC4 694 aa14□□□□□ -0.17
HSPG2-212ENST00000493940 EFHBQ8N7U6 833 aa14□□□□□ -0.17
HSPG2-212ENST00000493940 MICAL1Q8TDZ2 1067 aa14□□□□□ -0.17
HSPG2-212ENST00000493940 LRRC15Q8TF66 581 aa14□□□□□ -0.17
HSPG2-212ENST00000493940 GBP3Q9H0R5 595 aa14□□□□□ -0.17
HSPG2-212ENST00000493940 AAASQ9NRG9 546 aa14□□□□□ -0.17
HSPG2-212ENST00000493940 RNF216Q9NWF9 866 aaPredicted RBP14□□□□□ -0.17
HSPG2-212ENST00000493940 SPG21Q9NZD8 308 aa14□□□□□ -0.17
HSPG2-212ENST00000493940 BARX2Q9UMQ3 279 aaPredicted RBP14□□□□□ -0.17
HSPG2-212ENST00000493940 NOL7Q9UMY1 257 aaKnown RBP14□□□□□ -0.17
HSPG2-212ENST00000493940 KIAA1024Q9UPX6 916 aa14□□□□□ -0.17
HSPG2-212ENST00000493940 IPPQ9Y573 584 aa14□□□□□ -0.17
HSPG2-212ENST00000493940 PDCD11Q14690 1871 aaKnown RBP13.99□□□□□ -0.17
HSPG2-212ENST00000493940 ZC3H11AO75152 810 aaKnown RBP eCLIP13.99□□□□□ -0.17
HSPG2-212ENST00000493940 POMCP01189 267 aa13.99□□□□□ -0.17
HSPG2-212ENST00000493940 NCLP19338 710 aaKnown RBP13.99□□□□□ -0.17
HSPG2-212ENST00000493940 GRIN1Q05586 938 aa13.99□□□□□ -0.17
HSPG2-212ENST00000493940 DUSP6Q16828 381 aa13.99□□□□□ -0.17
HSPG2-212ENST00000493940 DAW1Q8N136 415 aa13.99□□□□□ -0.17
HSPG2-212ENST00000493940 GSTCDQ8NEC7 633 aa13.99□□□□□ -0.17
HSPG2-212ENST00000493940 ZFP42Q96MM3 310 aa13.99□□□□□ -0.17
HSPG2-212ENST00000493940 PNMA5Q96PV4 448 aa13.99□□□□□ -0.17
HSPG2-212ENST00000493940 TCF25Q9BQ70 676 aa13.99□□□□□ -0.17
HSPG2-212ENST00000493940 KIFC3Q9BVG8 833 aa13.99□□□□□ -0.17
HSPG2-212ENST00000493940 NFKBIZQ9BYH8 718 aa13.99□□□□□ -0.17
HSPG2-212ENST00000493940 CSRNP2Q9H175 543 aa13.99□□□□□ -0.17
HSPG2-212ENST00000493940 BHMT2Q9H2M3 363 aa13.99□□□□□ -0.17
HSPG2-212ENST00000493940 FZD8Q9H461 694 aa13.99□□□□□ -0.17
HSPG2-212ENST00000493940 TLE6Q9H808 572 aa13.99□□□□□ -0.17
HSPG2-212ENST00000493940 DDX19AQ9NUU7 478 aaKnown RBP13.99□□□□□ -0.17
HSPG2-212ENST00000493940 CACNG4Q9UBN1 327 aa13.99□□□□□ -0.17
HSPG2-212ENST00000493940 CDH22Q9UJ99 828 aa13.99□□□□□ -0.17
HSPG2-212ENST00000493940 LZTS1Q9Y250 596 aa13.99□□□□□ -0.17
HSPG2-212ENST00000493940 LRRIQ4A6NIV6 560 aa13.98□□□□□ -0.17
HSPG2-212ENST00000493940 AKAP5P24588 427 aa13.98□□□□□ -0.17
HSPG2-212ENST00000493940 RAB27AP51159 221 aa13.98□□□□□ -0.17
HSPG2-212ENST00000493940 ATP2C1P98194 919 aaPredicted RBP13.98□□□□□ -0.17
HSPG2-212ENST00000493940 CDCA2Q69YH5 1023 aaPredicted RBP13.98□□□□□ -0.17
HSPG2-212ENST00000493940 TAS1R1Q7RTX1 841 aa13.98□□□□□ -0.17
HSPG2-212ENST00000493940 SNX29Q8TEQ0 813 aa13.98□□□□□ -0.17
HSPG2-212ENST00000493940 IGSF21Q96ID5 467 aa13.98□□□□□ -0.17
HSPG2-212ENST00000493940 GAD1Q99259 594 aa13.98□□□□□ -0.17
HSPG2-212ENST00000493940 PLIN2Q99541 437 aa13.98□□□□□ -0.17
HSPG2-212ENST00000493940 APOL6Q9BWW8 343 aa13.98□□□□□ -0.17
HSPG2-212ENST00000493940 CCDC113Q9H0I3 377 aa13.98□□□□□ -0.17
HSPG2-212ENST00000493940 NXF3Q9H4D5 531 aaKnown RBP13.98□□□□□ -0.17
HSPG2-212ENST00000493940 RSAD1Q9HA92 442 aa13.98□□□□□ -0.17
HSPG2-212ENST00000493940 UPF2Q9HAU5 1272 aaKnown RBP13.98□□□□□ -0.17
HSPG2-212ENST00000493940 SMC3Q9UQE7 1217 aa13.98□□□□□ -0.17
HSPG2-212ENST00000493940 ANK1P16157 1881 aa13.97□□□□□ -0.17
HSPG2-212ENST00000493940 A0A1B0GUA9 196 aa13.97□□□□□ -0.17
HSPG2-212ENST00000493940 ARHGEF35A5YM69 484 aa13.97□□□□□ -0.17
HSPG2-212ENST00000493940 C2orf71A6NGG8 1288 aa13.97□□□□□ -0.17
HSPG2-212ENST00000493940 C19orf67A6NJJ6 358 aa13.97□□□□□ -0.17
HSPG2-212ENST00000493940 ERLIN2O94905 339 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms