RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 HERC4Q5GLZ8 1057 aaPredicted RBP26.35■■□□□ 1.81
RHBDD3-206ENST00000493894 UBXN11Q5T124 520 aa26.35■■□□□ 1.81
RHBDD3-206ENST00000493894 MRPL10Q7Z7H8 261 aaKnown RBP26.35■■□□□ 1.81
RHBDD3-206ENST00000493894 TMEM173Q86WV6 379 aaPredicted RBP26.35■■□□□ 1.81
RHBDD3-206ENST00000493894 SUSD6Q92537 303 aa26.35■■□□□ 1.81
RHBDD3-206ENST00000493894 CASP10Q92851 521 aa26.35■■□□□ 1.81
RHBDD3-206ENST00000493894 IGSF21Q96ID5 467 aa26.35■■□□□ 1.81
RHBDD3-206ENST00000493894 TMEM60Q9H2L4 133 aa26.35■■□□□ 1.81
RHBDD3-206ENST00000493894 LOC730098B7Z3J9 87 aa26.34■■□□□ 1.81
RHBDD3-206ENST00000493894 INO80B-WBP1J3KQ70 363 aa26.34■■□□□ 1.81
RHBDD3-206ENST00000493894 TSPAN1O60635 241 aa26.34■■□□□ 1.81
RHBDD3-206ENST00000493894 HOXB8P17481 243 aaPredicted RBP26.34■■□□□ 1.81
RHBDD3-206ENST00000493894 AXLP30530 894 aa26.34■■□□□ 1.81
RHBDD3-206ENST00000493894 RARRES1P49788 294 aa26.34■■□□□ 1.81
RHBDD3-206ENST00000493894 NOTUMQ6P988 496 aa26.34■■□□□ 1.81
RHBDD3-206ENST00000493894 AGMOQ6ZNB7 445 aa26.34■■□□□ 1.81
RHBDD3-206ENST00000493894 VPS52Q8N1B4 723 aa26.34■■□□□ 1.81
RHBDD3-206ENST00000493894 CNNM3Q8NE01 707 aa26.34■■□□□ 1.81
RHBDD3-206ENST00000493894 FAM122AQ96E09 287 aa26.34■■□□□ 1.81
RHBDD3-206ENST00000493894 ZBP1Q9H171 429 aa26.34■■□□□ 1.81
RHBDD3-206ENST00000493894 ARIH1Q9Y4X5 557 aaPredicted RBP26.34■■□□□ 1.81
RHBDD3-206ENST00000493894 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.33■■□□□ 1.81
RHBDD3-206ENST00000493894 GALTP07902 379 aa26.33■■□□□ 1.81
RHBDD3-206ENST00000493894 NCLP19338 710 aaKnown RBP26.33■■□□□ 1.81
RHBDD3-206ENST00000493894 SLC11A1P49279 550 aa26.33■■□□□ 1.81
RHBDD3-206ENST00000493894 HMGN5P82970 282 aaKnown RBP26.33■■□□□ 1.81
RHBDD3-206ENST00000493894 POU5F1BQ06416 359 aa26.33■■□□□ 1.81
RHBDD3-206ENST00000493894 NCBP1Q09161 790 aaKnown RBP26.33■■□□□ 1.81
RHBDD3-206ENST00000493894 CAPSQ13938 189 aa26.33■■□□□ 1.81
RHBDD3-206ENST00000493894 CBX2Q14781 532 aaPredicted RBP26.33■■□□□ 1.81
RHBDD3-206ENST00000493894 DDX53Q86TM3 631 aaKnown RBP26.33■■□□□ 1.81
RHBDD3-206ENST00000493894 IFNLR1Q8IU57 520 aaPredicted RBP26.33■■□□□ 1.81
RHBDD3-206ENST00000493894 ASAP3Q8TDY4 903 aa26.33■■□□□ 1.81
RHBDD3-206ENST00000493894 PIGOQ8TEQ8 1089 aa26.33■■□□□ 1.81
RHBDD3-206ENST00000493894 CCDC51Q96ER9 411 aa26.33■■□□□ 1.81
RHBDD3-206ENST00000493894 ZSCAN31Q96LW9 406 aaPredicted RBP26.33■■□□□ 1.81
RHBDD3-206ENST00000493894 KANSL3Q9P2N6 904 aa26.33■■□□□ 1.81
RHBDD3-206ENST00000493894 DNAJB4Q9UDY4 337 aa26.33■■□□□ 1.81
RHBDD3-206ENST00000493894 HCFC2Q9Y5Z7 792 aa26.33■■□□□ 1.81
RHBDD3-206ENST00000493894 USO1O60763 962 aaKnown RBP26.32■■□□□ 1.8
RHBDD3-206ENST00000493894 ORC2Q13416 577 aaPredicted RBP26.32■■□□□ 1.8
RHBDD3-206ENST00000493894 GIT2Q14161 759 aa26.32■■□□□ 1.8
RHBDD3-206ENST00000493894 TPRNQ4KMQ1 711 aa26.32■■□□□ 1.8
RHBDD3-206ENST00000493894 SYCE2Q6PIF2 218 aa26.32■■□□□ 1.8
RHBDD3-206ENST00000493894 TMEM87AQ8NBN3 555 aa26.32■■□□□ 1.8
RHBDD3-206ENST00000493894 BCL7CQ8WUZ0 217 aaPredicted RBP26.32■■□□□ 1.8
RHBDD3-206ENST00000493894 RPGRIP1Q96KN7 1286 aa26.32■■□□□ 1.8
RHBDD3-206ENST00000493894 FAM193BQ96PV7 902 aaPredicted RBP26.32■■□□□ 1.8
RHBDD3-206ENST00000493894 S1PR5Q9H228 398 aa26.32■■□□□ 1.8
RHBDD3-206ENST00000493894 FOXP1Q9H334 677 aaPredicted RBP26.32■■□□□ 1.8
RHBDD3-206ENST00000493894 UBN1Q9NPG3 1134 aa26.32■■□□□ 1.8
RHBDD3-206ENST00000493894 SH2B1Q9NRF2 756 aaPredicted RBP26.32■■□□□ 1.8
RHBDD3-206ENST00000493894 CXCL14O95715 111 aa26.31■■□□□ 1.8
RHBDD3-206ENST00000493894 CTSAP10619 480 aa26.31■■□□□ 1.8
RHBDD3-206ENST00000493894 XRCC6P12956 609 aaKnown RBP eCLIP26.31■■□□□ 1.8
RHBDD3-206ENST00000493894 ITGA4P13612 1032 aa26.31■■□□□ 1.8
RHBDD3-206ENST00000493894 ARL2P36404 184 aa26.31■■□□□ 1.8
RHBDD3-206ENST00000493894 MBTD1Q05BQ5 628 aa26.31■■□□□ 1.8
RHBDD3-206ENST00000493894 GNL2Q13823 731 aaKnown RBP26.31■■□□□ 1.8
RHBDD3-206ENST00000493894 ZNF280BQ86YH2 543 aa26.31■■□□□ 1.8
RHBDD3-206ENST00000493894 FAM184AQ8NB25 1140 aa26.31■■□□□ 1.8
RHBDD3-206ENST00000493894 APOL5Q9BWW9 433 aa26.31■■□□□ 1.8
RHBDD3-206ENST00000493894 NFKBIZQ9BYH8 718 aa26.31■■□□□ 1.8
RHBDD3-206ENST00000493894 POLR3FQ9H1D9 316 aaPredicted RBP26.31■■□□□ 1.8
RHBDD3-206ENST00000493894 TUFT1Q9NNX1 390 aa26.31■■□□□ 1.8
RHBDD3-206ENST00000493894 STK39Q9UEW8 545 aa26.31■■□□□ 1.8
RHBDD3-206ENST00000493894 CLASP2O75122 1294 aaKnown RBP26.3■■□□□ 1.8
RHBDD3-206ENST00000493894 OR52Z1P0C646 297 aa26.3■■□□□ 1.8
RHBDD3-206ENST00000493894 GLRA2P23416 452 aa26.3■■□□□ 1.8
RHBDD3-206ENST00000493894 SMG8Q8ND04 991 aaKnown RBP26.3■■□□□ 1.8
RHBDD3-206ENST00000493894 ERMNQ8TAM6 284 aa26.3■■□□□ 1.8
RHBDD3-206ENST00000493894 TMEM175Q9BSA9 504 aa26.3■■□□□ 1.8
RHBDD3-206ENST00000493894 IPPQ9Y573 584 aa26.3■■□□□ 1.8
RHBDD3-206ENST00000493894 IRAK3Q9Y616 596 aa26.3■■□□□ 1.8
RHBDD3-206ENST00000493894 B4GALT3O60512 393 aa26.29■■□□□ 1.8
RHBDD3-206ENST00000493894 DDHD2O94830 711 aa26.29■■□□□ 1.8
RHBDD3-206ENST00000493894 POMCP01189 267 aa26.29■■□□□ 1.8
RHBDD3-206ENST00000493894 SPATA31C1P0DKV0 1188 aa26.29■■□□□ 1.8
RHBDD3-206ENST00000493894 CATSPER3Q86XQ3 398 aa26.29■■□□□ 1.8
RHBDD3-206ENST00000493894 FBXO18Q8NFZ0 1043 aa26.29■■□□□ 1.8
RHBDD3-206ENST00000493894 AUTS2Q8WXX7 1259 aa26.29■■□□□ 1.8
RHBDD3-206ENST00000493894 CPB2Q96IY4 423 aa26.29■■□□□ 1.8
RHBDD3-206ENST00000493894 EIF2AQ9BY44 585 aaKnown RBP26.29■■□□□ 1.8
RHBDD3-206ENST00000493894 TRIM6Q9C030 488 aaPredicted RBP26.29■■□□□ 1.8
RHBDD3-206ENST00000493894 CSRNP2Q9H175 543 aa26.29■■□□□ 1.8
RHBDD3-206ENST00000493894 RBM25P49756 843 aaKnown RBP26.28■■□□□ 1.8
RHBDD3-206ENST00000493894 AFF1P51825 1210 aaKnown RBP26.28■■□□□ 1.8
RHBDD3-206ENST00000493894 TTC38Q5R3I4 469 aa26.28■■□□□ 1.8
RHBDD3-206ENST00000493894 CES5AQ6NT32 575 aa26.28■■□□□ 1.8
RHBDD3-206ENST00000493894 NOSTRINQ8IVI9 506 aa26.28■■□□□ 1.8
RHBDD3-206ENST00000493894 HACE1Q8IYU2 909 aa26.28■■□□□ 1.8
RHBDD3-206ENST00000493894 MCPH1Q8NEM0 835 aa26.28■■□□□ 1.8
RHBDD3-206ENST00000493894 POLR3CQ9BUI4 534 aaPredicted RBP26.28■■□□□ 1.8
RHBDD3-206ENST00000493894 DBR1Q9UK59 544 aaKnown RBP26.28■■□□□ 1.8
RHBDD3-206ENST00000493894 A0A087WWV3 80 aa26.27■■□□□ 1.8
RHBDD3-206ENST00000493894 MED24O75448 989 aa26.27■■□□□ 1.8
RHBDD3-206ENST00000493894 ARF4P18085 180 aaPredicted RBP26.27■■□□□ 1.8
RHBDD3-206ENST00000493894 ITIH3Q06033 890 aa26.27■■□□□ 1.8
RHBDD3-206ENST00000493894 ZNF174Q15697 407 aa26.27■■□□□ 1.8
RHBDD3-206ENST00000493894 AMHR2Q16671 573 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms