RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 SYCP3Q8IZU3 236 aa13.87□□□□□ -0.19
VPS52-220ENST00000493674 METTL13Q8N6R0 699 aa13.87□□□□□ -0.19
VPS52-220ENST00000493674 RNF149Q8NC42 400 aa13.87□□□□□ -0.19
VPS52-220ENST00000493674 SH3TC2Q8TF17 1288 aa13.87□□□□□ -0.19
VPS52-220ENST00000493674 EEF2KMTQ96G04 330 aa13.87□□□□□ -0.19
VPS52-220ENST00000493674 MAP7D2Q96T17 732 aa13.87□□□□□ -0.19
VPS52-220ENST00000493674 FZD8Q9H461 694 aa13.87□□□□□ -0.19
VPS52-220ENST00000493674 C17orf102A2RUQ5 167 aa13.86□□□□□ -0.19
VPS52-220ENST00000493674 MOXD2PA6NHM9 499 aa13.86□□□□□ -0.19
VPS52-220ENST00000493674 CCDC85CA6NKD9 419 aa13.86□□□□□ -0.19
VPS52-220ENST00000493674 LGALS16A8MUM7 142 aa13.86□□□□□ -0.19
VPS52-220ENST00000493674 CLIC2O15247 247 aa13.86□□□□□ -0.19
VPS52-220ENST00000493674 TREHO43280 583 aa13.86□□□□□ -0.19
VPS52-220ENST00000493674 AKAP3O75969 853 aa13.86□□□□□ -0.19
VPS52-220ENST00000493674 GNAT1P11488 350 aa13.86□□□□□ -0.19
VPS52-220ENST00000493674 GARTP22102 1010 aa13.86□□□□□ -0.19
VPS52-220ENST00000493674 CASP4P49662 377 aa13.86□□□□□ -0.19
VPS52-220ENST00000493674 GPC3P51654 580 aa13.86□□□□□ -0.19
VPS52-220ENST00000493674 ACLYP53396 1101 aa13.86□□□□□ -0.19
VPS52-220ENST00000493674 PLCB2Q00722 1185 aa13.86□□□□□ -0.19
VPS52-220ENST00000493674 MAN2A1Q16706 1144 aa13.86□□□□□ -0.19
VPS52-220ENST00000493674 ZPBP2Q6X784 338 aa13.86□□□□□ -0.19
VPS52-220ENST00000493674 RUFY4Q6ZNE9 571 aa13.86□□□□□ -0.19
VPS52-220ENST00000493674 FRMD5Q7Z6J6 570 aa13.86□□□□□ -0.19
VPS52-220ENST00000493674 ZBTB8OSQ8IWT0 167 aa13.86□□□□□ -0.19
VPS52-220ENST00000493674 ANKRD20A12PQ8NF67 263 aa13.86□□□□□ -0.19
VPS52-220ENST00000493674 FBXL18Q96ME1 805 aa13.86□□□□□ -0.19
VPS52-220ENST00000493674 TUBGCP2Q9BSJ2 902 aa13.86□□□□□ -0.19
VPS52-220ENST00000493674 UNC93B1Q9H1C4 597 aa13.86□□□□□ -0.19
VPS52-220ENST00000493674 ADAMTS10Q9H324 1103 aa13.86□□□□□ -0.19
VPS52-220ENST00000493674 TAB2Q9NYJ8 693 aa13.86□□□□□ -0.19
VPS52-220ENST00000493674 MAGEC2Q9UBF1 373 aaPredicted RBP13.86□□□□□ -0.19
VPS52-220ENST00000493674 ALPK3Q96L96 1907 aa13.86□□□□□ -0.19
VPS52-220ENST00000493674 SCN5AQ14524 2016 aa13.85□□□□□ -0.19
VPS52-220ENST00000493674 K7ERI5 159 aa13.85□□□□□ -0.19
VPS52-220ENST00000493674 ABLIM1O14639 778 aa13.85□□□□□ -0.19
VPS52-220ENST00000493674 GPR32O75388 356 aa13.85□□□□□ -0.19
VPS52-220ENST00000493674 VTNP04004 478 aa13.85□□□□□ -0.19
VPS52-220ENST00000493674 SRGAP2CP0DJJ0 459 aa13.85□□□□□ -0.19
VPS52-220ENST00000493674 CYP2C9P11712 490 aa13.85□□□□□ -0.19
VPS52-220ENST00000493674 PROZP22891 400 aa13.85□□□□□ -0.19
VPS52-220ENST00000493674 PHKA2P46019 1235 aa13.85□□□□□ -0.19
VPS52-220ENST00000493674 CDC42EP1Q00587 391 aa13.85□□□□□ -0.19
VPS52-220ENST00000493674 PTPN11Q06124 597 aaPredicted RBP13.85□□□□□ -0.19
VPS52-220ENST00000493674 STRN3Q13033 797 aa13.85□□□□□ -0.19
VPS52-220ENST00000493674 AMHR2Q16671 573 aa13.85□□□□□ -0.19
VPS52-220ENST00000493674 GDF6Q6KF10 455 aaPredicted RBP13.85□□□□□ -0.19
VPS52-220ENST00000493674 RPAINQ86UA6 219 aa13.85□□□□□ -0.19
VPS52-220ENST00000493674 VSTM4Q8IW00 320 aa13.85□□□□□ -0.19
VPS52-220ENST00000493674 ZNF710Q8N1W2 664 aa13.85□□□□□ -0.19
VPS52-220ENST00000493674 C7orf31Q8N865 590 aa13.85□□□□□ -0.19
VPS52-220ENST00000493674 SLC43A3Q8NBI5 491 aa13.85□□□□□ -0.19
VPS52-220ENST00000493674 PPP1R13LQ8WUF5 828 aa13.85□□□□□ -0.19
VPS52-220ENST00000493674 CBWD1Q9BRT8 395 aa13.85□□□□□ -0.19
VPS52-220ENST00000493674 MINDY3Q9H8M7 445 aa13.85□□□□□ -0.19
VPS52-220ENST00000493674 HSPBP1Q9NZL4 362 aa13.85□□□□□ -0.19
VPS52-220ENST00000493674 PHF24Q9UPV7 400 aa13.85□□□□□ -0.19
VPS52-220ENST00000493674 AKT3Q9Y243 479 aa13.85□□□□□ -0.19
VPS52-220ENST00000493674 TDRD15B5MCY1 1934 aaKnown RBP13.85□□□□□ -0.19
VPS52-220ENST00000493674 A0A087WZ62 844 aa13.84□□□□□ -0.19
VPS52-220ENST00000493674 TTLL13PA6NNM8 815 aa13.84□□□□□ -0.19
VPS52-220ENST00000493674 ACKR2O00590 384 aa13.84□□□□□ -0.19
VPS52-220ENST00000493674 HNRNPDLO14979 420 aaKnown RBP13.84□□□□□ -0.19
VPS52-220ENST00000493674 KIAA0391O15091 583 aaKnown RBP13.84□□□□□ -0.19
VPS52-220ENST00000493674 TEX33O43247 280 aa13.84□□□□□ -0.19
VPS52-220ENST00000493674 PRKCBP05771 671 aa13.84□□□□□ -0.19
VPS52-220ENST00000493674 TPM3P06753 285 aa13.84□□□□□ -0.19
VPS52-220ENST00000493674 IQCF3P0C7M6 154 aa13.84□□□□□ -0.19
VPS52-220ENST00000493674 PSMC2P35998 433 aaKnown RBP13.84□□□□□ -0.19
VPS52-220ENST00000493674 MTIF2P46199 727 aaKnown RBP13.84□□□□□ -0.19
VPS52-220ENST00000493674 ZNF200P98182 395 aaPredicted RBP13.84□□□□□ -0.19
VPS52-220ENST00000493674 ENPEPQ07075 957 aa13.84□□□□□ -0.19
VPS52-220ENST00000493674 MAPK6Q16659 721 aa13.84□□□□□ -0.19
VPS52-220ENST00000493674 TAF2Q6P1X5 1199 aa13.84□□□□□ -0.19
VPS52-220ENST00000493674 SERINC5Q86VE9 423 aa13.84□□□□□ -0.19
VPS52-220ENST00000493674 XXYLT1Q8NBI6 393 aa13.84□□□□□ -0.19
VPS52-220ENST00000493674 PRIMPOLQ96LW4 560 aa13.84□□□□□ -0.19
VPS52-220ENST00000493674 NLRP4Q96MN2 994 aa13.84□□□□□ -0.19
VPS52-220ENST00000493674 ACO2Q99798 780 aaKnown RBP13.84□□□□□ -0.19
VPS52-220ENST00000493674 FDXACB1Q9BRP7 624 aaPredicted RBP13.84□□□□□ -0.19
VPS52-220ENST00000493674 TMEM106CQ9BVX2 250 aa13.84□□□□□ -0.19
VPS52-220ENST00000493674 MRPL4Q9BYD3 311 aaKnown RBP13.84□□□□□ -0.19
VPS52-220ENST00000493674 HAPLN2Q9GZV7 340 aa13.84□□□□□ -0.19
VPS52-220ENST00000493674 VPS16Q9H269 839 aa13.84□□□□□ -0.19
VPS52-220ENST00000493674 METTL14Q9HCE5 456 aaKnown RBP13.84□□□□□ -0.19
VPS52-220ENST00000493674 PTPRHQ9HD43 1115 aa13.84□□□□□ -0.19
VPS52-220ENST00000493674 OGDHLQ9ULD0 1010 aa13.84□□□□□ -0.19
VPS52-220ENST00000493674 ITIH6Q6UXX5 1313 aa13.84□□□□□ -0.19
VPS52-220ENST00000493674 CNTNAP2Q9UHC6 1331 aa13.84□□□□□ -0.19
VPS52-220ENST00000493674 PDE4DIPQ5VU43 2346 aa13.83□□□□□ -0.2
VPS52-220ENST00000493674 A0A1W2PQ45 241 aaPredicted RBP13.83□□□□□ -0.2
VPS52-220ENST00000493674 A0A1W2PQC6 194 aa13.83□□□□□ -0.2
VPS52-220ENST00000493674 A0A1W2PQY0 241 aa13.83□□□□□ -0.2
VPS52-220ENST00000493674 N4BP3O15049 544 aa13.83□□□□□ -0.2
VPS52-220ENST00000493674 FAM189A1O60320 539 aa13.83□□□□□ -0.2
VPS52-220ENST00000493674 RPLP2P05387 115 aaKnown RBP13.83□□□□□ -0.2
VPS52-220ENST00000493674 ADRB2P07550 413 aa13.83□□□□□ -0.2
VPS52-220ENST00000493674 EPB41P11171 864 aaKnown RBP13.83□□□□□ -0.2
VPS52-220ENST00000493674 CCL5P13501 91 aa13.83□□□□□ -0.2
VPS52-220ENST00000493674 CYP2J2P51589 502 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms