RNA–Protein interactions for RNA: ENST00000493653.1

PDS5B-208, Transcript of PDS5 cohesin associated factor B, humanhuman

TSL 1 (best)

Gene PDS5B, Length 972 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5B-208ENST00000493653 DYDC2Q96IM9 177 aa13.18□□□□□ -0.3
PDS5B-208ENST00000493653 NGRNQ9NPE2 291 aaKnown RBP13.18□□□□□ -0.3
PDS5B-208ENST00000493653 CHST12Q9NRB3 414 aa13.18□□□□□ -0.3
PDS5B-208ENST00000493653 AGPAT5Q9NUQ2 364 aa13.18□□□□□ -0.3
PDS5B-208ENST00000493653 FAM105AQ9NUU6 356 aa13.18□□□□□ -0.3
PDS5B-208ENST00000493653 PPP4R2Q9NY27 417 aa13.18□□□□□ -0.3
PDS5B-208ENST00000493653 RGL1Q9NZL6 768 aa13.18□□□□□ -0.3
PDS5B-208ENST00000493653 WDFY4Q6ZS81 3184 aa13.18□□□□□ -0.3
PDS5B-208ENST00000493653 PIEZO1Q92508 2521 aa13.18□□□□□ -0.3
PDS5B-208ENST00000493653 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.17□□□□□ -0.3
PDS5B-208ENST00000493653 JAK2O60674 1132 aa13.17□□□□□ -0.3
PDS5B-208ENST00000493653 FDPSP14324 419 aaKnown RBP13.17□□□□□ -0.3
PDS5B-208ENST00000493653 SP100P23497 879 aaPredicted RBP13.17□□□□□ -0.3
PDS5B-208ENST00000493653 ALDH7A1P49419 539 aaKnown RBP13.17□□□□□ -0.3
PDS5B-208ENST00000493653 SPIRE1Q08AE8 756 aa13.17□□□□□ -0.3
PDS5B-208ENST00000493653 EPHA7Q15375 998 aa13.17□□□□□ -0.3
PDS5B-208ENST00000493653 ANKRD54Q6NXT1 300 aa13.17□□□□□ -0.3
PDS5B-208ENST00000493653 C4orf19Q8IY42 314 aa13.17□□□□□ -0.3
PDS5B-208ENST00000493653 SLFN12Q8IYM2 578 aa13.17□□□□□ -0.3
PDS5B-208ENST00000493653 NSUN7Q8NE18 718 aaKnown RBP13.17□□□□□ -0.3
PDS5B-208ENST00000493653 SUSD6Q92537 303 aa13.17□□□□□ -0.3
PDS5B-208ENST00000493653 TNFRSF25Q93038 417 aa13.17□□□□□ -0.3
PDS5B-208ENST00000493653 RPGRIP1Q96KN7 1286 aa13.17□□□□□ -0.3
PDS5B-208ENST00000493653 PHF7Q9BWX1 381 aaPredicted RBP13.17□□□□□ -0.3
PDS5B-208ENST00000493653 GBP3Q9H0R5 595 aa13.17□□□□□ -0.3
PDS5B-208ENST00000493653 DHX33Q9H6R0 707 aaKnown RBP13.17□□□□□ -0.3
PDS5B-208ENST00000493653 IFT122Q9HBG6 1241 aa13.17□□□□□ -0.3
PDS5B-208ENST00000493653 TBC1D13Q9NVG8 400 aa13.17□□□□□ -0.3
PDS5B-208ENST00000493653 PPME1Q9Y570 386 aa13.17□□□□□ -0.3
PDS5B-208ENST00000493653 ZNF318Q5VUA4 2279 aa13.16□□□□□ -0.3
PDS5B-208ENST00000493653 TECTAO75443 2155 aa13.16□□□□□ -0.3
PDS5B-208ENST00000493653 C2orf71A6NGG8 1288 aa13.16□□□□□ -0.3
PDS5B-208ENST00000493653 LOC730098B7Z3J9 87 aa13.16□□□□□ -0.3
PDS5B-208ENST00000493653 BAG4O95429 457 aaKnown RBP13.16□□□□□ -0.3
PDS5B-208ENST00000493653 SRGAP2CP0DJJ0 459 aa13.16□□□□□ -0.3
PDS5B-208ENST00000493653 SKIP12755 728 aa13.16□□□□□ -0.3
PDS5B-208ENST00000493653 RNASELQ05823 741 aaKnown RBP13.16□□□□□ -0.3
PDS5B-208ENST00000493653 LAMTOR4Q0VGL1 99 aa13.16□□□□□ -0.3
PDS5B-208ENST00000493653 KCNC3Q14003 757 aa13.16□□□□□ -0.3
PDS5B-208ENST00000493653 CBX2Q14781 532 aaPredicted RBP13.16□□□□□ -0.3
PDS5B-208ENST00000493653 XKR9Q5GH70 373 aa13.16□□□□□ -0.3
PDS5B-208ENST00000493653 NOMO2Q5JPE7 1267 aa13.16□□□□□ -0.3
PDS5B-208ENST00000493653 HFE2Q6ZVN8 426 aa13.16□□□□□ -0.3
PDS5B-208ENST00000493653 DIS3L2Q8IYB7 885 aaKnown RBP13.16□□□□□ -0.3
PDS5B-208ENST00000493653 RNF149Q8NC42 400 aa13.16□□□□□ -0.3
PDS5B-208ENST00000493653 BCL7CQ8WUZ0 217 aaPredicted RBP13.16□□□□□ -0.3
PDS5B-208ENST00000493653 PRPF31Q8WWY3 499 aaKnown RBP13.16□□□□□ -0.3
PDS5B-208ENST00000493653 RSPH1Q8WYR4 309 aa13.16□□□□□ -0.3
PDS5B-208ENST00000493653 CCDC43Q96MW1 224 aaKnown RBP13.16□□□□□ -0.3
PDS5B-208ENST00000493653 DCBLD2Q96PD2 775 aa13.16□□□□□ -0.3
PDS5B-208ENST00000493653 MTRQ99707 1265 aa13.16□□□□□ -0.3
PDS5B-208ENST00000493653 ZBP1Q9H171 429 aa13.16□□□□□ -0.3
PDS5B-208ENST00000493653 ZSWIM4Q9H7M6 989 aa13.16□□□□□ -0.3
PDS5B-208ENST00000493653 MINDY3Q9H8M7 445 aa13.16□□□□□ -0.3
PDS5B-208ENST00000493653 CDH22Q9UJ99 828 aa13.16□□□□□ -0.3
PDS5B-208ENST00000493653 PCDHB2Q9Y5E7 798 aa13.16□□□□□ -0.3
PDS5B-208ENST00000493653 HCFC2Q9Y5Z7 792 aa13.16□□□□□ -0.3
PDS5B-208ENST00000493653 WNT7AO00755 349 aa13.15□□□□□ -0.3
PDS5B-208ENST00000493653 ZBTB39O15060 712 aa13.15□□□□□ -0.3
PDS5B-208ENST00000493653 GAS2O43903 313 aaKnown RBP13.15□□□□□ -0.3
PDS5B-208ENST00000493653 B4GALT3O60512 393 aa13.15□□□□□ -0.3
PDS5B-208ENST00000493653 NEMFO60524 1076 aa13.15□□□□□ -0.3
PDS5B-208ENST00000493653 ERLIN2O94905 339 aa13.15□□□□□ -0.3
PDS5B-208ENST00000493653 TRIM29Q14134 588 aa13.15□□□□□ -0.3
PDS5B-208ENST00000493653 CALCRLQ16602 461 aa13.15□□□□□ -0.3
PDS5B-208ENST00000493653 SYCE2Q6PIF2 218 aa13.15□□□□□ -0.3
PDS5B-208ENST00000493653 TMEM184AQ6ZMB5 413 aa13.15□□□□□ -0.3
PDS5B-208ENST00000493653 SRGAP1Q7Z6B7 1085 aa13.15□□□□□ -0.3
PDS5B-208ENST00000493653 TPH2Q8IWU9 490 aa13.15□□□□□ -0.3
PDS5B-208ENST00000493653 EXOC8Q8IYI6 725 aa13.15□□□□□ -0.3
PDS5B-208ENST00000493653 VPS52Q8N1B4 723 aa13.15□□□□□ -0.3
PDS5B-208ENST00000493653 URGCPQ8TCY9 931 aa13.15□□□□□ -0.3
PDS5B-208ENST00000493653 TCP11Q8WWU5 503 aa13.15□□□□□ -0.3
PDS5B-208ENST00000493653 AUTS2Q8WXX7 1259 aa13.15□□□□□ -0.3
PDS5B-208ENST00000493653 CASP10Q92851 521 aa13.15□□□□□ -0.3
PDS5B-208ENST00000493653 DNAJB4Q9UDY4 337 aa13.15□□□□□ -0.3
PDS5B-208ENST00000493653 BTBD18B2RXH4 712 aa13.14□□□□□ -0.31
PDS5B-208ENST00000493653 SLC11A1P49279 550 aa13.14□□□□□ -0.31
PDS5B-208ENST00000493653 NEK4P51957 841 aa13.14□□□□□ -0.31
PDS5B-208ENST00000493653 ST3GAL1Q11201 340 aa13.14□□□□□ -0.31
PDS5B-208ENST00000493653 BMS1Q14692 1282 aaKnown RBP13.14□□□□□ -0.31
PDS5B-208ENST00000493653 OTUD6AQ7L8S5 288 aa13.14□□□□□ -0.31
PDS5B-208ENST00000493653 FERMT3Q86UX7 667 aa13.14□□□□□ -0.31
PDS5B-208ENST00000493653 PGBD4Q96DM1 585 aa13.14□□□□□ -0.31
PDS5B-208ENST00000493653 IGSF21Q96ID5 467 aa13.14□□□□□ -0.31
PDS5B-208ENST00000493653 EIF2AK1Q9BQI3 630 aaKnown RBP13.14□□□□□ -0.31
PDS5B-208ENST00000493653 NRDE2Q9H7Z3 1164 aa13.14□□□□□ -0.31
PDS5B-208ENST00000493653 RSAD1Q9HA92 442 aa13.14□□□□□ -0.31
PDS5B-208ENST00000493653 XPNPEP1Q9NQW7 623 aa13.14□□□□□ -0.31
PDS5B-208ENST00000493653 ZDBF2Q9HCK1 2354 aa13.14□□□□□ -0.31
PDS5B-208ENST00000493653 CNTNAP2Q9UHC6 1331 aa13.13□□□□□ -0.31
PDS5B-208ENST00000493653 CARNS1A5YM72 827 aa13.13□□□□□ -0.31
PDS5B-208ENST00000493653 POTEMA6NI47 508 aa13.13□□□□□ -0.31
PDS5B-208ENST00000493653 TSPAN1O60635 241 aa13.13□□□□□ -0.31
PDS5B-208ENST00000493653 CLASP2O75122 1294 aaKnown RBP13.13□□□□□ -0.31
PDS5B-208ENST00000493653 ZNF623O75123 536 aa13.13□□□□□ -0.31
PDS5B-208ENST00000493653 OFD1O75665 1012 aa13.13□□□□□ -0.31
PDS5B-208ENST00000493653 HOXB8P17481 243 aaPredicted RBP13.13□□□□□ -0.31
PDS5B-208ENST00000493653 UBXN11Q5T124 520 aa13.13□□□□□ -0.31
PDS5B-208ENST00000493653 AGMOQ6ZNB7 445 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms