RNA–Protein interactions for RNA: ENST00000493185.2

CLTA-208, Transcript of clathrin light chain A, humanhuman

TSL 3

Gene CLTA, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-208ENST00000493185 ARL2P36404 184 aa22.86■■□□□ 1.25
CLTA-208ENST00000493185 TECP42680 631 aa22.86■■□□□ 1.25
CLTA-208ENST00000493185 TTC38Q5R3I4 469 aa22.86■■□□□ 1.25
CLTA-208ENST00000493185 NOTUMQ6P988 496 aa22.86■■□□□ 1.25
CLTA-208ENST00000493185 AGMOQ6ZNB7 445 aa22.86■■□□□ 1.25
CLTA-208ENST00000493185 MRPL10Q7Z7H8 261 aaKnown RBP22.86■■□□□ 1.25
CLTA-208ENST00000493185 IFNLR1Q8IU57 520 aaPredicted RBP22.86■■□□□ 1.25
CLTA-208ENST00000493185 NOSTRINQ8IVI9 506 aa22.86■■□□□ 1.25
CLTA-208ENST00000493185 CNNM3Q8NE01 707 aa22.86■■□□□ 1.25
CLTA-208ENST00000493185 VN1R2Q8NFZ6 395 aa22.86■■□□□ 1.25
CLTA-208ENST00000493185 CCDC51Q96ER9 411 aa22.86■■□□□ 1.25
CLTA-208ENST00000493185 GBP3Q9H0R5 595 aa22.86■■□□□ 1.25
CLTA-208ENST00000493185 NRDE2Q9H7Z3 1164 aa22.86■■□□□ 1.25
CLTA-208ENST00000493185 NOL7Q9UMY1 257 aaKnown RBP22.86■■□□□ 1.25
CLTA-208ENST00000493185 USP15Q9Y4E8 981 aaPredicted RBP22.86■■□□□ 1.25
CLTA-208ENST00000493185 FAM86C2PA6NEL3 165 aa22.85■■□□□ 1.25
CLTA-208ENST00000493185 DCXO43602 365 aa22.85■■□□□ 1.25
CLTA-208ENST00000493185 USO1O60763 962 aaKnown RBP22.85■■□□□ 1.25
CLTA-208ENST00000493185 SPATA31C1P0DKV0 1188 aa22.85■■□□□ 1.25
CLTA-208ENST00000493185 CA8P35219 290 aa22.85■■□□□ 1.25
CLTA-208ENST00000493185 TRAPPC10P48553 1259 aa22.85■■□□□ 1.25
CLTA-208ENST00000493185 RBM10P98175 930 aaKnown RBP22.85■■□□□ 1.25
CLTA-208ENST00000493185 CAPSQ13938 189 aa22.85■■□□□ 1.25
CLTA-208ENST00000493185 UBXN11Q5T124 520 aa22.85■■□□□ 1.25
CLTA-208ENST00000493185 TMEM184AQ6ZMB5 413 aa22.85■■□□□ 1.25
CLTA-208ENST00000493185 CATSPER3Q86XQ3 398 aa22.85■■□□□ 1.25
CLTA-208ENST00000493185 MRPL43Q8N983 215 aaKnown RBP22.85■■□□□ 1.25
CLTA-208ENST00000493185 ASAP3Q8TDY4 903 aa22.85■■□□□ 1.25
CLTA-208ENST00000493185 POLR3FQ9H1D9 316 aaPredicted RBP22.85■■□□□ 1.25
CLTA-208ENST00000493185 KANSL3Q9P2N6 904 aa22.85■■□□□ 1.25
CLTA-208ENST00000493185 A0A087WWV3 80 aa22.84■■□□□ 1.25
CLTA-208ENST00000493185 TSPAN1O60635 241 aa22.84■■□□□ 1.25
CLTA-208ENST00000493185 GALTP07902 379 aa22.84■■□□□ 1.25
CLTA-208ENST00000493185 NCLP19338 710 aaKnown RBP22.84■■□□□ 1.25
CLTA-208ENST00000493185 GLRA2P23416 452 aa22.84■■□□□ 1.25
CLTA-208ENST00000493185 KCNC3Q14003 757 aa22.84■■□□□ 1.25
CLTA-208ENST00000493185 RABEP1Q15276 862 aa22.84■■□□□ 1.25
CLTA-208ENST00000493185 LLGL2Q6P1M3 1020 aa22.84■■□□□ 1.25
CLTA-208ENST00000493185 VPS52Q8N1B4 723 aa22.84■■□□□ 1.25
CLTA-208ENST00000493185 TMEM87AQ8NBN3 555 aa22.84■■□□□ 1.25
CLTA-208ENST00000493185 MCPH1Q8NEM0 835 aa22.84■■□□□ 1.25
CLTA-208ENST00000493185 IGSF21Q96ID5 467 aa22.84■■□□□ 1.25
CLTA-208ENST00000493185 FAM193BQ96PV7 902 aaPredicted RBP22.84■■□□□ 1.25
CLTA-208ENST00000493185 NACC1Q96RE7 527 aa22.84■■□□□ 1.25
CLTA-208ENST00000493185 POLR3CQ9BUI4 534 aaPredicted RBP22.84■■□□□ 1.25
CLTA-208ENST00000493185 NFKBIZQ9BYH8 718 aa22.84■■□□□ 1.25
CLTA-208ENST00000493185 UBN1Q9NPG3 1134 aa22.84■■□□□ 1.25
CLTA-208ENST00000493185 C11orf16Q9NQ32 467 aa22.84■■□□□ 1.25
CLTA-208ENST00000493185 DBR1Q9UK59 544 aaKnown RBP22.84■■□□□ 1.25
CLTA-208ENST00000493185 C2orf71A6NGG8 1288 aa22.83■■□□□ 1.25
CLTA-208ENST00000493185 MED24O75448 989 aa22.83■■□□□ 1.25
CLTA-208ENST00000493185 ITGA4P13612 1032 aa22.83■■□□□ 1.25
CLTA-208ENST00000493185 MBTD1Q05BQ5 628 aa22.83■■□□□ 1.25
CLTA-208ENST00000493185 DDX53Q86TM3 631 aaKnown RBP22.83■■□□□ 1.25
CLTA-208ENST00000493185 TMEM173Q86WV6 379 aaPredicted RBP22.83■■□□□ 1.25
CLTA-208ENST00000493185 CASP10Q92851 521 aa22.83■■□□□ 1.25
CLTA-208ENST00000493185 CPB2Q96IY4 423 aa22.83■■□□□ 1.25
CLTA-208ENST00000493185 DNAJB4Q9UDY4 337 aa22.83■■□□□ 1.25
CLTA-208ENST00000493185 RAPGEFL1Q9UHV5 662 aa22.83■■□□□ 1.25
CLTA-208ENST00000493185 ST18O60284 1047 aa22.82■■□□□ 1.24
CLTA-208ENST00000493185 CXCL14O95715 111 aa22.82■■□□□ 1.24
CLTA-208ENST00000493185 HOXB8P17481 243 aaPredicted RBP22.82■■□□□ 1.24
CLTA-208ENST00000493185 RPA1P27694 616 aa22.82■■□□□ 1.24
CLTA-208ENST00000493185 SLC11A1P49279 550 aa22.82■■□□□ 1.24
CLTA-208ENST00000493185 HAUS3Q68CZ6 603 aa22.82■■□□□ 1.24
CLTA-208ENST00000493185 ANKRD54Q6NXT1 300 aa22.82■■□□□ 1.24
CLTA-208ENST00000493185 POTEGQ6S5H5 508 aa22.82■■□□□ 1.24
CLTA-208ENST00000493185 MAEAQ7L5Y9 396 aa22.82■■□□□ 1.24
CLTA-208ENST00000493185 HACE1Q8IYU2 909 aa22.82■■□□□ 1.24
CLTA-208ENST00000493185 TRIM6Q9C030 488 aaPredicted RBP22.82■■□□□ 1.24
CLTA-208ENST00000493185 ZBP1Q9H171 429 aa22.82■■□□□ 1.24
CLTA-208ENST00000493185 CSRNP2Q9H175 543 aa22.82■■□□□ 1.24
CLTA-208ENST00000493185 KIF3AQ9Y496 699 aa22.82■■□□□ 1.24
CLTA-208ENST00000493185 IPPQ9Y573 584 aa22.82■■□□□ 1.24
CLTA-208ENST00000493185 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.81■■□□□ 1.24
CLTA-208ENST00000493185 LRRIQ4A6NIV6 560 aa22.81■■□□□ 1.24
CLTA-208ENST00000493185 GIT2Q14161 759 aa22.81■■□□□ 1.24
CLTA-208ENST00000493185 ZNF280BQ86YH2 543 aa22.81■■□□□ 1.24
CLTA-208ENST00000493185 SMG8Q8ND04 991 aaKnown RBP22.81■■□□□ 1.24
CLTA-208ENST00000493185 SUSD6Q92537 303 aa22.81■■□□□ 1.24
CLTA-208ENST00000493185 TMEM175Q9BSA9 504 aa22.81■■□□□ 1.24
CLTA-208ENST00000493185 PHF7Q9BWX1 381 aaPredicted RBP22.81■■□□□ 1.24
CLTA-208ENST00000493185 EIF2AQ9BY44 585 aaKnown RBP22.81■■□□□ 1.24
CLTA-208ENST00000493185 UPF2Q9HAU5 1272 aaKnown RBP22.81■■□□□ 1.24
CLTA-208ENST00000493185 STK39Q9UEW8 545 aa22.81■■□□□ 1.24
CLTA-208ENST00000493185 HCN4Q9Y3Q4 1203 aa22.81■■□□□ 1.24
CLTA-208ENST00000493185 ARHGEF35A5YM69 484 aa22.8■■□□□ 1.24
CLTA-208ENST00000493185 POMCP01189 267 aa22.8■■□□□ 1.24
CLTA-208ENST00000493185 ALDH2P05091 517 aa22.8■■□□□ 1.24
CLTA-208ENST00000493185 CTSAP10619 480 aa22.8■■□□□ 1.24
CLTA-208ENST00000493185 ARF4P18085 180 aaPredicted RBP22.8■■□□□ 1.24
CLTA-208ENST00000493185 U2AF2P26368 475 aaKnown RBP eCLIP22.8■■□□□ 1.24
CLTA-208ENST00000493185 AMHR2Q16671 573 aa22.8■■□□□ 1.24
CLTA-208ENST00000493185 RNF135Q8IUD6 432 aa22.8■■□□□ 1.24
CLTA-208ENST00000493185 GPRC5CQ9NQ84 441 aa22.8■■□□□ 1.24
CLTA-208ENST00000493185 FAN1Q9Y2M0 1017 aa22.8■■□□□ 1.24
CLTA-208ENST00000493185 HCFC2Q9Y5Z7 792 aa22.8■■□□□ 1.24
CLTA-208ENST00000493185 PRR33A8MZF0 331 aa22.79■■□□□ 1.24
CLTA-208ENST00000493185 B4GALT3O60512 393 aa22.79■■□□□ 1.24
CLTA-208ENST00000493185 CLASP2O75122 1294 aaKnown RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms