RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 ODF2LQ9ULJ1 636 aa14.11□□□□□ -0.15
CLIP2-209ENST00000493166 CITO14578 2027 aa14.1□□□□□ -0.15
CLIP2-209ENST00000493166 PLXNA4Q9HCM2 1894 aa14.1□□□□□ -0.15
CLIP2-209ENST00000493166 ATG2AQ2TAZ0 1938 aa14.1□□□□□ -0.15
CLIP2-209ENST00000493166 B4GALT5O43286 388 aa14.1□□□□□ -0.15
CLIP2-209ENST00000493166 HOXA2O43364 376 aa14.1□□□□□ -0.15
CLIP2-209ENST00000493166 TBCAO75347 108 aaKnown RBP14.1□□□□□ -0.15
CLIP2-209ENST00000493166 FAM13AO94988 1023 aa14.1□□□□□ -0.15
CLIP2-209ENST00000493166 EOMESO95936 686 aa14.1□□□□□ -0.15
CLIP2-209ENST00000493166 FGFR1P11362 822 aa14.1□□□□□ -0.15
CLIP2-209ENST00000493166 PLS3P13797 630 aa14.1□□□□□ -0.15
CLIP2-209ENST00000493166 ARF4P18085 180 aaPredicted RBP14.1□□□□□ -0.15
CLIP2-209ENST00000493166 HOXA11P31270 313 aaPredicted RBP14.1□□□□□ -0.15
CLIP2-209ENST00000493166 GATMP50440 423 aa14.1□□□□□ -0.15
CLIP2-209ENST00000493166 PRPF4BQ13523 1007 aaKnown RBP14.1□□□□□ -0.15
CLIP2-209ENST00000493166 GRIN2CQ14957 1233 aa14.1□□□□□ -0.15
CLIP2-209ENST00000493166 AMHR2Q16671 573 aa14.1□□□□□ -0.15
CLIP2-209ENST00000493166 FAM187BQ17R55 369 aa14.1□□□□□ -0.15
CLIP2-209ENST00000493166 TMEM132AQ24JP5 1023 aa14.1□□□□□ -0.15
CLIP2-209ENST00000493166 NAALADL2Q58DX5 795 aa14.1□□□□□ -0.15
CLIP2-209ENST00000493166 PPP4R3CPQ6ZMV5 832 aa14.1□□□□□ -0.15
CLIP2-209ENST00000493166 SV2BQ7L1I2 683 aa14.1□□□□□ -0.15
CLIP2-209ENST00000493166 CMTR2Q8IYT2 770 aaKnown RBP14.1□□□□□ -0.15
CLIP2-209ENST00000493166 ABI1Q8IZP0 508 aa14.1□□□□□ -0.15
CLIP2-209ENST00000493166 ARNTL2Q8WYA1 636 aa14.1□□□□□ -0.15
CLIP2-209ENST00000493166 TGS1Q96RS0 853 aaKnown RBP14.1□□□□□ -0.15
CLIP2-209ENST00000493166 CCDC113Q9H0I3 377 aa14.1□□□□□ -0.15
CLIP2-209ENST00000493166 FZD8Q9H461 694 aa14.1□□□□□ -0.15
CLIP2-209ENST00000493166 LARSQ9P2J5 1176 aaKnown RBP14.1□□□□□ -0.15
CLIP2-209ENST00000493166 KCNG1Q9UIX4 513 aa14.1□□□□□ -0.15
CLIP2-209ENST00000493166 MTUS1Q9ULD2 1270 aa14.1□□□□□ -0.15
CLIP2-209ENST00000493166 PHLPP2Q6ZVD8 1323 aa14.1□□□□□ -0.15
CLIP2-209ENST00000493166 CNTNAP2Q9UHC6 1331 aa14.1□□□□□ -0.15
CLIP2-209ENST00000493166 TBKBP1A7MCY6 615 aa14.09□□□□□ -0.15
CLIP2-209ENST00000493166 K7ERI5 159 aa14.09□□□□□ -0.15
CLIP2-209ENST00000493166 SLC16A4O15374 487 aa14.09□□□□□ -0.15
CLIP2-209ENST00000493166 ATF7P17544 494 aaPredicted RBP14.09□□□□□ -0.15
CLIP2-209ENST00000493166 SMTNP53814 917 aa14.09□□□□□ -0.15
CLIP2-209ENST00000493166 GIT2Q14161 759 aa14.09□□□□□ -0.15
CLIP2-209ENST00000493166 RESP18Q5W5W9 173 aa14.09□□□□□ -0.15
CLIP2-209ENST00000493166 SPRED2Q7Z698 418 aa14.09□□□□□ -0.15
CLIP2-209ENST00000493166 ZNF598Q86UK7 904 aaKnown RBP14.09□□□□□ -0.15
CLIP2-209ENST00000493166 DHX58Q96C10 678 aa14.09□□□□□ -0.15
CLIP2-209ENST00000493166 GUCD1Q96NT3 240 aa14.09□□□□□ -0.15
CLIP2-209ENST00000493166 TRIM6Q9C030 488 aaPredicted RBP14.09□□□□□ -0.15
CLIP2-209ENST00000493166 ZHX3Q9H4I2 956 aa14.09□□□□□ -0.15
CLIP2-209ENST00000493166 PRDM12Q9H4Q4 367 aa14.09□□□□□ -0.15
CLIP2-209ENST00000493166 ARHGAP28Q9P2N2 729 aa14.09□□□□□ -0.15
CLIP2-209ENST00000493166 CIZ1Q9ULV3 898 aaPredicted RBP14.09□□□□□ -0.15
CLIP2-209ENST00000493166 RBM19Q9Y4C8 960 aaKnown RBP14.09□□□□□ -0.15
CLIP2-209ENST00000493166 PCDHB2Q9Y5E7 798 aa14.09□□□□□ -0.15
CLIP2-209ENST00000493166 ACKR2O00590 384 aa14.08□□□□□ -0.16
CLIP2-209ENST00000493166 N4BP3O15049 544 aa14.08□□□□□ -0.16
CLIP2-209ENST00000493166 POLR2DO15514 142 aaKnown RBP14.08□□□□□ -0.16
CLIP2-209ENST00000493166 ZNF623O75123 536 aa14.08□□□□□ -0.16
CLIP2-209ENST00000493166 ERVK-21P61565 698 aa14.08□□□□□ -0.16
CLIP2-209ENST00000493166 LONRF3Q496Y0 759 aa14.08□□□□□ -0.16
CLIP2-209ENST00000493166 UBXN11Q5T124 520 aa14.08□□□□□ -0.16
CLIP2-209ENST00000493166 SLC27A1Q6PCB7 646 aa14.08□□□□□ -0.16
CLIP2-209ENST00000493166 DYMQ7RTS9 669 aa14.08□□□□□ -0.16
CLIP2-209ENST00000493166 MYCT1Q8N699 235 aa14.08□□□□□ -0.16
CLIP2-209ENST00000493166 IQUBQ8NA54 791 aa14.08□□□□□ -0.16
CLIP2-209ENST00000493166 SPIRE2Q8WWL2 714 aa14.08□□□□□ -0.16
CLIP2-209ENST00000493166 MYLIPQ8WY64 445 aa14.08□□□□□ -0.16
CLIP2-209ENST00000493166 DDX12PQ92771 950 aa14.08□□□□□ -0.16
CLIP2-209ENST00000493166 LPPQ93052 612 aa14.08□□□□□ -0.16
CLIP2-209ENST00000493166 PGBD4Q96DM1 585 aa14.08□□□□□ -0.16
CLIP2-209ENST00000493166 SAMD11Q96NU1 681 aa14.08□□□□□ -0.16
CLIP2-209ENST00000493166 GAS2L1Q99501 681 aaPredicted RBP14.08□□□□□ -0.16
CLIP2-209ENST00000493166 CDX2Q99626 313 aaPredicted RBP14.08□□□□□ -0.16
CLIP2-209ENST00000493166 C17orf80Q9BSJ5 609 aa14.08□□□□□ -0.16
CLIP2-209ENST00000493166 EIF2AQ9BY44 585 aaKnown RBP14.08□□□□□ -0.16
CLIP2-209ENST00000493166 TMEM117Q9H0C3 514 aa14.08□□□□□ -0.16
CLIP2-209ENST00000493166 CUEDC2Q9H467 287 aa14.08□□□□□ -0.16
CLIP2-209ENST00000493166 TMEM134Q9H6X4 195 aa14.08□□□□□ -0.16
CLIP2-209ENST00000493166 PARVGQ9HBI0 331 aa14.08□□□□□ -0.16
CLIP2-209ENST00000493166 RNF19AQ9NV58 838 aa14.08□□□□□ -0.16
CLIP2-209ENST00000493166 PRUNE2Q8WUY3 3088 aa14.08□□□□□ -0.16
CLIP2-209ENST00000493166 PDCD11Q14690 1871 aaKnown RBP14.08□□□□□ -0.16
CLIP2-209ENST00000493166 A0A1B0GUA9 196 aa14.07□□□□□ -0.16
CLIP2-209ENST00000493166 MYMKA6NI61 221 aa14.07□□□□□ -0.16
CLIP2-209ENST00000493166 H0YCG3 227 aa14.07□□□□□ -0.16
CLIP2-209ENST00000493166 NPTXRO95502 500 aa14.07□□□□□ -0.16
CLIP2-209ENST00000493166 CTNNB1P35222 781 aa14.07□□□□□ -0.16
CLIP2-209ENST00000493166 ZNF131P52739 623 aa14.07□□□□□ -0.16
CLIP2-209ENST00000493166 STRN3Q13033 797 aa14.07□□□□□ -0.16
CLIP2-209ENST00000493166 E2F4Q16254 413 aa14.07□□□□□ -0.16
CLIP2-209ENST00000493166 CLLU1OSQ5K130 101 aa14.07□□□□□ -0.16
CLIP2-209ENST00000493166 SPOUT1Q5T280 376 aaKnown RBP14.07□□□□□ -0.16
CLIP2-209ENST00000493166 ADALQ6DHV7 355 aa14.07□□□□□ -0.16
CLIP2-209ENST00000493166 CDR2LQ86X02 465 aaPredicted RBP14.07□□□□□ -0.16
CLIP2-209ENST00000493166 HACE1Q8IYU2 909 aa14.07□□□□□ -0.16
CLIP2-209ENST00000493166 CNNM3Q8NE01 707 aa14.07□□□□□ -0.16
CLIP2-209ENST00000493166 FBXO22Q8NEZ5 403 aa14.07□□□□□ -0.16
CLIP2-209ENST00000493166 HELQQ8TDG4 1101 aa14.07□□□□□ -0.16
CLIP2-209ENST00000493166 CASD1Q96PB1 797 aa14.07□□□□□ -0.16
CLIP2-209ENST00000493166 PYM1Q9BRP8 204 aaKnown RBP14.07□□□□□ -0.16
CLIP2-209ENST00000493166 ADPGKQ9BRR6 497 aa14.07□□□□□ -0.16
CLIP2-209ENST00000493166 NTPCRQ9BSD7 190 aaKnown RBP14.07□□□□□ -0.16
CLIP2-209ENST00000493166 TNMDQ9H2S6 317 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms