RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 ITGB8P26012 769 aa10.3□□□□□ -0.76
CSTF1-206ENST00000493039 SMTNP53814 917 aa10.3□□□□□ -0.76
CSTF1-206ENST00000493039 PMS1P54277 932 aaKnown RBP10.3□□□□□ -0.76
CSTF1-206ENST00000493039 PPP2R5AQ15172 486 aa10.3□□□□□ -0.76
CSTF1-206ENST00000493039 BMT2Q1RMZ1 405 aa10.3□□□□□ -0.76
CSTF1-206ENST00000493039 COBLL1Q53SF7 1204 aa10.3□□□□□ -0.76
CSTF1-206ENST00000493039 FAM26DQ5JW98 314 aa10.3□□□□□ -0.76
CSTF1-206ENST00000493039 ZNF410Q86VK4 478 aa10.3□□□□□ -0.76
CSTF1-206ENST00000493039 NLRP7Q8WX94 980 aa10.3□□□□□ -0.76
CSTF1-206ENST00000493039 VWCEQ96DN2 955 aa10.3□□□□□ -0.76
CSTF1-206ENST00000493039 NOC4LQ9BVI4 516 aaKnown RBP10.3□□□□□ -0.76
CSTF1-206ENST00000493039 KCTD10Q9H3F6 313 aa10.3□□□□□ -0.76
CSTF1-206ENST00000493039 SEMA6BQ9H3T3 888 aa10.3□□□□□ -0.76
CSTF1-206ENST00000493039 TBX20Q9UMR3 447 aa10.3□□□□□ -0.76
CSTF1-206ENST00000493039 ZMYM2Q9UBW7 1377 aa10.3□□□□□ -0.76
CSTF1-206ENST00000493039 TRIM43BA6NCK2 446 aa10.3□□□□□ -0.76
CSTF1-206ENST00000493039 K7ENM7 598 aa10.3□□□□□ -0.76
CSTF1-206ENST00000493039 TGFB1I1O43294 461 aa10.3□□□□□ -0.76
CSTF1-206ENST00000493039 EIF4BP23588 611 aaKnown RBP10.3□□□□□ -0.76
CSTF1-206ENST00000493039 CRYBB1P53674 252 aaPredicted RBP10.3□□□□□ -0.76
CSTF1-206ENST00000493039 ZNF445P59923 1031 aa10.3□□□□□ -0.76
CSTF1-206ENST00000493039 SLC39A4Q6P5W5 647 aa10.3□□□□□ -0.76
CSTF1-206ENST00000493039 GUF1Q8N442 669 aaKnown RBP10.3□□□□□ -0.76
CSTF1-206ENST00000493039 ZNF513Q8N8E2 541 aaPredicted RBP10.3□□□□□ -0.76
CSTF1-206ENST00000493039 DEPTORQ8TB45 409 aa10.3□□□□□ -0.76
CSTF1-206ENST00000493039 TRIM43Q96BQ3 446 aaPredicted RBP10.3□□□□□ -0.76
CSTF1-206ENST00000493039 TMEM134Q9H6X4 195 aa10.3□□□□□ -0.76
CSTF1-206ENST00000493039 AGO3Q9H9G7 860 aaKnown RBP10.3□□□□□ -0.76
CSTF1-206ENST00000493039 MROH7Q68CQ1 1323 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 CCDC85CA6NKD9 419 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 DCDC2CA8MYV0 355 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 K7ERI5 159 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 EIF3DO15371 548 aaKnown RBP eCLIP10.29□□□□□ -0.76
CSTF1-206ENST00000493039 B4GALT5O43286 388 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 HOXA11P31270 313 aaPredicted RBP10.29□□□□□ -0.76
CSTF1-206ENST00000493039 CDC42EP1Q00587 391 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 TFDP1Q14186 410 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 ZCWPW2Q504Y3 356 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 SASS6Q6UVJ0 657 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 GAS2L3Q86XJ1 694 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 MAP4K3Q8IVH8 894 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 NELFCDQ8IXH7 590 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 MYOCDQ8IZQ8 938 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 TNS4Q8IZW8 715 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 MLKLQ8NB16 471 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 WNT8AQ9H1J5 351 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 DNAJC25Q9H1X3 360 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 NOC2LQ9Y3T9 749 aaKnown RBP10.29□□□□□ -0.76
CSTF1-206ENST00000493039 PCDHB13Q9Y5F0 798 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 ANKRD63C9JTQ0 380 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 INO80B-WBP1J3KQ70 363 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 ADSSP30520 456 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 PHKA2P46019 1235 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 MTA1Q13330 715 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 SETDB1Q15047 1291 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 FBXO47Q5MNV8 452 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 L1TD1Q5T7N2 865 aaKnown RBP10.29□□□□□ -0.76
CSTF1-206ENST00000493039 CENPPQ6IPU0 288 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 LRSAM1Q6UWE0 723 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 RSPH3Q86UC2 560 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 CAGE1Q8TC20 777 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 CCDC47Q96A33 483 aaKnown RBP10.29□□□□□ -0.76
CSTF1-206ENST00000493039 INO80BQ9C086 356 aaPredicted RBP10.29□□□□□ -0.76
CSTF1-206ENST00000493039 HAPLN2Q9GZV7 340 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 TRPV2Q9Y5S1 764 aa10.29□□□□□ -0.76
CSTF1-206ENST00000493039 MYH11P35749 1972 aa10.28□□□□□ -0.76
CSTF1-206ENST00000493039 TRIM49BA6NDI0 452 aa10.28□□□□□ -0.76
CSTF1-206ENST00000493039 PITPNM1O00562 1244 aa10.28□□□□□ -0.76
CSTF1-206ENST00000493039 ACKR2O00590 384 aa10.28□□□□□ -0.76
CSTF1-206ENST00000493039 ABLIM1O14639 778 aa10.28□□□□□ -0.76
CSTF1-206ENST00000493039 TNRC18O15417 2968 aaPredicted RBP10.28□□□□□ -0.76
CSTF1-206ENST00000493039 NBNO60934 754 aa10.28□□□□□ -0.76
CSTF1-206ENST00000493039 CAND2O75155 1236 aa10.28□□□□□ -0.76
CSTF1-206ENST00000493039 CCDC192P0DO97 292 aa10.28□□□□□ -0.76
CSTF1-206ENST00000493039 CYP2C18P33260 490 aa10.28□□□□□ -0.76
CSTF1-206ENST00000493039 EFNA5P52803 228 aa10.28□□□□□ -0.76
CSTF1-206ENST00000493039 FOXD4Q12950 439 aaPredicted RBP10.28□□□□□ -0.76
CSTF1-206ENST00000493039 LPIN1Q14693 890 aa10.28□□□□□ -0.76
CSTF1-206ENST00000493039 STX1AQ16623 288 aa10.28□□□□□ -0.76
CSTF1-206ENST00000493039 FAM187BQ17R55 369 aa10.28□□□□□ -0.76
CSTF1-206ENST00000493039 KNOP1Q1ED39 458 aaKnown RBP10.28□□□□□ -0.76
CSTF1-206ENST00000493039 ANO6Q4KMQ2 910 aa10.28□□□□□ -0.76
CSTF1-206ENST00000493039 KLHL10Q6JEL2 608 aa10.28□□□□□ -0.76
CSTF1-206ENST00000493039 SRGAP1Q7Z6B7 1085 aa10.28□□□□□ -0.76
CSTF1-206ENST00000493039 FAM228AQ86W67 206 aa10.28□□□□□ -0.76
CSTF1-206ENST00000493039 TARS2Q9BW92 718 aaKnown RBP10.28□□□□□ -0.76
CSTF1-206ENST00000493039 GCOM2Q9BZD3 368 aaPredicted RBP10.28□□□□□ -0.76
CSTF1-206ENST00000493039 PTPRHQ9HD43 1115 aa10.28□□□□□ -0.76
CSTF1-206ENST00000493039 ANO10Q9NW15 660 aa10.28□□□□□ -0.76
CSTF1-206ENST00000493039 TSPAN1O60635 241 aa10.27□□□□□ -0.76
CSTF1-206ENST00000493039 PRKCBP05771 671 aa10.27□□□□□ -0.76
CSTF1-206ENST00000493039 CLTBP09497 229 aa10.27□□□□□ -0.76
CSTF1-206ENST00000493039 SELPP16109 830 aa10.27□□□□□ -0.76
CSTF1-206ENST00000493039 ARF4P18085 180 aaPredicted RBP10.27□□□□□ -0.76
CSTF1-206ENST00000493039 SATB1Q01826 763 aa10.27□□□□□ -0.76
CSTF1-206ENST00000493039 MAPK6Q16659 721 aa10.27□□□□□ -0.76
CSTF1-206ENST00000493039 ANKRD40Q6AI12 368 aa10.27□□□□□ -0.76
CSTF1-206ENST00000493039 TTI2Q6NXR4 508 aa10.27□□□□□ -0.76
CSTF1-206ENST00000493039 PPP4R3CPQ6ZMV5 832 aa10.27□□□□□ -0.76
CSTF1-206ENST00000493039 CDR2LQ86X02 465 aaPredicted RBP10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms