RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 VN1R2Q8NFZ6 395 aa13.87□□□□□ -0.19
COL6A1-205ENST00000492851 LPPQ93052 612 aa13.87□□□□□ -0.19
COL6A1-205ENST00000492851 ZSCAN31Q96LW9 406 aaPredicted RBP13.87□□□□□ -0.19
COL6A1-205ENST00000492851 MTMR9Q96QG7 549 aa13.87□□□□□ -0.19
COL6A1-205ENST00000492851 TMEM175Q9BSA9 504 aa13.87□□□□□ -0.19
COL6A1-205ENST00000492851 NFKBIZQ9BYH8 718 aa13.87□□□□□ -0.19
COL6A1-205ENST00000492851 S1PR5Q9H228 398 aa13.87□□□□□ -0.19
COL6A1-205ENST00000492851 NRDE2Q9H7Z3 1164 aa13.87□□□□□ -0.19
COL6A1-205ENST00000492851 RSAD1Q9HA92 442 aa13.87□□□□□ -0.19
COL6A1-205ENST00000492851 DZANK1Q9NVP4 752 aa13.87□□□□□ -0.19
COL6A1-205ENST00000492851 MUTYHQ9UIF7 546 aa13.87□□□□□ -0.19
COL6A1-205ENST00000492851 SSX2IPQ9Y2D8 614 aa13.87□□□□□ -0.19
COL6A1-205ENST00000492851 INPP5FQ9Y2H2 1132 aa13.87□□□□□ -0.19
COL6A1-205ENST00000492851 NR2E1Q9Y466 385 aa13.87□□□□□ -0.19
COL6A1-205ENST00000492851 BRWD1Q9NSI6 2320 aa13.87□□□□□ -0.19
COL6A1-205ENST00000492851 KIAA1671Q9BY89 1806 aa13.86□□□□□ -0.19
COL6A1-205ENST00000492851 ITGA4P13612 1032 aa13.86□□□□□ -0.19
COL6A1-205ENST00000492851 NCLP19338 710 aaKnown RBP13.86□□□□□ -0.19
COL6A1-205ENST00000492851 HOXA11P31270 313 aaPredicted RBP13.86□□□□□ -0.19
COL6A1-205ENST00000492851 CA8P35219 290 aa13.86□□□□□ -0.19
COL6A1-205ENST00000492851 BMP8AQ7Z5Y6 402 aa13.86□□□□□ -0.19
COL6A1-205ENST00000492851 IFNLR1Q8IU57 520 aaPredicted RBP13.86□□□□□ -0.19
COL6A1-205ENST00000492851 ERMNQ8TAM6 284 aa13.86□□□□□ -0.19
COL6A1-205ENST00000492851 RPGRIP1Q96KN7 1286 aa13.86□□□□□ -0.19
COL6A1-205ENST00000492851 RIPOR3Q96MK2 946 aa13.86□□□□□ -0.19
COL6A1-205ENST00000492851 EMILIN2Q9BXX0 1053 aa13.86□□□□□ -0.19
COL6A1-205ENST00000492851 ADAM7Q9H2U9 754 aa13.86□□□□□ -0.19
COL6A1-205ENST00000492851 FAN1Q9Y2M0 1017 aa13.86□□□□□ -0.19
COL6A1-205ENST00000492851 HCFC2Q9Y5Z7 792 aa13.86□□□□□ -0.19
COL6A1-205ENST00000492851 NT5C1B-RDH14C9J2C7 533 aa13.85□□□□□ -0.19
COL6A1-205ENST00000492851 CLASP2O75122 1294 aaKnown RBP13.85□□□□□ -0.19
COL6A1-205ENST00000492851 ARL2P36404 184 aa13.85□□□□□ -0.19
COL6A1-205ENST00000492851 MTHFRP42898 656 aa13.85□□□□□ -0.19
COL6A1-205ENST00000492851 RBM25P49756 843 aaKnown RBP13.85□□□□□ -0.19
COL6A1-205ENST00000492851 HMGN5P82970 282 aaKnown RBP13.85□□□□□ -0.19
COL6A1-205ENST00000492851 LLGL2Q6P1M3 1020 aa13.85□□□□□ -0.19
COL6A1-205ENST00000492851 SYCE2Q6PIF2 218 aa13.85□□□□□ -0.19
COL6A1-205ENST00000492851 AGMOQ6ZNB7 445 aa13.85□□□□□ -0.19
COL6A1-205ENST00000492851 MCPH1Q8NEM0 835 aa13.85□□□□□ -0.19
COL6A1-205ENST00000492851 C8orf76Q96K31 380 aa13.85□□□□□ -0.19
COL6A1-205ENST00000492851 NACC1Q96RE7 527 aa13.85□□□□□ -0.19
COL6A1-205ENST00000492851 TRIM6Q9C030 488 aaPredicted RBP13.85□□□□□ -0.19
COL6A1-205ENST00000492851 ZBP1Q9H171 429 aa13.85□□□□□ -0.19
COL6A1-205ENST00000492851 FOXP1Q9H334 677 aaPredicted RBP13.85□□□□□ -0.19
COL6A1-205ENST00000492851 MINDY3Q9H8M7 445 aa13.85□□□□□ -0.19
COL6A1-205ENST00000492851 TUFT1Q9NNX1 390 aa13.85□□□□□ -0.19
COL6A1-205ENST00000492851 DPP7Q9UHL4 492 aa13.85□□□□□ -0.19
COL6A1-205ENST00000492851 STK24Q9Y6E0 443 aa13.85□□□□□ -0.19
COL6A1-205ENST00000492851 PLXNA4Q9HCM2 1894 aa13.84□□□□□ -0.19
COL6A1-205ENST00000492851 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.84□□□□□ -0.19
COL6A1-205ENST00000492851 FAM205CA6NFA0 338 aa13.84□□□□□ -0.19
COL6A1-205ENST00000492851 INO80B-WBP1J3KQ70 363 aa13.84□□□□□ -0.19
COL6A1-205ENST00000492851 ZBTB39O15060 712 aa13.84□□□□□ -0.19
COL6A1-205ENST00000492851 JAK2O60674 1132 aa13.84□□□□□ -0.19
COL6A1-205ENST00000492851 LARGE1O95461 756 aa13.84□□□□□ -0.19
COL6A1-205ENST00000492851 MUTP22033 750 aa13.84□□□□□ -0.19
COL6A1-205ENST00000492851 RARRES1P49788 294 aa13.84□□□□□ -0.19
COL6A1-205ENST00000492851 ZXDAP98168 799 aa13.84□□□□□ -0.19
COL6A1-205ENST00000492851 LONRF3Q496Y0 759 aa13.84□□□□□ -0.19
COL6A1-205ENST00000492851 ATAT1Q5SQI0 421 aa13.84□□□□□ -0.19
COL6A1-205ENST00000492851 UBXN11Q5T124 520 aa13.84□□□□□ -0.19
COL6A1-205ENST00000492851 ELMSAN1Q6PJG2 1045 aa13.84□□□□□ -0.19
COL6A1-205ENST00000492851 TRIM67Q6ZTA4 783 aa13.84□□□□□ -0.19
COL6A1-205ENST00000492851 PRRX2Q99811 253 aa13.84□□□□□ -0.19
COL6A1-205ENST00000492851 GBP3Q9H0R5 595 aa13.84□□□□□ -0.19
COL6A1-205ENST00000492851 CSRNP2Q9H175 543 aa13.84□□□□□ -0.19
COL6A1-205ENST00000492851 SH2B1Q9NRF2 756 aaPredicted RBP13.84□□□□□ -0.19
COL6A1-205ENST00000492851 BMP2KQ9NSY1 1161 aaPredicted RBP13.84□□□□□ -0.19
COL6A1-205ENST00000492851 DBR1Q9UK59 544 aaKnown RBP13.84□□□□□ -0.19
COL6A1-205ENST00000492851 GIT1Q9Y2X7 761 aa13.84□□□□□ -0.19
COL6A1-205ENST00000492851 INPPL1O15357 1258 aa13.83□□□□□ -0.2
COL6A1-205ENST00000492851 TSPAN1O60635 241 aa13.83□□□□□ -0.2
COL6A1-205ENST00000492851 CENPBP07199 599 aaPredicted RBP13.83□□□□□ -0.2
COL6A1-205ENST00000492851 MCM7P33993 719 aa13.83□□□□□ -0.2
COL6A1-205ENST00000492851 TRAPPC10P48553 1259 aa13.83□□□□□ -0.2
COL6A1-205ENST00000492851 SLC11A1P49279 550 aa13.83□□□□□ -0.2
COL6A1-205ENST00000492851 RBM10P98175 930 aaKnown RBP13.83□□□□□ -0.2
COL6A1-205ENST00000492851 GNL2Q13823 731 aaKnown RBP13.83□□□□□ -0.2
COL6A1-205ENST00000492851 ZNF280BQ86YH2 543 aa13.83□□□□□ -0.2
COL6A1-205ENST00000492851 FAM184AQ8NB25 1140 aa13.83□□□□□ -0.2
COL6A1-205ENST00000492851 PRIMPOLQ96LW4 560 aa13.83□□□□□ -0.2
COL6A1-205ENST00000492851 POLR3CQ9BUI4 534 aaPredicted RBP13.83□□□□□ -0.2
COL6A1-205ENST00000492851 XPNPEP1Q9NQW7 623 aa13.83□□□□□ -0.2
COL6A1-205ENST00000492851 MRPL17Q9NRX2 175 aaKnown RBP13.83□□□□□ -0.2
COL6A1-205ENST00000492851 DNAJB4Q9UDY4 337 aa13.83□□□□□ -0.2
COL6A1-205ENST00000492851 IPPQ9Y573 584 aa13.83□□□□□ -0.2
COL6A1-205ENST00000492851 WDR81Q562E7 1941 aa13.83□□□□□ -0.2
COL6A1-205ENST00000492851 A0A1B0GUA9 196 aa13.82□□□□□ -0.2
COL6A1-205ENST00000492851 MEIS3P2A8K0S8 358 aa13.82□□□□□ -0.2
COL6A1-205ENST00000492851 NRP1O14786 923 aa13.82□□□□□ -0.2
COL6A1-205ENST00000492851 DTNBO60941 627 aa13.82□□□□□ -0.2
COL6A1-205ENST00000492851 DDHD2O94830 711 aa13.82□□□□□ -0.2
COL6A1-205ENST00000492851 C1RP00736 705 aa13.82□□□□□ -0.2
COL6A1-205ENST00000492851 POMCP01189 267 aa13.82□□□□□ -0.2
COL6A1-205ENST00000492851 ATP2B1P20020 1258 aa13.82□□□□□ -0.2
COL6A1-205ENST00000492851 GLRA2P23416 452 aa13.82□□□□□ -0.2
COL6A1-205ENST00000492851 RPA1P27694 616 aa13.82□□□□□ -0.2
COL6A1-205ENST00000492851 MBTD1Q05BQ5 628 aa13.82□□□□□ -0.2
COL6A1-205ENST00000492851 SIGLEC14Q08ET2 396 aa13.82□□□□□ -0.2
COL6A1-205ENST00000492851 SLC27A1Q6PCB7 646 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms