RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 PFKFB2O60825 505 aa10.2□□□□□ -0.78
HDAC3-212ENST00000492407 ZC3H11AO75152 810 aaKnown RBP eCLIP10.2□□□□□ -0.78
HDAC3-212ENST00000492407 CSDE1O75534 798 aaKnown RBP10.2□□□□□ -0.78
HDAC3-212ENST00000492407 LYPLA2O95372 231 aa10.2□□□□□ -0.78
HDAC3-212ENST00000492407 AVPR2P30518 371 aa10.2□□□□□ -0.78
HDAC3-212ENST00000492407 PBX3P40426 434 aa10.2□□□□□ -0.78
HDAC3-212ENST00000492407 ANAPC15P60006 121 aa10.2□□□□□ -0.78
HDAC3-212ENST00000492407 RNASELQ05823 741 aaKnown RBP10.2□□□□□ -0.78
HDAC3-212ENST00000492407 NCBP1Q09161 790 aaKnown RBP10.2□□□□□ -0.78
HDAC3-212ENST00000492407 ELMSAN1Q6PJG2 1045 aa10.2□□□□□ -0.78
HDAC3-212ENST00000492407 ZBTB33Q86T24 672 aa10.2□□□□□ -0.78
HDAC3-212ENST00000492407 IFNLR1Q8IU57 520 aaPredicted RBP10.2□□□□□ -0.78
HDAC3-212ENST00000492407 GPR65Q8IYL9 337 aa10.2□□□□□ -0.78
HDAC3-212ENST00000492407 PRSS33Q8NF86 280 aa10.2□□□□□ -0.78
HDAC3-212ENST00000492407 PRPF31Q8WWY3 499 aaKnown RBP10.2□□□□□ -0.78
HDAC3-212ENST00000492407 GJA10Q969M2 543 aa10.2□□□□□ -0.78
HDAC3-212ENST00000492407 ZNF668Q96K58 619 aaPredicted RBP10.2□□□□□ -0.78
HDAC3-212ENST00000492407 NLRP4Q96MN2 994 aa10.2□□□□□ -0.78
HDAC3-212ENST00000492407 SLKQ9H2G2 1235 aaPredicted RBP10.2□□□□□ -0.78
HDAC3-212ENST00000492407 C5orf42Q9H799 3197 aa10.2□□□□□ -0.78
HDAC3-212ENST00000492407 MYH9P35579 1960 aaKnown RBP10.19□□□□□ -0.78
HDAC3-212ENST00000492407 LOXHD1Q8IVV2 1947 aa10.19□□□□□ -0.78
HDAC3-212ENST00000492407 ZMYM2Q9UBW7 1377 aa10.19□□□□□ -0.78
HDAC3-212ENST00000492407 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.19□□□□□ -0.78
HDAC3-212ENST00000492407 NT5C1B-RDH14C9J2C7 533 aa10.19□□□□□ -0.78
HDAC3-212ENST00000492407 SLC37A4O43826 429 aa10.19□□□□□ -0.78
HDAC3-212ENST00000492407 MARCH6O60337 910 aa10.19□□□□□ -0.78
HDAC3-212ENST00000492407 CCNT1O60563 726 aaKnown RBP10.19□□□□□ -0.78
HDAC3-212ENST00000492407 LILRB3O75022 631 aa10.19□□□□□ -0.78
HDAC3-212ENST00000492407 XRCC6P12956 609 aaKnown RBP eCLIP10.19□□□□□ -0.78
HDAC3-212ENST00000492407 HOXA11P31270 313 aaPredicted RBP10.19□□□□□ -0.78
HDAC3-212ENST00000492407 YWHABP31946 246 aaKnown RBP10.19□□□□□ -0.78
HDAC3-212ENST00000492407 SLC11A1P49279 550 aa10.19□□□□□ -0.78
HDAC3-212ENST00000492407 NPEPPSP55786 919 aa10.19□□□□□ -0.78
HDAC3-212ENST00000492407 LAMTOR4Q0VGL1 99 aa10.19□□□□□ -0.78
HDAC3-212ENST00000492407 SCRN1Q12765 414 aa10.19□□□□□ -0.78
HDAC3-212ENST00000492407 TFDP1Q14186 410 aa10.19□□□□□ -0.78
HDAC3-212ENST00000492407 IER5LQ5T953 404 aa10.19□□□□□ -0.78
HDAC3-212ENST00000492407 AGMOQ6ZNB7 445 aa10.19□□□□□ -0.78
HDAC3-212ENST00000492407 C15orf39Q6ZRI6 1047 aa10.19□□□□□ -0.78
HDAC3-212ENST00000492407 FERMT3Q86UX7 667 aa10.19□□□□□ -0.78
HDAC3-212ENST00000492407 KREMEN2Q8NCW0 462 aa10.19□□□□□ -0.78
HDAC3-212ENST00000492407 CMASQ8NFW8 434 aaPredicted RBP10.19□□□□□ -0.78
HDAC3-212ENST00000492407 HDAC7Q8WUI4 952 aa10.19□□□□□ -0.78
HDAC3-212ENST00000492407 HAS1Q92839 578 aa10.19□□□□□ -0.78
HDAC3-212ENST00000492407 ACSF2Q96CM8 615 aaPredicted RBP10.19□□□□□ -0.78
HDAC3-212ENST00000492407 FAM193BQ96PV7 902 aaPredicted RBP10.19□□□□□ -0.78
HDAC3-212ENST00000492407 NFKBIZQ9BYH8 718 aa10.19□□□□□ -0.78
HDAC3-212ENST00000492407 POMKQ9H5K3 350 aa10.19□□□□□ -0.78
HDAC3-212ENST00000492407 SFXN1Q9H9B4 322 aa10.19□□□□□ -0.78
HDAC3-212ENST00000492407 RSAD1Q9HA92 442 aa10.19□□□□□ -0.78
HDAC3-212ENST00000492407 FAN1Q9Y2M0 1017 aa10.19□□□□□ -0.78
HDAC3-212ENST00000492407 TECTAO75443 2155 aa10.19□□□□□ -0.78
HDAC3-212ENST00000492407 EVPLQ92817 2033 aa10.19□□□□□ -0.78
HDAC3-212ENST00000492407 TMEM150BA6NC51 233 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 C2CD4DB7Z1M9 353 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 ST18O60284 1047 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 NR1I2O75469 434 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 DGAT1O75907 488 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 PAPLNO95428 1278 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 EFEMP2O95967 443 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 PTMAP06454 111 aaKnown RBP10.18□□□□□ -0.78
HDAC3-212ENST00000492407 PTENP60484 403 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 SPIRE1Q08AE8 756 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 TCF15Q12870 199 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 STK3Q13188 491 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 PTPN14Q15678 1187 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 UBXN11Q5T124 520 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 PLA2G4FQ68DD2 849 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 OTOP3Q7RTS5 596 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 GPR149Q86SP6 731 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 CABP7Q86V35 215 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 TMEM173Q86WV6 379 aaPredicted RBP10.18□□□□□ -0.78
HDAC3-212ENST00000492407 ZNF280BQ86YH2 543 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 KSR1Q8IVT5 923 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 HACE1Q8IYU2 909 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 TDRD5Q8NAT2 981 aaKnown RBP10.18□□□□□ -0.78
HDAC3-212ENST00000492407 LPPQ93052 612 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 AIFM3Q96NN9 605 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 KLHL5Q96PQ7 755 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 HSD17B14Q9BPX1 270 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 PLCD4Q9BRC7 762 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 SH2D3AQ9BRG2 576 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 LXNQ9BS40 222 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 BRMS1Q9HCU9 246 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 MRPL17Q9NRX2 175 aaKnown RBP10.18□□□□□ -0.78
HDAC3-212ENST00000492407 ANKEF1Q9NU02 776 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 DBR1Q9UK59 544 aaKnown RBP10.18□□□□□ -0.78
HDAC3-212ENST00000492407 KCNJ14Q9UNX9 436 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 ZNF318Q5VUA4 2279 aa10.18□□□□□ -0.78
HDAC3-212ENST00000492407 PROB1E7EW31 1015 aa10.17□□□□□ -0.78
HDAC3-212ENST00000492407 NRP1O14786 923 aa10.17□□□□□ -0.78
HDAC3-212ENST00000492407 DDHD2O94830 711 aa10.17□□□□□ -0.78
HDAC3-212ENST00000492407 ERLIN2O94905 339 aa10.17□□□□□ -0.78
HDAC3-212ENST00000492407 SLITRK3O94933 977 aa10.17□□□□□ -0.78
HDAC3-212ENST00000492407 SOD2P04179 222 aa10.17□□□□□ -0.78
HDAC3-212ENST00000492407 SRGAP2CP0DJJ0 459 aa10.17□□□□□ -0.78
HDAC3-212ENST00000492407 ITGA4P13612 1032 aa10.17□□□□□ -0.78
HDAC3-212ENST00000492407 KLRC2P26717 231 aa10.17□□□□□ -0.78
HDAC3-212ENST00000492407 CLCN4P51793 760 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms