RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 LRWD1Q9UFC0 647 aa16.65■□□□□ 0.26
TOM1-215ENST00000491987 FAM50BQ9Y247 325 aa16.65■□□□□ 0.26
TOM1-215ENST00000491987 ARHGEF35A5YM69 484 aa16.64■□□□□ 0.25
TOM1-215ENST00000491987 LRRIQ4A6NIV6 560 aa16.64■□□□□ 0.25
TOM1-215ENST00000491987 MBTPS2O43462 519 aa16.64■□□□□ 0.25
TOM1-215ENST00000491987 GLP2RO95838 553 aa16.64■□□□□ 0.25
TOM1-215ENST00000491987 ALDH7A1P49419 539 aaKnown RBP16.64■□□□□ 0.25
TOM1-215ENST00000491987 RBM10P98175 930 aaKnown RBP16.64■□□□□ 0.25
TOM1-215ENST00000491987 RNASELQ05823 741 aaKnown RBP16.64■□□□□ 0.25
TOM1-215ENST00000491987 PCBP1Q15365 356 aaKnown RBP eCLIP16.64■□□□□ 0.25
TOM1-215ENST00000491987 ECM1Q16610 540 aa16.64■□□□□ 0.25
TOM1-215ENST00000491987 AMHR2Q16671 573 aa16.64■□□□□ 0.25
TOM1-215ENST00000491987 MCPH1Q8NEM0 835 aa16.64■□□□□ 0.25
TOM1-215ENST00000491987 URGCPQ8TCY9 931 aa16.64■□□□□ 0.25
TOM1-215ENST00000491987 NRDE2Q9H7Z3 1164 aa16.64■□□□□ 0.25
TOM1-215ENST00000491987 RSAD1Q9HA92 442 aa16.64■□□□□ 0.25
TOM1-215ENST00000491987 CLEC1BQ9P126 229 aa16.64■□□□□ 0.25
TOM1-215ENST00000491987 CD207Q9UJ71 328 aa16.64■□□□□ 0.25
TOM1-215ENST00000491987 BARX2Q9UMQ3 279 aaPredicted RBP16.64■□□□□ 0.25
TOM1-215ENST00000491987 SMC3Q9UQE7 1217 aa16.64■□□□□ 0.25
TOM1-215ENST00000491987 HIDE1A8MVS5 230 aa16.63■□□□□ 0.25
TOM1-215ENST00000491987 H3BQV1 296 aa16.63■□□□□ 0.25
TOM1-215ENST00000491987 B4GALT5O43286 388 aa16.63■□□□□ 0.25
TOM1-215ENST00000491987 B4GALT3O60512 393 aa16.63■□□□□ 0.25
TOM1-215ENST00000491987 AXLP30530 894 aa16.63■□□□□ 0.25
TOM1-215ENST00000491987 SSTR3P32745 418 aaPredicted RBP16.63■□□□□ 0.25
TOM1-215ENST00000491987 NCBP1Q09161 790 aaKnown RBP16.63■□□□□ 0.25
TOM1-215ENST00000491987 SMAD4Q13485 552 aaKnown RBP16.63■□□□□ 0.25
TOM1-215ENST00000491987 DUSP6Q16828 381 aa16.63■□□□□ 0.25
TOM1-215ENST00000491987 NOTUMQ6P988 496 aa16.63■□□□□ 0.25
TOM1-215ENST00000491987 PADI6Q6TGC4 694 aa16.63■□□□□ 0.25
TOM1-215ENST00000491987 TMC7Q7Z402 723 aa16.63■□□□□ 0.25
TOM1-215ENST00000491987 TMEM173Q86WV6 379 aaPredicted RBP16.63■□□□□ 0.25
TOM1-215ENST00000491987 GJD3Q8N144 294 aa16.63■□□□□ 0.25
TOM1-215ENST00000491987 SMG8Q8ND04 991 aaKnown RBP16.63■□□□□ 0.25
TOM1-215ENST00000491987 VN1R2Q8NFZ6 395 aa16.63■□□□□ 0.25
TOM1-215ENST00000491987 SNX29Q8TEQ0 813 aa16.63■□□□□ 0.25
TOM1-215ENST00000491987 KHSRPQ92945 711 aaKnown RBP eCLIP16.63■□□□□ 0.25
TOM1-215ENST00000491987 CCDC51Q96ER9 411 aa16.63■□□□□ 0.25
TOM1-215ENST00000491987 TMEM169Q96HH4 297 aa16.63■□□□□ 0.25
TOM1-215ENST00000491987 MSLNLQ96KJ4 702 aa16.63■□□□□ 0.25
TOM1-215ENST00000491987 NFKBIZQ9BYH8 718 aa16.63■□□□□ 0.25
TOM1-215ENST00000491987 NGRNQ9NPE2 291 aaKnown RBP16.63■□□□□ 0.25
TOM1-215ENST00000491987 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.63■□□□□ 0.25
TOM1-215ENST00000491987 DNAJB4Q9UDY4 337 aa16.63■□□□□ 0.25
TOM1-215ENST00000491987 IPPQ9Y573 584 aa16.63■□□□□ 0.25
TOM1-215ENST00000491987 CNTNAP2Q9UHC6 1331 aa16.63■□□□□ 0.25
TOM1-215ENST00000491987 PP2D1A8MPX8 630 aa16.62■□□□□ 0.25
TOM1-215ENST00000491987 ITGA4P13612 1032 aa16.62■□□□□ 0.25
TOM1-215ENST00000491987 ARF4P18085 180 aaPredicted RBP16.62■□□□□ 0.25
TOM1-215ENST00000491987 NCLP19338 710 aaKnown RBP16.62■□□□□ 0.25
TOM1-215ENST00000491987 MUTP22033 750 aa16.62■□□□□ 0.25
TOM1-215ENST00000491987 CA8P35219 290 aa16.62■□□□□ 0.25
TOM1-215ENST00000491987 AFF1P51825 1210 aaKnown RBP16.62■□□□□ 0.25
TOM1-215ENST00000491987 SMAD2Q15796 467 aaKnown RBP16.62■□□□□ 0.25
TOM1-215ENST00000491987 CDR2LQ86X02 465 aaPredicted RBP16.62■□□□□ 0.25
TOM1-215ENST00000491987 ZNF280BQ86YH2 543 aa16.62■□□□□ 0.25
TOM1-215ENST00000491987 IGSF22Q8N9C0 903 aa16.62■□□□□ 0.25
TOM1-215ENST00000491987 CNNM3Q8NE01 707 aa16.62■□□□□ 0.25
TOM1-215ENST00000491987 BCL7CQ8WUZ0 217 aaPredicted RBP16.62■□□□□ 0.25
TOM1-215ENST00000491987 CDCA3Q99618 268 aaPredicted RBP16.62■□□□□ 0.25
TOM1-215ENST00000491987 APOL6Q9BWW8 343 aa16.62■□□□□ 0.25
TOM1-215ENST00000491987 RAB34Q9BZG1 259 aa16.62■□□□□ 0.25
TOM1-215ENST00000491987 CSRNP2Q9H175 543 aa16.62■□□□□ 0.25
TOM1-215ENST00000491987 BHMT2Q9H2M3 363 aa16.62■□□□□ 0.25
TOM1-215ENST00000491987 RNF39Q9H2S5 420 aa16.62■□□□□ 0.25
TOM1-215ENST00000491987 KIAA1024Q9UPX6 916 aa16.62■□□□□ 0.25
TOM1-215ENST00000491987 HES2Q9Y543 173 aa16.62■□□□□ 0.25
TOM1-215ENST00000491987 LAD1O00515 517 aa16.61■□□□□ 0.25
TOM1-215ENST00000491987 DDHD2O94830 711 aa16.61■□□□□ 0.25
TOM1-215ENST00000491987 POMCP01189 267 aa16.61■□□□□ 0.25
TOM1-215ENST00000491987 GALTP07902 379 aa16.61■□□□□ 0.25
TOM1-215ENST00000491987 CYP11B2P19099 503 aa16.61■□□□□ 0.25
TOM1-215ENST00000491987 SLC11A1P49279 550 aa16.61■□□□□ 0.25
TOM1-215ENST00000491987 PDIA5Q14554 519 aa16.61■□□□□ 0.25
TOM1-215ENST00000491987 SMC1AQ14683 1233 aaKnown RBP16.61■□□□□ 0.25
TOM1-215ENST00000491987 IL17AQ16552 155 aa16.61■□□□□ 0.25
TOM1-215ENST00000491987 RILPL1Q5EBL4 403 aa16.61■□□□□ 0.25
TOM1-215ENST00000491987 LLGL2Q6P1M3 1020 aa16.61■□□□□ 0.25
TOM1-215ENST00000491987 ZBTB8OSQ8IWT0 167 aa16.61■□□□□ 0.25
TOM1-215ENST00000491987 BSNDQ8WZ55 320 aa16.61■□□□□ 0.25
TOM1-215ENST00000491987 TRIM6Q9C030 488 aaPredicted RBP16.61■□□□□ 0.25
TOM1-215ENST00000491987 NXF3Q9H4D5 531 aaKnown RBP16.61■□□□□ 0.25
TOM1-215ENST00000491987 EPHX3Q9H6B9 360 aa16.61■□□□□ 0.25
TOM1-215ENST00000491987 DDX19AQ9NUU7 478 aaKnown RBP16.61■□□□□ 0.25
TOM1-215ENST00000491987 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.61■□□□□ 0.25
TOM1-215ENST00000491987 BDP1A6H8Y1 2624 aa16.6■□□□□ 0.25
TOM1-215ENST00000491987 FSD2A1L4K1 749 aa16.6■□□□□ 0.25
TOM1-215ENST00000491987 NPTXRO95502 500 aa16.6■□□□□ 0.25
TOM1-215ENST00000491987 MLH1P40692 756 aa16.6■□□□□ 0.25
TOM1-215ENST00000491987 PRPHP41219 470 aa16.6■□□□□ 0.25
TOM1-215ENST00000491987 ZP2Q05996 745 aa16.6■□□□□ 0.25
TOM1-215ENST00000491987 COASYQ13057 564 aa16.6■□□□□ 0.25
TOM1-215ENST00000491987 CDCA2Q69YH5 1023 aaPredicted RBP16.6■□□□□ 0.25
TOM1-215ENST00000491987 DTHD1Q6ZMT9 781 aa16.6■□□□□ 0.25
TOM1-215ENST00000491987 SMRP1Q8NCR6 262 aa16.6■□□□□ 0.25
TOM1-215ENST00000491987 AUTS2Q8WXX7 1259 aa16.6■□□□□ 0.25
TOM1-215ENST00000491987 IGSF21Q96ID5 467 aa16.6■□□□□ 0.25
TOM1-215ENST00000491987 FAM193BQ96PV7 902 aaPredicted RBP16.6■□□□□ 0.25
TOM1-215ENST00000491987 POLD4Q9HCU8 107 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms