RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 ADGRA3Q8IWK6 1321 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 SYNGAP1Q96PV0 1343 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 MAGEB2O15479 319 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 TMCC1O94876 653 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 GGPS1O95749 300 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 FAM200BP0CF97 657 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 SLC5A1P13866 664 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 POLD1P28340 1107 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 ORC2Q13416 577 aaPredicted RBP6.91□□□□□ -1.3
CCDC6-202ENST00000491922 RASGRF1Q13972 1273 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 RRP1BQ14684 758 aaKnown RBP6.91□□□□□ -1.3
CCDC6-202ENST00000491922 RCN1Q15293 331 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 KCTD19Q17RG1 926 aaPredicted RBP6.91□□□□□ -1.3
CCDC6-202ENST00000491922 ZNF568Q3ZCX4 644 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 KHDC1Q4VXA5 237 aaKnown RBP6.91□□□□□ -1.3
CCDC6-202ENST00000491922 DCAF12L1Q5VU92 463 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 TRIM42Q8IWZ5 723 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 SMC1BQ8NDV3 1235 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 CTNNBL1Q8WYA6 563 aaPredicted RBP6.91□□□□□ -1.3
CCDC6-202ENST00000491922 PPP1R14BQ96C90 147 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 ZNF184Q99676 751 aaPredicted RBP6.91□□□□□ -1.3
CCDC6-202ENST00000491922 OCEL1Q9H607 264 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 MLXIPLQ9NP71 852 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 DDX43Q9NXZ2 648 aaKnown RBP6.91□□□□□ -1.3
CCDC6-202ENST00000491922 ZNF212Q9UDV6 495 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.91□□□□□ -1.3
CCDC6-202ENST00000491922 BAZ2BQ9UIF8 2168 aaKnown RBP6.9□□□□□ -1.3
CCDC6-202ENST00000491922 MROH5Q6ZUA9 1318 aa6.9□□□□□ -1.3
CCDC6-202ENST00000491922 PASKQ96RG2 1323 aa6.9□□□□□ -1.3
CCDC6-202ENST00000491922 TCEA3O75764 348 aa6.9□□□□□ -1.3
CCDC6-202ENST00000491922 GH1P01241 217 aa6.9□□□□□ -1.3
CCDC6-202ENST00000491922 T-ENOLP0DO92 83 aa6.9□□□□□ -1.3
CCDC6-202ENST00000491922 ALAS1P13196 640 aa6.9□□□□□ -1.3
CCDC6-202ENST00000491922 VEGFAP15692 232 aaPredicted RBP6.9□□□□□ -1.3
CCDC6-202ENST00000491922 CREB1P16220 341 aa6.9□□□□□ -1.3
CCDC6-202ENST00000491922 FGFR2P21802 821 aa6.9□□□□□ -1.3
CCDC6-202ENST00000491922 CDR2Q01850 454 aa6.9□□□□□ -1.3
CCDC6-202ENST00000491922 MAP7Q14244 749 aa6.9□□□□□ -1.3
CCDC6-202ENST00000491922 LIN52Q52LA3 116 aa6.9□□□□□ -1.3
CCDC6-202ENST00000491922 UBAP2Q5T6F2 1119 aaKnown RBP6.9□□□□□ -1.3
CCDC6-202ENST00000491922 DAB2IPQ5VWQ8 1189 aa6.9□□□□□ -1.3
CCDC6-202ENST00000491922 CEP128Q6ZU80 1094 aa6.9□□□□□ -1.3
CCDC6-202ENST00000491922 MIGA1Q8NAN2 632 aa6.9□□□□□ -1.3
CCDC6-202ENST00000491922 RFFLQ8WZ73 363 aa6.9□□□□□ -1.3
CCDC6-202ENST00000491922 GPKOWQ92917 476 aaPredicted RBP eCLIP6.9□□□□□ -1.3
CCDC6-202ENST00000491922 FAM89AQ96GI7 184 aa6.9□□□□□ -1.3
CCDC6-202ENST00000491922 CDK5RAP3Q96JB5 506 aa6.9□□□□□ -1.3
CCDC6-202ENST00000491922 BLOC1S4Q9NUP1 217 aa6.9□□□□□ -1.3
CCDC6-202ENST00000491922 ABCF2Q9UG63 623 aa6.9□□□□□ -1.3
CCDC6-202ENST00000491922 PCDHA3Q9Y5H8 950 aa6.9□□□□□ -1.3
CCDC6-202ENST00000491922 LRP5O75197 1615 aa6.9□□□□□ -1.31
CCDC6-202ENST00000491922 ATP6V1G1O75348 118 aa6.9□□□□□ -1.31
CCDC6-202ENST00000491922 PSMG1O95456 288 aa6.9□□□□□ -1.31
CCDC6-202ENST00000491922 LYNP07948 512 aa6.9□□□□□ -1.31
CCDC6-202ENST00000491922 TMEM253P0C7T8 217 aa6.9□□□□□ -1.31
CCDC6-202ENST00000491922 UCHL3P15374 230 aa6.9□□□□□ -1.31
CCDC6-202ENST00000491922 VCAM1P19320 739 aa6.9□□□□□ -1.31
CCDC6-202ENST00000491922 CTNNA2P26232 953 aa6.9□□□□□ -1.31
CCDC6-202ENST00000491922 COPB2P35606 906 aa6.9□□□□□ -1.31
CCDC6-202ENST00000491922 TECP42680 631 aa6.9□□□□□ -1.31
CCDC6-202ENST00000491922 CDK7P50613 346 aa6.9□□□□□ -1.31
CCDC6-202ENST00000491922 PPATQ06203 517 aa6.9□□□□□ -1.31
CCDC6-202ENST00000491922 GRB10Q13322 594 aa6.9□□□□□ -1.31
CCDC6-202ENST00000491922 MOGSQ13724 837 aa6.9□□□□□ -1.31
CCDC6-202ENST00000491922 MPP2Q14168 576 aa6.9□□□□□ -1.31
CCDC6-202ENST00000491922 ZNF449Q6P9G9 518 aa6.9□□□□□ -1.31
CCDC6-202ENST00000491922 DYMQ7RTS9 669 aa6.9□□□□□ -1.31
CCDC6-202ENST00000491922 KRT25Q7Z3Z0 450 aa6.9□□□□□ -1.31
CCDC6-202ENST00000491922 ADAT2Q7Z6V5 191 aaKnown RBP6.9□□□□□ -1.31
CCDC6-202ENST00000491922 SDR42E1Q8WUS8 393 aa6.9□□□□□ -1.31
CCDC6-202ENST00000491922 C7orf43Q8WVR3 580 aa6.9□□□□□ -1.31
CCDC6-202ENST00000491922 NRG4Q8WWG1 115 aa6.9□□□□□ -1.31
CCDC6-202ENST00000491922 C18orf8Q96DM3 657 aa6.9□□□□□ -1.31
CCDC6-202ENST00000491922 TUBB6Q9BUF5 446 aa6.9□□□□□ -1.31
CCDC6-202ENST00000491922 CDC42EP4Q9H3Q1 356 aaKnown RBP6.9□□□□□ -1.31
CCDC6-202ENST00000491922 GREM2Q9H772 168 aa6.9□□□□□ -1.31
CCDC6-202ENST00000491922 SYNCQ9H7C4 482 aa6.9□□□□□ -1.31
CCDC6-202ENST00000491922 STX18Q9P2W9 335 aaKnown RBP6.9□□□□□ -1.31
CCDC6-202ENST00000491922 LGALS13Q9UHV8 139 aa6.9□□□□□ -1.31
CCDC6-202ENST00000491922 ZNF232Q9UNY5 417 aa6.9□□□□□ -1.31
CCDC6-202ENST00000491922 AXIN2Q9Y2T1 843 aa6.9□□□□□ -1.31
CCDC6-202ENST00000491922 MEGF6O75095 1541 aa6.9□□□□□ -1.31
CCDC6-202ENST00000491922 BAZ2AQ9UIF9 1905 aaKnown RBP6.89□□□□□ -1.31
CCDC6-202ENST00000491922 MAGEB6P1A0A0J9YX57 407 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 CAPN9O14815 690 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 CCNT1O60563 726 aaKnown RBP6.89□□□□□ -1.31
CCDC6-202ENST00000491922 PFDN1O60925 122 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 ZWINTO95229 277 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 FOXN2P32314 431 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 GALCP54803 685 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 KCNH2Q12809 1159 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 CALCOCO2Q13137 446 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 LRRC41Q15345 812 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 SLC45A4Q5BKX6 768 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 CCDC137Q6PK04 289 aaKnown RBP6.89□□□□□ -1.31
CCDC6-202ENST00000491922 RGS9BPQ6ZS82 235 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 FAM47EQ6ZV65 393 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 TOM1L2Q6ZVM7 507 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 HS2ST1Q7LGA3 356 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 CCDC25Q86WR0 208 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms