RNA–Protein interactions for RNA: ENST00000491915.1

COL6A4P1-203, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 5

Gene COL6A4P1, Length 1,251 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-203ENST00000491915 UBE3AQ05086 875 aa9.89□□□□□ -0.83
COL6A4P1-203ENST00000491915 NOMO2Q5JPE7 1267 aa9.89□□□□□ -0.83
COL6A4P1-203ENST00000491915 LRRC43Q8N309 656 aa9.89□□□□□ -0.83
COL6A4P1-203ENST00000491915 EFHBQ8N7U6 833 aa9.89□□□□□ -0.83
COL6A4P1-203ENST00000491915 IGSF22Q8N9C0 903 aa9.89□□□□□ -0.83
COL6A4P1-203ENST00000491915 ERMNQ8TAM6 284 aa9.89□□□□□ -0.83
COL6A4P1-203ENST00000491915 BCL7CQ8WUZ0 217 aaPredicted RBP9.89□□□□□ -0.83
COL6A4P1-203ENST00000491915 UPF2Q9HAU5 1272 aaKnown RBP9.89□□□□□ -0.83
COL6A4P1-203ENST00000491915 DNAJB4Q9UDY4 337 aa9.89□□□□□ -0.83
COL6A4P1-203ENST00000491915 KIAA1024Q9UPX6 916 aa9.89□□□□□ -0.83
COL6A4P1-203ENST00000491915 SMC3Q9UQE7 1217 aa9.89□□□□□ -0.83
COL6A4P1-203ENST00000491915 INPP5FQ9Y2H2 1132 aa9.89□□□□□ -0.83
COL6A4P1-203ENST00000491915 HES2Q9Y543 173 aa9.89□□□□□ -0.83
COL6A4P1-203ENST00000491915 PLXNA4Q9HCM2 1894 aa9.89□□□□□ -0.83
COL6A4P1-203ENST00000491915 SPTBN5Q9NRC6 3674 aaKnown RBP9.88□□□□□ -0.83
COL6A4P1-203ENST00000491915 E9PMD0 336 aa9.88□□□□□ -0.83
COL6A4P1-203ENST00000491915 POMCP01189 267 aa9.88□□□□□ -0.83
COL6A4P1-203ENST00000491915 EDN1P05305 212 aa9.88□□□□□ -0.83
COL6A4P1-203ENST00000491915 SKIP12755 728 aa9.88□□□□□ -0.83
COL6A4P1-203ENST00000491915 NCLP19338 710 aaKnown RBP9.88□□□□□ -0.83
COL6A4P1-203ENST00000491915 MCM2P49736 904 aa9.88□□□□□ -0.83
COL6A4P1-203ENST00000491915 CUL4AQ13619 759 aa9.88□□□□□ -0.83
COL6A4P1-203ENST00000491915 KCNC3Q14003 757 aa9.88□□□□□ -0.83
COL6A4P1-203ENST00000491915 TFDP1Q14186 410 aa9.88□□□□□ -0.83
COL6A4P1-203ENST00000491915 PLPP4Q5VZY2 271 aa9.88□□□□□ -0.83
COL6A4P1-203ENST00000491915 LARP1BQ659C4 914 aaKnown RBP9.88□□□□□ -0.83
COL6A4P1-203ENST00000491915 KCNK18Q7Z418 384 aa9.88□□□□□ -0.83
COL6A4P1-203ENST00000491915 MRPL43Q8N983 215 aaKnown RBP9.88□□□□□ -0.83
COL6A4P1-203ENST00000491915 AUTS2Q8WXX7 1259 aa9.88□□□□□ -0.83
COL6A4P1-203ENST00000491915 PGBD4Q96DM1 585 aa9.88□□□□□ -0.83
COL6A4P1-203ENST00000491915 MSLNLQ96KJ4 702 aa9.88□□□□□ -0.83
COL6A4P1-203ENST00000491915 PNMA5Q96PV4 448 aa9.88□□□□□ -0.83
COL6A4P1-203ENST00000491915 GAD1Q99259 594 aa9.88□□□□□ -0.83
COL6A4P1-203ENST00000491915 VN1R3Q9BXE9 311 aa9.88□□□□□ -0.83
COL6A4P1-203ENST00000491915 NFKBIZQ9BYH8 718 aa9.88□□□□□ -0.83
COL6A4P1-203ENST00000491915 CSRNP2Q9H175 543 aa9.88□□□□□ -0.83
COL6A4P1-203ENST00000491915 CXCL16Q9H2A7 254 aa9.88□□□□□ -0.83
COL6A4P1-203ENST00000491915 BHMT2Q9H2M3 363 aa9.88□□□□□ -0.83
COL6A4P1-203ENST00000491915 FZD8Q9H461 694 aa9.88□□□□□ -0.83
COL6A4P1-203ENST00000491915 TLR9Q9NR96 1032 aa9.88□□□□□ -0.83
COL6A4P1-203ENST00000491915 DDX19AQ9NUU7 478 aaKnown RBP9.88□□□□□ -0.83
COL6A4P1-203ENST00000491915 PUF60Q9UHX1 559 aaKnown RBP9.88□□□□□ -0.83
COL6A4P1-203ENST00000491915 LZTS1Q9Y250 596 aa9.88□□□□□ -0.83
COL6A4P1-203ENST00000491915 IPPQ9Y573 584 aa9.88□□□□□ -0.83
COL6A4P1-203ENST00000491915 A0A1B0GUA9 196 aa9.87□□□□□ -0.83
COL6A4P1-203ENST00000491915 ARHGEF35A5YM69 484 aa9.87□□□□□ -0.83
COL6A4P1-203ENST00000491915 LRRIQ4A6NIV6 560 aa9.87□□□□□ -0.83
COL6A4P1-203ENST00000491915 H3BQV1 296 aa9.87□□□□□ -0.83
COL6A4P1-203ENST00000491915 MBTPS2O43462 519 aa9.87□□□□□ -0.83
COL6A4P1-203ENST00000491915 CXCL14O95715 111 aa9.87□□□□□ -0.83
COL6A4P1-203ENST00000491915 ITGA4P13612 1032 aa9.87□□□□□ -0.83
COL6A4P1-203ENST00000491915 MUTP22033 750 aa9.87□□□□□ -0.83
COL6A4P1-203ENST00000491915 SLC11A1P49279 550 aa9.87□□□□□ -0.83
COL6A4P1-203ENST00000491915 ALDH7A1P49419 539 aaKnown RBP9.87□□□□□ -0.83
COL6A4P1-203ENST00000491915 RAB27AP51159 221 aa9.87□□□□□ -0.83
COL6A4P1-203ENST00000491915 KRT17Q04695 432 aa9.87□□□□□ -0.83
COL6A4P1-203ENST00000491915 DUSP6Q16828 381 aa9.87□□□□□ -0.83
COL6A4P1-203ENST00000491915 CSPP1Q1MSJ5 1256 aa9.87□□□□□ -0.83
COL6A4P1-203ENST00000491915 PUS10Q3MIT2 529 aaKnown RBP9.87□□□□□ -0.83
COL6A4P1-203ENST00000491915 GLB1LQ6UWU2 654 aa9.87□□□□□ -0.83
COL6A4P1-203ENST00000491915 DTHD1Q6ZMT9 781 aa9.87□□□□□ -0.83
COL6A4P1-203ENST00000491915 GSTCDQ8NEC7 633 aa9.87□□□□□ -0.83
COL6A4P1-203ENST00000491915 IGSF21Q96ID5 467 aa9.87□□□□□ -0.83
COL6A4P1-203ENST00000491915 PLIN2Q99541 437 aa9.87□□□□□ -0.83
COL6A4P1-203ENST00000491915 TCF25Q9BQ70 676 aa9.87□□□□□ -0.83
COL6A4P1-203ENST00000491915 APOL6Q9BWW8 343 aa9.87□□□□□ -0.83
COL6A4P1-203ENST00000491915 GBP3Q9H0R5 595 aa9.87□□□□□ -0.83
COL6A4P1-203ENST00000491915 RSAD1Q9HA92 442 aa9.87□□□□□ -0.83
COL6A4P1-203ENST00000491915 CD207Q9UJ71 328 aa9.87□□□□□ -0.83
COL6A4P1-203ENST00000491915 BARX2Q9UMQ3 279 aaPredicted RBP9.87□□□□□ -0.83
COL6A4P1-203ENST00000491915 VCANP13611 3396 aa9.87□□□□□ -0.83
COL6A4P1-203ENST00000491915 C2orf71A6NGG8 1288 aa9.86□□□□□ -0.83
COL6A4P1-203ENST00000491915 C19orf67A6NJJ6 358 aa9.86□□□□□ -0.83
COL6A4P1-203ENST00000491915 SFI1A8K8P3 1242 aa9.86□□□□□ -0.83
COL6A4P1-203ENST00000491915 NRP1O14786 923 aa9.86□□□□□ -0.83
COL6A4P1-203ENST00000491915 CLASP2O75122 1294 aaKnown RBP9.86□□□□□ -0.83
COL6A4P1-203ENST00000491915 ZC3H11AO75152 810 aaKnown RBP eCLIP9.86□□□□□ -0.83
COL6A4P1-203ENST00000491915 ERLIN2O94905 339 aa9.86□□□□□ -0.83
COL6A4P1-203ENST00000491915 NPTXRO95502 500 aa9.86□□□□□ -0.83
COL6A4P1-203ENST00000491915 EYA4O95677 639 aa9.86□□□□□ -0.83
COL6A4P1-203ENST00000491915 ALDH2P05091 517 aa9.86□□□□□ -0.83
COL6A4P1-203ENST00000491915 AKAP5P24588 427 aa9.86□□□□□ -0.83
COL6A4P1-203ENST00000491915 AXLP30530 894 aa9.86□□□□□ -0.83
COL6A4P1-203ENST00000491915 PRPHP41219 470 aa9.86□□□□□ -0.83
COL6A4P1-203ENST00000491915 NDUFV1P49821 464 aa9.86□□□□□ -0.83
COL6A4P1-203ENST00000491915 ATP2C1P98194 919 aaPredicted RBP9.86□□□□□ -0.83
COL6A4P1-203ENST00000491915 GRIN1Q05586 938 aa9.86□□□□□ -0.83
COL6A4P1-203ENST00000491915 RNASELQ05823 741 aaKnown RBP9.86□□□□□ -0.83
COL6A4P1-203ENST00000491915 SMAD2Q15796 467 aaKnown RBP9.86□□□□□ -0.83
COL6A4P1-203ENST00000491915 FAM187BQ17R55 369 aa9.86□□□□□ -0.83
COL6A4P1-203ENST00000491915 RILPL1Q5EBL4 403 aa9.86□□□□□ -0.83
COL6A4P1-203ENST00000491915 NT5DC1Q5TFE4 455 aa9.86□□□□□ -0.83
COL6A4P1-203ENST00000491915 EEF1DP3Q658K8 133 aa9.86□□□□□ -0.83
COL6A4P1-203ENST00000491915 CDCA2Q69YH5 1023 aaPredicted RBP9.86□□□□□ -0.83
COL6A4P1-203ENST00000491915 PDE12Q6L8Q7 609 aaKnown RBP9.86□□□□□ -0.83
COL6A4P1-203ENST00000491915 KANK3Q6NY19 840 aa9.86□□□□□ -0.83
COL6A4P1-203ENST00000491915 NOTUMQ6P988 496 aa9.86□□□□□ -0.83
COL6A4P1-203ENST00000491915 SYCE2Q6PIF2 218 aa9.86□□□□□ -0.83
COL6A4P1-203ENST00000491915 TMEM184AQ6ZMB5 413 aa9.86□□□□□ -0.83
COL6A4P1-203ENST00000491915 PPP4R3CPQ6ZMV5 832 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms