RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 TPH2Q8IWU9 490 aa9.75□□□□□ -0.85
NUP50-217ENST00000491860 DIS3L2Q8IYB7 885 aaKnown RBP9.75□□□□□ -0.85
NUP50-217ENST00000491860 NSUN7Q8NE18 718 aaKnown RBP9.75□□□□□ -0.85
NUP50-217ENST00000491860 ERMNQ8TAM6 284 aa9.75□□□□□ -0.85
NUP50-217ENST00000491860 OXER1Q8TDS5 423 aa9.75□□□□□ -0.85
NUP50-217ENST00000491860 TNFRSF25Q93038 417 aa9.75□□□□□ -0.85
NUP50-217ENST00000491860 DYDC2Q96IM9 177 aa9.75□□□□□ -0.85
NUP50-217ENST00000491860 RIPOR3Q96MK2 946 aa9.75□□□□□ -0.85
NUP50-217ENST00000491860 LLPHQ9BRT6 129 aaKnown RBP9.75□□□□□ -0.85
NUP50-217ENST00000491860 IRF2BPLQ9H1B7 796 aa9.75□□□□□ -0.85
NUP50-217ENST00000491860 TTC12Q9H892 705 aaPredicted RBP9.75□□□□□ -0.85
NUP50-217ENST00000491860 RSAD1Q9HA92 442 aa9.75□□□□□ -0.85
NUP50-217ENST00000491860 TBC1D13Q9NVG8 400 aa9.75□□□□□ -0.85
NUP50-217ENST00000491860 PCDHB2Q9Y5E7 798 aa9.75□□□□□ -0.85
NUP50-217ENST00000491860 STK24Q9Y6E0 443 aa9.75□□□□□ -0.85
NUP50-217ENST00000491860 TMEM150BA6NC51 233 aa9.74□□□□□ -0.85
NUP50-217ENST00000491860 RBAK-RBAKDNI3L0D1 243 aa9.74□□□□□ -0.85
NUP50-217ENST00000491860 CSDE1O75534 798 aaKnown RBP9.74□□□□□ -0.85
NUP50-217ENST00000491860 OFD1O75665 1012 aa9.74□□□□□ -0.85
NUP50-217ENST00000491860 CXCL14O95715 111 aa9.74□□□□□ -0.85
NUP50-217ENST00000491860 ALDH2P05091 517 aa9.74□□□□□ -0.85
NUP50-217ENST00000491860 SRGAP2CP0DJJ0 459 aa9.74□□□□□ -0.85
NUP50-217ENST00000491860 CTSAP10619 480 aa9.74□□□□□ -0.85
NUP50-217ENST00000491860 FDPSP14324 419 aaKnown RBP9.74□□□□□ -0.85
NUP50-217ENST00000491860 MUTP22033 750 aa9.74□□□□□ -0.85
NUP50-217ENST00000491860 PTENP60484 403 aa9.74□□□□□ -0.85
NUP50-217ENST00000491860 HMGN5P82970 282 aaKnown RBP9.74□□□□□ -0.85
NUP50-217ENST00000491860 TCF15Q12870 199 aa9.74□□□□□ -0.85
NUP50-217ENST00000491860 NR5A1Q13285 461 aa9.74□□□□□ -0.85
NUP50-217ENST00000491860 KSR1Q8IVT5 923 aa9.74□□□□□ -0.85
NUP50-217ENST00000491860 VPS52Q8N1B4 723 aa9.74□□□□□ -0.85
NUP50-217ENST00000491860 FBXL6Q8N531 539 aa9.74□□□□□ -0.85
NUP50-217ENST00000491860 RNF149Q8NC42 400 aa9.74□□□□□ -0.85
NUP50-217ENST00000491860 MCPH1Q8NEM0 835 aa9.74□□□□□ -0.85
NUP50-217ENST00000491860 TMEM143Q96AN5 459 aa9.74□□□□□ -0.85
NUP50-217ENST00000491860 PBXIP1Q96AQ6 731 aa9.74□□□□□ -0.85
NUP50-217ENST00000491860 IGSF21Q96ID5 467 aa9.74□□□□□ -0.85
NUP50-217ENST00000491860 PRIMPOLQ96LW4 560 aa9.74□□□□□ -0.85
NUP50-217ENST00000491860 ZSCAN31Q96LW9 406 aaPredicted RBP9.74□□□□□ -0.85
NUP50-217ENST00000491860 HSD17B14Q9BPX1 270 aa9.74□□□□□ -0.85
NUP50-217ENST00000491860 EIF2AK1Q9BQI3 630 aaKnown RBP9.74□□□□□ -0.85
NUP50-217ENST00000491860 SH2D3AQ9BRG2 576 aa9.74□□□□□ -0.85
NUP50-217ENST00000491860 EMILIN2Q9BXX0 1053 aa9.74□□□□□ -0.85
NUP50-217ENST00000491860 ZBP1Q9H171 429 aa9.74□□□□□ -0.85
NUP50-217ENST00000491860 SH2B1Q9NRF2 756 aaPredicted RBP9.74□□□□□ -0.85
NUP50-217ENST00000491860 LIMCH1Q9UPQ0 1083 aa9.74□□□□□ -0.85
NUP50-217ENST00000491860 HCFC2Q9Y5Z7 792 aa9.74□□□□□ -0.85
NUP50-217ENST00000491860 C2orf71A6NGG8 1288 aa9.73□□□□□ -0.85
NUP50-217ENST00000491860 HIDE1A8MVS5 230 aa9.73□□□□□ -0.85
NUP50-217ENST00000491860 BTBD18B2RXH4 712 aa9.73□□□□□ -0.85
NUP50-217ENST00000491860 C1RP00736 705 aa9.73□□□□□ -0.85
NUP50-217ENST00000491860 GALTP07902 379 aa9.73□□□□□ -0.85
NUP50-217ENST00000491860 ITGA4P13612 1032 aa9.73□□□□□ -0.85
NUP50-217ENST00000491860 CA8P35219 290 aa9.73□□□□□ -0.85
NUP50-217ENST00000491860 TXKP42681 527 aa9.73□□□□□ -0.85
NUP50-217ENST00000491860 TRAPPC10P48553 1259 aa9.73□□□□□ -0.85
NUP50-217ENST00000491860 NUBP1P53384 320 aa9.73□□□□□ -0.85
NUP50-217ENST00000491860 ZXDAP98168 799 aa9.73□□□□□ -0.85
NUP50-217ENST00000491860 CYP4A11Q02928 519 aa9.73□□□□□ -0.85
NUP50-217ENST00000491860 CTTNQ14247 550 aaKnown RBP9.73□□□□□ -0.85
NUP50-217ENST00000491860 IER5LQ5T953 404 aa9.73□□□□□ -0.85
NUP50-217ENST00000491860 HAUS3Q68CZ6 603 aa9.73□□□□□ -0.85
NUP50-217ENST00000491860 SUGP1Q8IWZ8 645 aaKnown RBP9.73□□□□□ -0.85
NUP50-217ENST00000491860 NECAB1Q8N987 351 aa9.73□□□□□ -0.85
NUP50-217ENST00000491860 VN1R2Q8NFZ6 395 aa9.73□□□□□ -0.85
NUP50-217ENST00000491860 TRIM6Q9C030 488 aaPredicted RBP9.73□□□□□ -0.85
NUP50-217ENST00000491860 C2orf40Q9H1Z8 148 aa9.73□□□□□ -0.85
NUP50-217ENST00000491860 S1PR5Q9H228 398 aa9.73□□□□□ -0.85
NUP50-217ENST00000491860 ADAM7Q9H2U9 754 aa9.73□□□□□ -0.85
NUP50-217ENST00000491860 FOXP1Q9H334 677 aaPredicted RBP9.73□□□□□ -0.85
NUP50-217ENST00000491860 NRDE2Q9H7Z3 1164 aa9.73□□□□□ -0.85
NUP50-217ENST00000491860 TUFT1Q9NNX1 390 aa9.73□□□□□ -0.85
NUP50-217ENST00000491860 RGL1Q9NZL6 768 aa9.73□□□□□ -0.85
NUP50-217ENST00000491860 WRAP73Q9P2S5 460 aaPredicted RBP9.73□□□□□ -0.85
NUP50-217ENST00000491860 HCSTQ9UBK5 93 aa9.73□□□□□ -0.85
NUP50-217ENST00000491860 DBR1Q9UK59 544 aaKnown RBP9.73□□□□□ -0.85
NUP50-217ENST00000491860 INPP5FQ9Y2H2 1132 aa9.73□□□□□ -0.85
NUP50-217ENST00000491860 FAN1Q9Y2M0 1017 aa9.73□□□□□ -0.85
NUP50-217ENST00000491860 KIF3AQ9Y496 699 aa9.73□□□□□ -0.85
NUP50-217ENST00000491860 PCDHGC5Q9Y5F6 944 aa9.73□□□□□ -0.85
NUP50-217ENST00000491860 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.72□□□□□ -0.85
NUP50-217ENST00000491860 PROB1E7EW31 1015 aa9.72□□□□□ -0.85
NUP50-217ENST00000491860 INO80B-WBP1J3KQ70 363 aa9.72□□□□□ -0.85
NUP50-217ENST00000491860 INPPL1O15357 1258 aa9.72□□□□□ -0.85
NUP50-217ENST00000491860 GFRA3O60609 400 aa9.72□□□□□ -0.85
NUP50-217ENST00000491860 CLASP2O75122 1294 aaKnown RBP9.72□□□□□ -0.85
NUP50-217ENST00000491860 CENPBP07199 599 aaPredicted RBP9.72□□□□□ -0.85
NUP50-217ENST00000491860 HOXA11P31270 313 aaPredicted RBP9.72□□□□□ -0.85
NUP50-217ENST00000491860 ARL2P36404 184 aa9.72□□□□□ -0.85
NUP50-217ENST00000491860 PBX3P40426 434 aa9.72□□□□□ -0.85
NUP50-217ENST00000491860 RARRES1P49788 294 aa9.72□□□□□ -0.85
NUP50-217ENST00000491860 CREMQ03060 361 aa9.72□□□□□ -0.85
NUP50-217ENST00000491860 SIGLEC14Q08ET2 396 aa9.72□□□□□ -0.85
NUP50-217ENST00000491860 GNL2Q13823 731 aaKnown RBP9.72□□□□□ -0.85
NUP50-217ENST00000491860 EARS2Q5JPH6 523 aaKnown RBP9.72□□□□□ -0.85
NUP50-217ENST00000491860 ATAT1Q5SQI0 421 aa9.72□□□□□ -0.85
NUP50-217ENST00000491860 LLGL2Q6P1M3 1020 aa9.72□□□□□ -0.85
NUP50-217ENST00000491860 SYCE2Q6PIF2 218 aa9.72□□□□□ -0.85
NUP50-217ENST00000491860 CYP26C1Q6V0L0 522 aa9.72□□□□□ -0.85
NUP50-217ENST00000491860 AGMOQ6ZNB7 445 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms