RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 SFPQP23246 707 aaKnown RBP eCLIP9.94□□□□□ -0.82
HDAC3-211ENST00000491581 GLRA2P23416 452 aa9.94□□□□□ -0.82
HDAC3-211ENST00000491581 AKAP5P24588 427 aa9.94□□□□□ -0.82
HDAC3-211ENST00000491581 DNM2P50570 870 aa9.94□□□□□ -0.82
HDAC3-211ENST00000491581 PUS10Q3MIT2 529 aaKnown RBP9.94□□□□□ -0.82
HDAC3-211ENST00000491581 C8orf34Q49A92 452 aa9.94□□□□□ -0.82
HDAC3-211ENST00000491581 NOMO2Q5JPE7 1267 aa9.94□□□□□ -0.82
HDAC3-211ENST00000491581 ODR4Q5SWX8 454 aa9.94□□□□□ -0.82
HDAC3-211ENST00000491581 RARS2Q5T160 578 aaKnown RBP9.94□□□□□ -0.82
HDAC3-211ENST00000491581 IER5LQ5T953 404 aa9.94□□□□□ -0.82
HDAC3-211ENST00000491581 POTEGQ6S5H5 508 aa9.94□□□□□ -0.82
HDAC3-211ENST00000491581 ZNF410Q86VK4 478 aa9.94□□□□□ -0.82
HDAC3-211ENST00000491581 C4orf19Q8IY42 314 aa9.94□□□□□ -0.82
HDAC3-211ENST00000491581 TMEM130Q8N3G9 435 aa9.94□□□□□ -0.82
HDAC3-211ENST00000491581 SLC7A3Q8WY07 619 aa9.94□□□□□ -0.82
HDAC3-211ENST00000491581 BSNDQ8WZ55 320 aa9.94□□□□□ -0.82
HDAC3-211ENST00000491581 SUSD6Q92537 303 aa9.94□□□□□ -0.82
HDAC3-211ENST00000491581 MTMR9Q96QG7 549 aa9.94□□□□□ -0.82
HDAC3-211ENST00000491581 MTRQ99707 1265 aa9.94□□□□□ -0.82
HDAC3-211ENST00000491581 HSD17B14Q9BPX1 270 aa9.94□□□□□ -0.82
HDAC3-211ENST00000491581 ZBP1Q9H171 429 aa9.94□□□□□ -0.82
HDAC3-211ENST00000491581 NXF3Q9H4D5 531 aaKnown RBP9.94□□□□□ -0.82
HDAC3-211ENST00000491581 POMKQ9H5K3 350 aa9.94□□□□□ -0.82
HDAC3-211ENST00000491581 TSHZ2Q9NRE2 1034 aa9.94□□□□□ -0.82
HDAC3-211ENST00000491581 MARCH5Q9NX47 278 aa9.94□□□□□ -0.82
HDAC3-211ENST00000491581 PRKAG3Q9UGI9 489 aa9.94□□□□□ -0.82
HDAC3-211ENST00000491581 PCDHA12Q9UN75 941 aa9.94□□□□□ -0.82
HDAC3-211ENST00000491581 PRG3Q9Y2Y8 225 aaPredicted RBP9.94□□□□□ -0.82
HDAC3-211ENST00000491581 WDFY4Q6ZS81 3184 aa9.94□□□□□ -0.82
HDAC3-211ENST00000491581 TRIOO75962 3097 aa9.93□□□□□ -0.82
HDAC3-211ENST00000491581 TECTAO75443 2155 aa9.93□□□□□ -0.82
HDAC3-211ENST00000491581 PP2D1A8MPX8 630 aa9.93□□□□□ -0.82
HDAC3-211ENST00000491581 PRR33A8MZF0 331 aa9.93□□□□□ -0.82
HDAC3-211ENST00000491581 NEMFO60524 1076 aa9.93□□□□□ -0.82
HDAC3-211ENST00000491581 CD2BP2O95400 341 aaKnown RBP9.93□□□□□ -0.82
HDAC3-211ENST00000491581 EOMESO95936 686 aa9.93□□□□□ -0.82
HDAC3-211ENST00000491581 ASGR2P07307 311 aa9.93□□□□□ -0.82
HDAC3-211ENST00000491581 GCFC2P16383 781 aaKnown RBP9.93□□□□□ -0.82
HDAC3-211ENST00000491581 MLH1P40692 756 aa9.93□□□□□ -0.82
HDAC3-211ENST00000491581 RARRES1P49788 294 aa9.93□□□□□ -0.82
HDAC3-211ENST00000491581 UBE3AQ05086 875 aa9.93□□□□□ -0.82
HDAC3-211ENST00000491581 MBTD1Q05BQ5 628 aa9.93□□□□□ -0.82
HDAC3-211ENST00000491581 AMHR2Q16671 573 aa9.93□□□□□ -0.82
HDAC3-211ENST00000491581 GLYCTKQ8IVS8 523 aa9.93□□□□□ -0.82
HDAC3-211ENST00000491581 MRPL43Q8N983 215 aaKnown RBP9.93□□□□□ -0.82
HDAC3-211ENST00000491581 PSPC1Q8WXF1 523 aaKnown RBP9.93□□□□□ -0.82
HDAC3-211ENST00000491581 FAM122AQ96E09 287 aa9.93□□□□□ -0.82
HDAC3-211ENST00000491581 IGSF21Q96ID5 467 aa9.93□□□□□ -0.82
HDAC3-211ENST00000491581 GAD1Q99259 594 aa9.93□□□□□ -0.82
HDAC3-211ENST00000491581 PAAF1Q9BRP4 392 aa9.93□□□□□ -0.82
HDAC3-211ENST00000491581 KIFC3Q9BVG8 833 aa9.93□□□□□ -0.82
HDAC3-211ENST00000491581 POLR3FQ9H1D9 316 aaPredicted RBP9.93□□□□□ -0.82
HDAC3-211ENST00000491581 ZSWIM4Q9H7M6 989 aa9.93□□□□□ -0.82
HDAC3-211ENST00000491581 DACT1Q9NYF0 836 aa9.93□□□□□ -0.82
HDAC3-211ENST00000491581 IPPQ9Y573 584 aa9.93□□□□□ -0.82
HDAC3-211ENST00000491581 TRIP11Q15643 1979 aa9.92□□□□□ -0.82
HDAC3-211ENST00000491581 C2CD4DB7Z1M9 353 aa9.92□□□□□ -0.82
HDAC3-211ENST00000491581 INO80B-WBP1J3KQ70 363 aa9.92□□□□□ -0.82
HDAC3-211ENST00000491581 NRP1O14786 923 aa9.92□□□□□ -0.82
HDAC3-211ENST00000491581 TBX3O15119 743 aa9.92□□□□□ -0.82
HDAC3-211ENST00000491581 NCK2O43639 380 aa9.92□□□□□ -0.82
HDAC3-211ENST00000491581 SPATA31D3P0C874 917 aa9.92□□□□□ -0.82
HDAC3-211ENST00000491581 XBP1P17861 261 aa9.92□□□□□ -0.82
HDAC3-211ENST00000491581 ARF4P18085 180 aaPredicted RBP9.92□□□□□ -0.82
HDAC3-211ENST00000491581 LIG1P18858 919 aa9.92□□□□□ -0.82
HDAC3-211ENST00000491581 ARL2P36404 184 aa9.92□□□□□ -0.82
HDAC3-211ENST00000491581 ALDH7A1P49419 539 aaKnown RBP9.92□□□□□ -0.82
HDAC3-211ENST00000491581 SCNN1GP51170 649 aa9.92□□□□□ -0.82
HDAC3-211ENST00000491581 VCPP55072 806 aaKnown RBP9.92□□□□□ -0.82
HDAC3-211ENST00000491581 RNASELQ05823 741 aaKnown RBP9.92□□□□□ -0.82
HDAC3-211ENST00000491581 SMC1AQ14683 1233 aaKnown RBP9.92□□□□□ -0.82
HDAC3-211ENST00000491581 CBX2Q14781 532 aaPredicted RBP9.92□□□□□ -0.82
HDAC3-211ENST00000491581 ANKRD1Q15327 319 aa9.92□□□□□ -0.82
HDAC3-211ENST00000491581 CSPP1Q1MSJ5 1256 aa9.92□□□□□ -0.82
HDAC3-211ENST00000491581 HERC4Q5GLZ8 1057 aaPredicted RBP9.92□□□□□ -0.82
HDAC3-211ENST00000491581 GLB1LQ6UWU2 654 aa9.92□□□□□ -0.82
HDAC3-211ENST00000491581 TMC5Q6UXY8 1006 aa9.92□□□□□ -0.82
HDAC3-211ENST00000491581 SPATA31D4Q6ZUB0 917 aa9.92□□□□□ -0.82
HDAC3-211ENST00000491581 CATSPER3Q86XQ3 398 aa9.92□□□□□ -0.82
HDAC3-211ENST00000491581 SLC22A17Q8WUG5 538 aa9.92□□□□□ -0.82
HDAC3-211ENST00000491581 TMEM169Q96HH4 297 aa9.92□□□□□ -0.82
HDAC3-211ENST00000491581 PHF7Q9BWX1 381 aaPredicted RBP9.92□□□□□ -0.82
HDAC3-211ENST00000491581 INO80BQ9C086 356 aaPredicted RBP9.92□□□□□ -0.82
HDAC3-211ENST00000491581 RSAD1Q9HA92 442 aa9.92□□□□□ -0.82
HDAC3-211ENST00000491581 CHST12Q9NRB3 414 aa9.92□□□□□ -0.82
HDAC3-211ENST00000491581 LZTS1Q9Y250 596 aa9.92□□□□□ -0.82
HDAC3-211ENST00000491581 NCOR1O75376 2440 aa9.91□□□□□ -0.82
HDAC3-211ENST00000491581 HOXA2O43364 376 aa9.91□□□□□ -0.82
HDAC3-211ENST00000491581 ZNF623O75123 536 aa9.91□□□□□ -0.82
HDAC3-211ENST00000491581 BAG4O95429 457 aaKnown RBP9.91□□□□□ -0.82
HDAC3-211ENST00000491581 NPTXRO95502 500 aa9.91□□□□□ -0.82
HDAC3-211ENST00000491581 CNPP09543 421 aaKnown RBP9.91□□□□□ -0.82
HDAC3-211ENST00000491581 ALADP13716 330 aa9.91□□□□□ -0.82
HDAC3-211ENST00000491581 RPL17P18621 184 aaKnown RBP9.91□□□□□ -0.82
HDAC3-211ENST00000491581 CDC25AP30304 524 aa9.91□□□□□ -0.82
HDAC3-211ENST00000491581 RFC5P40937 340 aa9.91□□□□□ -0.82
HDAC3-211ENST00000491581 OR1G1P47890 313 aa9.91□□□□□ -0.82
HDAC3-211ENST00000491581 TOB1P50616 345 aaPredicted RBP9.91□□□□□ -0.82
HDAC3-211ENST00000491581 PTENP60484 403 aa9.91□□□□□ -0.82
HDAC3-211ENST00000491581 KRT17Q04695 432 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms