RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 CAPSQ13938 189 aa9.19□□□□□ -0.94
LSM2-213ENST00000491421 SMC1AQ14683 1233 aaKnown RBP9.19□□□□□ -0.94
LSM2-213ENST00000491421 BMS1Q14692 1282 aaKnown RBP9.19□□□□□ -0.94
LSM2-213ENST00000491421 PCBP1Q15365 356 aaKnown RBP eCLIP9.19□□□□□ -0.94
LSM2-213ENST00000491421 ZNF174Q15697 407 aa9.19□□□□□ -0.94
LSM2-213ENST00000491421 NOSTRINQ8IVI9 506 aa9.19□□□□□ -0.94
LSM2-213ENST00000491421 FBXO18Q8NFZ0 1043 aa9.19□□□□□ -0.94
LSM2-213ENST00000491421 VN1R2Q8NFZ6 395 aa9.19□□□□□ -0.94
LSM2-213ENST00000491421 URGCPQ8TCY9 931 aa9.19□□□□□ -0.94
LSM2-213ENST00000491421 ASAP3Q8TDY4 903 aa9.19□□□□□ -0.94
LSM2-213ENST00000491421 PIGOQ8TEQ8 1089 aa9.19□□□□□ -0.94
LSM2-213ENST00000491421 TMEM169Q96HH4 297 aa9.19□□□□□ -0.94
LSM2-213ENST00000491421 LRFN3Q9BTN0 628 aa9.19□□□□□ -0.94
LSM2-213ENST00000491421 GBP3Q9H0R5 595 aa9.19□□□□□ -0.94
LSM2-213ENST00000491421 TUFT1Q9NNX1 390 aa9.19□□□□□ -0.94
LSM2-213ENST00000491421 NOL7Q9UMY1 257 aaKnown RBP9.19□□□□□ -0.94
LSM2-213ENST00000491421 USP15Q9Y4E8 981 aaPredicted RBP9.19□□□□□ -0.94
LSM2-213ENST00000491421 KIAA1671Q9BY89 1806 aa9.19□□□□□ -0.94
LSM2-213ENST00000491421 MYO7AQ13402 2215 aa9.19□□□□□ -0.94
LSM2-213ENST00000491421 A0A087WWV3 80 aa9.18□□□□□ -0.94
LSM2-213ENST00000491421 DCXO43602 365 aa9.18□□□□□ -0.94
LSM2-213ENST00000491421 GPR37L1O60883 481 aa9.18□□□□□ -0.94
LSM2-213ENST00000491421 SPATA31C1P0DKV0 1188 aa9.18□□□□□ -0.94
LSM2-213ENST00000491421 XRCC6P12956 609 aaKnown RBP eCLIP9.18□□□□□ -0.94
LSM2-213ENST00000491421 NCLP19338 710 aaKnown RBP9.18□□□□□ -0.94
LSM2-213ENST00000491421 AXLP30530 894 aa9.18□□□□□ -0.94
LSM2-213ENST00000491421 ARL2P36404 184 aa9.18□□□□□ -0.94
LSM2-213ENST00000491421 TECP42680 631 aa9.18□□□□□ -0.94
LSM2-213ENST00000491421 TRAPPC10P48553 1259 aa9.18□□□□□ -0.94
LSM2-213ENST00000491421 POU5F1BQ06416 359 aa9.18□□□□□ -0.94
LSM2-213ENST00000491421 RABEP1Q15276 862 aa9.18□□□□□ -0.94
LSM2-213ENST00000491421 TTC38Q5R3I4 469 aa9.18□□□□□ -0.94
LSM2-213ENST00000491421 UBXN11Q5T124 520 aa9.18□□□□□ -0.94
LSM2-213ENST00000491421 LLGL2Q6P1M3 1020 aa9.18□□□□□ -0.94
LSM2-213ENST00000491421 NOTUMQ6P988 496 aa9.18□□□□□ -0.94
LSM2-213ENST00000491421 AGMOQ6ZNB7 445 aa9.18□□□□□ -0.94
LSM2-213ENST00000491421 MRPL10Q7Z7H8 261 aaKnown RBP9.18□□□□□ -0.94
LSM2-213ENST00000491421 TMEM173Q86WV6 379 aaPredicted RBP9.18□□□□□ -0.94
LSM2-213ENST00000491421 CATSPER3Q86XQ3 398 aa9.18□□□□□ -0.94
LSM2-213ENST00000491421 VPS52Q8N1B4 723 aa9.18□□□□□ -0.94
LSM2-213ENST00000491421 MRPL43Q8N983 215 aaKnown RBP9.18□□□□□ -0.94
LSM2-213ENST00000491421 ERMNQ8TAM6 284 aa9.18□□□□□ -0.94
LSM2-213ENST00000491421 CCDC51Q96ER9 411 aa9.18□□□□□ -0.94
LSM2-213ENST00000491421 NACC1Q96RE7 527 aa9.18□□□□□ -0.94
LSM2-213ENST00000491421 POLR3FQ9H1D9 316 aaPredicted RBP9.18□□□□□ -0.94
LSM2-213ENST00000491421 NRDE2Q9H7Z3 1164 aa9.18□□□□□ -0.94
LSM2-213ENST00000491421 RSAD1Q9HA92 442 aa9.18□□□□□ -0.94
LSM2-213ENST00000491421 CNTNAP2Q9UHC6 1331 aa9.18□□□□□ -0.94
LSM2-213ENST00000491421 RAPGEFL1Q9UHV5 662 aa9.18□□□□□ -0.94
LSM2-213ENST00000491421 FNDC1Q4ZHG4 1894 aaPredicted RBP9.17□□□□□ -0.94
LSM2-213ENST00000491421 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.17□□□□□ -0.94
LSM2-213ENST00000491421 C2orf71A6NGG8 1288 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 ST18O60284 1047 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 MED24O75448 989 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 POMCP01189 267 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 GALTP07902 379 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 ITGA4P13612 1032 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 GLRA2P23416 452 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 SLC11A1P49279 550 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 MBTD1Q05BQ5 628 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 KCNC3Q14003 757 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 HAUS3Q68CZ6 603 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 ANKRD54Q6NXT1 300 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 POTEGQ6S5H5 508 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 TMEM184AQ6ZMB5 413 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 MAEAQ7L5Y9 396 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 DDX53Q86TM3 631 aaKnown RBP9.17□□□□□ -0.94
LSM2-213ENST00000491421 ZNF280BQ86YH2 543 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 IFNLR1Q8IU57 520 aaPredicted RBP9.17□□□□□ -0.94
LSM2-213ENST00000491421 TMEM87AQ8NBN3 555 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 SMG8Q8ND04 991 aaKnown RBP9.17□□□□□ -0.94
LSM2-213ENST00000491421 CNNM3Q8NE01 707 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 MCPH1Q8NEM0 835 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 BCL7CQ8WUZ0 217 aaPredicted RBP9.17□□□□□ -0.94
LSM2-213ENST00000491421 CASP10Q92851 521 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 IGSF21Q96ID5 467 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 CPB2Q96IY4 423 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 FAM193BQ96PV7 902 aaPredicted RBP9.17□□□□□ -0.94
LSM2-213ENST00000491421 POLR3CQ9BUI4 534 aaPredicted RBP9.17□□□□□ -0.94
LSM2-213ENST00000491421 EIF2AQ9BY44 585 aaKnown RBP9.17□□□□□ -0.94
LSM2-213ENST00000491421 NFKBIZQ9BYH8 718 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 TRIM6Q9C030 488 aaPredicted RBP9.17□□□□□ -0.94
LSM2-213ENST00000491421 ZBP1Q9H171 429 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 CSRNP2Q9H175 543 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 UPF2Q9HAU5 1272 aaKnown RBP9.17□□□□□ -0.94
LSM2-213ENST00000491421 UBN1Q9NPG3 1134 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 C11orf16Q9NQ32 467 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 GPRC5CQ9NQ84 441 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 KANSL3Q9P2N6 904 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 DNAJB4Q9UDY4 337 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 DBR1Q9UK59 544 aaKnown RBP9.17□□□□□ -0.94
LSM2-213ENST00000491421 KIF3AQ9Y496 699 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 IPPQ9Y573 584 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 ATG2AQ2TAZ0 1938 aa9.17□□□□□ -0.94
LSM2-213ENST00000491421 WDR81Q562E7 1941 aa9.16□□□□□ -0.94
LSM2-213ENST00000491421 ARHGEF35A5YM69 484 aa9.16□□□□□ -0.94
LSM2-213ENST00000491421 ARL5CA6NH57 179 aa9.16□□□□□ -0.94
LSM2-213ENST00000491421 LRRIQ4A6NIV6 560 aa9.16□□□□□ -0.94
LSM2-213ENST00000491421 B4GALT5O43286 388 aa9.16□□□□□ -0.94
LSM2-213ENST00000491421 B4GALT3O60512 393 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms