RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 ZBTB33Q86T24 672 aa15.2■□□□□ 0.02
SMPD4-219ENST00000491128 NEK11Q8NG66 645 aa15.2■□□□□ 0.02
SMPD4-219ENST00000491128 MINDY3Q9H8M7 445 aa15.2■□□□□ 0.02
SMPD4-219ENST00000491128 AJAP1Q9UKB5 411 aaPredicted RBP15.2■□□□□ 0.02
SMPD4-219ENST00000491128 SLC16A3O15427 465 aaKnown RBP15.2■□□□□ 0.02
SMPD4-219ENST00000491128 B4GALT5O43286 388 aa15.2■□□□□ 0.02
SMPD4-219ENST00000491128 NAMPTP43490 491 aa15.2■□□□□ 0.02
SMPD4-219ENST00000491128 WNT7BP56706 349 aa15.2■□□□□ 0.02
SMPD4-219ENST00000491128 PPP3CAQ08209 521 aa15.2■□□□□ 0.02
SMPD4-219ENST00000491128 DGKDQ16760 1214 aa15.2■□□□□ 0.02
SMPD4-219ENST00000491128 CACNA2D4Q7Z3S7 1137 aa15.2■□□□□ 0.02
SMPD4-219ENST00000491128 OR8K1Q8NGG5 319 aa15.2■□□□□ 0.02
SMPD4-219ENST00000491128 PSPC1Q8WXF1 523 aaKnown RBP15.2■□□□□ 0.02
SMPD4-219ENST00000491128 ZNF592Q92610 1267 aa15.2■□□□□ 0.02
SMPD4-219ENST00000491128 C17orf75Q9HAS0 396 aa15.2■□□□□ 0.02
SMPD4-219ENST00000491128 RNF186Q9NXI6 227 aa15.2■□□□□ 0.02
SMPD4-219ENST00000491128 STX10O60499 249 aa15.19■□□□□ 0.02
SMPD4-219ENST00000491128 C22orf31O95567 290 aa15.19■□□□□ 0.02
SMPD4-219ENST00000491128 PGK1P00558 417 aa15.19■□□□□ 0.02
SMPD4-219ENST00000491128 IQCF3P0C7M6 154 aa15.19■□□□□ 0.02
SMPD4-219ENST00000491128 DLATP10515 647 aaKnown RBP15.19■□□□□ 0.02
SMPD4-219ENST00000491128 FCGRTP55899 365 aa15.19■□□□□ 0.02
SMPD4-219ENST00000491128 ZNF200P98182 395 aaPredicted RBP15.19■□□□□ 0.02
SMPD4-219ENST00000491128 BFSP1Q12934 665 aa15.19■□□□□ 0.02
SMPD4-219ENST00000491128 STRN3Q13033 797 aa15.19■□□□□ 0.02
SMPD4-219ENST00000491128 SNRNP35Q16560 246 aaKnown RBP15.19■□□□□ 0.02
SMPD4-219ENST00000491128 PPP1R13BQ96KQ4 1090 aa15.19■□□□□ 0.02
SMPD4-219ENST00000491128 SPTLC3Q9NUV7 552 aa15.19■□□□□ 0.02
SMPD4-219ENST00000491128 GCNT4Q9P109 453 aa15.19■□□□□ 0.02
SMPD4-219ENST00000491128 TSKSQ9UJT2 592 aa15.19■□□□□ 0.02
SMPD4-219ENST00000491128 AKT3Q9Y243 479 aa15.19■□□□□ 0.02
SMPD4-219ENST00000491128 INO80B-WBP1J3KQ70 363 aa15.19■□□□□ 0.02
SMPD4-219ENST00000491128 ARHGAP6O43182 974 aa15.19■□□□□ 0.02
SMPD4-219ENST00000491128 NRDCO43847 1150 aa15.19■□□□□ 0.02
SMPD4-219ENST00000491128 MYL3P08590 195 aa15.19■□□□□ 0.02
SMPD4-219ENST00000491128 PON1P27169 355 aa15.19■□□□□ 0.02
SMPD4-219ENST00000491128 ALCAMQ13740 583 aa15.19■□□□□ 0.02
SMPD4-219ENST00000491128 HIC1Q14526 733 aa15.19■□□□□ 0.02
SMPD4-219ENST00000491128 EXOC3L4Q17RC7 722 aa15.19■□□□□ 0.02
SMPD4-219ENST00000491128 KIAA0753Q2KHM9 967 aa15.19■□□□□ 0.02
SMPD4-219ENST00000491128 CCDC112Q8NEF3 446 aa15.19■□□□□ 0.02
SMPD4-219ENST00000491128 EMID1Q96A84 441 aaPredicted RBP15.19■□□□□ 0.02
SMPD4-219ENST00000491128 INO80BQ9C086 356 aaPredicted RBP15.19■□□□□ 0.02
SMPD4-219ENST00000491128 FAM49AQ9H0Q0 323 aaPredicted RBP15.19■□□□□ 0.02
SMPD4-219ENST00000491128 METTL14Q9HCE5 456 aaKnown RBP15.19■□□□□ 0.02
SMPD4-219ENST00000491128 EXOC7Q9UPT5 735 aa15.19■□□□□ 0.02
SMPD4-219ENST00000491128 ADCY3O60266 1144 aa15.18■□□□□ 0.02
SMPD4-219ENST00000491128 FGFR4P22455 802 aa15.18■□□□□ 0.02
SMPD4-219ENST00000491128 VEGFBP49765 207 aa15.18■□□□□ 0.02
SMPD4-219ENST00000491128 RTP1P59025 263 aa15.18■□□□□ 0.02
SMPD4-219ENST00000491128 NLRP11P59045 1033 aaKnown RBP15.18■□□□□ 0.02
SMPD4-219ENST00000491128 PPFIA1Q13136 1202 aa15.18■□□□□ 0.02
SMPD4-219ENST00000491128 C1orf220Q5T0J3 134 aa15.18■□□□□ 0.02
SMPD4-219ENST00000491128 MARCH8Q5T0T0 291 aa15.18■□□□□ 0.02
SMPD4-219ENST00000491128 GOLGA5Q8TBA6 731 aa15.18■□□□□ 0.02
SMPD4-219ENST00000491128 SOCS4Q8WXH5 440 aa15.18■□□□□ 0.02
SMPD4-219ENST00000491128 KAT2BQ92831 832 aa15.18■□□□□ 0.02
SMPD4-219ENST00000491128 HHIPL1Q96JK4 782 aa15.18■□□□□ 0.02
SMPD4-219ENST00000491128 FAM184BQ9ULE4 1060 aa15.18■□□□□ 0.02
SMPD4-219ENST00000491128 FHOD1Q9Y613 1164 aa15.18■□□□□ 0.02
SMPD4-219ENST00000491128 ARID2Q68CP9 1835 aa15.18■□□□□ 0.02
SMPD4-219ENST00000491128 IGKV6-21A0A0C4DH24 114 aa15.18■□□□□ 0.02
SMPD4-219ENST00000491128 FMO5P49326 533 aa15.18■□□□□ 0.02
SMPD4-219ENST00000491128 APLP1P51693 650 aa15.18■□□□□ 0.02
SMPD4-219ENST00000491128 VAMP7P51809 220 aa15.18■□□□□ 0.02
SMPD4-219ENST00000491128 OSTNP61366 133 aa15.18■□□□□ 0.02
SMPD4-219ENST00000491128 TRIM14Q14142 442 aa15.18■□□□□ 0.02
SMPD4-219ENST00000491128 GRIK4Q16099 956 aa15.18■□□□□ 0.02
SMPD4-219ENST00000491128 IER5Q5VY09 327 aa15.18■□□□□ 0.02
SMPD4-219ENST00000491128 SCARA3Q6AZY7 606 aa15.18■□□□□ 0.02
SMPD4-219ENST00000491128 CD99L2Q8TCZ2 262 aa15.18■□□□□ 0.02
SMPD4-219ENST00000491128 BAP1Q92560 729 aa15.18■□□□□ 0.02
SMPD4-219ENST00000491128 DNAJC7Q99615 494 aa15.18■□□□□ 0.02
SMPD4-219ENST00000491128 TCHPQ9BT92 498 aa15.18■□□□□ 0.02
SMPD4-219ENST00000491128 IRX2Q9BZI1 471 aaPredicted RBP15.18■□□□□ 0.02
SMPD4-219ENST00000491128 LZTFL1Q9NQ48 299 aa15.18■□□□□ 0.02
SMPD4-219ENST00000491128 PPP2R2CQ9Y2T4 447 aa15.18■□□□□ 0.02
SMPD4-219ENST00000491128 A0A087WZ62 844 aa15.17■□□□□ 0.02
SMPD4-219ENST00000491128 C6orf222P0C671 652 aaPredicted RBP15.17■□□□□ 0.02
SMPD4-219ENST00000491128 SLC26A2P50443 739 aa15.17■□□□□ 0.02
SMPD4-219ENST00000491128 ZBED6P86452 979 aa15.17■□□□□ 0.02
SMPD4-219ENST00000491128 RAPGEF1Q13905 1077 aa15.17■□□□□ 0.02
SMPD4-219ENST00000491128 SLC9A9Q8IVB4 645 aa15.17■□□□□ 0.02
SMPD4-219ENST00000491128 FDXACB1Q9BRP7 624 aaPredicted RBP15.17■□□□□ 0.02
SMPD4-219ENST00000491128 CREBZFQ9NS37 354 aa15.17■□□□□ 0.02
SMPD4-219ENST00000491128 ZNF215Q9UL58 517 aaPredicted RBP15.17■□□□□ 0.02
SMPD4-219ENST00000491128 KRT13P13646 458 aa15.17■□□□□ 0.02
SMPD4-219ENST00000491128 CYP27A1Q02318 531 aa15.17■□□□□ 0.02
SMPD4-219ENST00000491128 SP3Q02447 781 aa15.17■□□□□ 0.02
SMPD4-219ENST00000491128 MAP2K1Q02750 393 aaPredicted RBP15.17■□□□□ 0.02
SMPD4-219ENST00000491128 PPP2R5AQ15172 486 aa15.17■□□□□ 0.02
SMPD4-219ENST00000491128 NFIL3Q16649 462 aa15.17■□□□□ 0.02
SMPD4-219ENST00000491128 TMEM130Q8N3G9 435 aa15.17■□□□□ 0.02
SMPD4-219ENST00000491128 NUP58Q9BVL2 599 aa15.17■□□□□ 0.02
SMPD4-219ENST00000491128 A6NJR5 290 aa15.16■□□□□ 0.02
SMPD4-219ENST00000491128 TNFSF9P41273 254 aa15.16■□□□□ 0.02
SMPD4-219ENST00000491128 TSR1Q2NL82 804 aaKnown RBP15.16■□□□□ 0.02
SMPD4-219ENST00000491128 BRDTQ58F21 947 aaPredicted RBP15.16■□□□□ 0.02
SMPD4-219ENST00000491128 DPY19L2P1Q6NXN4 242 aa15.16■□□□□ 0.02
SMPD4-219ENST00000491128 MTHFD1LQ6UB35 978 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms