RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 NOC4LQ9BVI4 516 aaKnown RBP20.46■□□□□ 0.87
MCF2L-230ENST00000491028 HIPK3Q9H422 1215 aa20.46■□□□□ 0.87
MCF2L-230ENST00000491028 MINDY3Q9H8M7 445 aa20.46■□□□□ 0.87
MCF2L-230ENST00000491028 ZMYM2Q9UBW7 1377 aa20.46■□□□□ 0.87
MCF2L-230ENST00000491028 ACKR2O00590 384 aa20.45■□□□□ 0.86
MCF2L-230ENST00000491028 PARNO95453 639 aaKnown RBP20.45■□□□□ 0.86
MCF2L-230ENST00000491028 PAK1Q13153 545 aa20.45■□□□□ 0.86
MCF2L-230ENST00000491028 ANO6Q4KMQ2 910 aa20.45■□□□□ 0.86
MCF2L-230ENST00000491028 FOXR2Q6PJQ5 311 aa20.45■□□□□ 0.86
MCF2L-230ENST00000491028 TRAF7Q6Q0C0 670 aa20.45■□□□□ 0.86
MCF2L-230ENST00000491028 NELFCDQ8IXH7 590 aa20.45■□□□□ 0.86
MCF2L-230ENST00000491028 TMEM40Q8WWA1 233 aa20.45■□□□□ 0.86
MCF2L-230ENST00000491028 MRPL4Q9BYD3 311 aaKnown RBP20.45■□□□□ 0.86
MCF2L-230ENST00000491028 NAT10Q9H0A0 1025 aaKnown RBP20.45■□□□□ 0.86
MCF2L-230ENST00000491028 DNAJC25Q9H1X3 360 aa20.45■□□□□ 0.86
MCF2L-230ENST00000491028 BICDL2A1A5D9 508 aa20.44■□□□□ 0.86
MCF2L-230ENST00000491028 PDXKO00764 312 aa20.44■□□□□ 0.86
MCF2L-230ENST00000491028 ERLIN2O94905 339 aa20.44■□□□□ 0.86
MCF2L-230ENST00000491028 CCNE1P24864 410 aa20.44■□□□□ 0.86
MCF2L-230ENST00000491028 HOXD13P35453 343 aa20.44■□□□□ 0.86
MCF2L-230ENST00000491028 SNRPFP62306 86 aaKnown RBP20.44■□□□□ 0.86
MCF2L-230ENST00000491028 KCNA1Q09470 495 aa20.44■□□□□ 0.86
MCF2L-230ENST00000491028 AMHR2Q16671 573 aa20.44■□□□□ 0.86
MCF2L-230ENST00000491028 FBXO47Q5MNV8 452 aa20.44■□□□□ 0.86
MCF2L-230ENST00000491028 CENPPQ6IPU0 288 aa20.44■□□□□ 0.86
MCF2L-230ENST00000491028 KLHL10Q6JEL2 608 aa20.44■□□□□ 0.86
MCF2L-230ENST00000491028 ZPBP2Q6X784 338 aa20.44■□□□□ 0.86
MCF2L-230ENST00000491028 C11orf57Q6ZUT1 292 aaPredicted RBP20.44■□□□□ 0.86
MCF2L-230ENST00000491028 SYCP3Q8IZU3 236 aa20.44■□□□□ 0.86
MCF2L-230ENST00000491028 GOLGA5Q8TBA6 731 aa20.44■□□□□ 0.86
MCF2L-230ENST00000491028 P2RX5Q93086 422 aa20.44■□□□□ 0.86
MCF2L-230ENST00000491028 HTATIP2Q9BUP3 242 aa20.44■□□□□ 0.86
MCF2L-230ENST00000491028 GBP3Q9H0R5 595 aa20.44■□□□□ 0.86
MCF2L-230ENST00000491028 KCTD10Q9H3F6 313 aa20.44■□□□□ 0.86
MCF2L-230ENST00000491028 TSPY26PQ9H489 355 aa20.44■□□□□ 0.86
MCF2L-230ENST00000491028 TMEM39AQ9NV64 488 aa20.44■□□□□ 0.86
MCF2L-230ENST00000491028 TYW1Q9NV66 732 aaKnown RBP20.44■□□□□ 0.86
MCF2L-230ENST00000491028 CGNQ9P2M7 1197 aaKnown RBP20.44■□□□□ 0.86
MCF2L-230ENST00000491028 RWDD2AQ9UIY3 292 aa20.44■□□□□ 0.86
MCF2L-230ENST00000491028 CTNND2Q9UQB3 1225 aa20.44■□□□□ 0.86
MCF2L-230ENST00000491028 CNTNAP2Q9UHC6 1331 aa20.44■□□□□ 0.86
MCF2L-230ENST00000491028 HNRNPDLO14979 420 aaKnown RBP20.43■□□□□ 0.86
MCF2L-230ENST00000491028 AXLP30530 894 aa20.43■□□□□ 0.86
MCF2L-230ENST00000491028 LRRC63Q05C16 580 aa20.43■□□□□ 0.86
MCF2L-230ENST00000491028 NCBP1Q09161 790 aaKnown RBP20.43■□□□□ 0.86
MCF2L-230ENST00000491028 PRPF4BQ13523 1007 aaKnown RBP20.43■□□□□ 0.86
MCF2L-230ENST00000491028 TSHZ1Q6ZSZ6 1077 aa20.43■□□□□ 0.86
MCF2L-230ENST00000491028 FAM43BQ6ZT52 329 aaPredicted RBP20.43■□□□□ 0.86
MCF2L-230ENST00000491028 HS2ST1Q7LGA3 356 aa20.43■□□□□ 0.86
MCF2L-230ENST00000491028 CATSPER4Q7RTX7 472 aa20.43■□□□□ 0.86
MCF2L-230ENST00000491028 NELFBQ8WX92 580 aa20.43■□□□□ 0.86
MCF2L-230ENST00000491028 BICD1Q96G01 975 aa20.43■□□□□ 0.86
MCF2L-230ENST00000491028 TSG101Q99816 390 aa20.43■□□□□ 0.86
MCF2L-230ENST00000491028 BPIFA3Q9BQP9 254 aa20.43■□□□□ 0.86
MCF2L-230ENST00000491028 TRAF3IP3Q9Y228 551 aa20.43■□□□□ 0.86
MCF2L-230ENST00000491028 NOC2LQ9Y3T9 749 aaKnown RBP20.43■□□□□ 0.86
MCF2L-230ENST00000491028 KIAA0355O15063 1070 aa20.42■□□□□ 0.86
MCF2L-230ENST00000491028 GPR182O15218 404 aa20.42■□□□□ 0.86
MCF2L-230ENST00000491028 CALUO43852 315 aaPredicted RBP20.42■□□□□ 0.86
MCF2L-230ENST00000491028 TSPAN1O60635 241 aa20.42■□□□□ 0.86
MCF2L-230ENST00000491028 RPS6KA5O75582 802 aa20.42■□□□□ 0.86
MCF2L-230ENST00000491028 IQCF3P0C7M6 154 aa20.42■□□□□ 0.86
MCF2L-230ENST00000491028 LIG4P49917 911 aa20.42■□□□□ 0.86
MCF2L-230ENST00000491028 ZCWPW2Q504Y3 356 aa20.42■□□□□ 0.86
MCF2L-230ENST00000491028 FAM228AQ86W67 206 aa20.42■□□□□ 0.86
MCF2L-230ENST00000491028 SEMA6BQ9H3T3 888 aa20.42■□□□□ 0.86
MCF2L-230ENST00000491028 TGFB1I1O43294 461 aa20.41■□□□□ 0.86
MCF2L-230ENST00000491028 CSDE1O75534 798 aaKnown RBP20.41■□□□□ 0.86
MCF2L-230ENST00000491028 EDN1P05305 212 aa20.41■□□□□ 0.86
MCF2L-230ENST00000491028 GHRP10912 638 aa20.41■□□□□ 0.86
MCF2L-230ENST00000491028 LPIN1Q14693 890 aa20.41■□□□□ 0.86
MCF2L-230ENST00000491028 NFIL3Q16649 462 aa20.41■□□□□ 0.86
MCF2L-230ENST00000491028 EDRF1Q3B7T1 1238 aa20.41■□□□□ 0.86
MCF2L-230ENST00000491028 ACO2Q99798 780 aaKnown RBP20.41■□□□□ 0.86
MCF2L-230ENST00000491028 TARS2Q9BW92 718 aaKnown RBP20.41■□□□□ 0.86
MCF2L-230ENST00000491028 AGPAT5Q9NUQ2 364 aa20.41■□□□□ 0.86
MCF2L-230ENST00000491028 TNFSF13BQ9Y275 285 aa20.41■□□□□ 0.86
MCF2L-230ENST00000491028 B4GALT5O43286 388 aa20.4■□□□□ 0.86
MCF2L-230ENST00000491028 TOM1L1O75674 476 aa20.4■□□□□ 0.86
MCF2L-230ENST00000491028 FGFR4P22455 802 aa20.4■□□□□ 0.86
MCF2L-230ENST00000491028 ZNF165P49910 485 aa20.4■□□□□ 0.86
MCF2L-230ENST00000491028 PAK2Q13177 524 aa20.4■□□□□ 0.86
MCF2L-230ENST00000491028 TMEM132AQ24JP5 1023 aa20.4■□□□□ 0.86
MCF2L-230ENST00000491028 UMODL1Q5DID0 1318 aa20.4■□□□□ 0.86
MCF2L-230ENST00000491028 ATF7IP2Q5U623 682 aa20.4■□□□□ 0.86
MCF2L-230ENST00000491028 SLFN12LQ6IEE8 588 aa20.4■□□□□ 0.86
MCF2L-230ENST00000491028 TTI2Q6NXR4 508 aa20.4■□□□□ 0.86
MCF2L-230ENST00000491028 C12orf56Q8IXR9 622 aa20.4■□□□□ 0.86
MCF2L-230ENST00000491028 TMEM174Q8WUU8 243 aa20.4■□□□□ 0.86
MCF2L-230ENST00000491028 CCDC51Q96ER9 411 aa20.4■□□□□ 0.86
MCF2L-230ENST00000491028 PPP1R12CQ9BZL4 782 aa20.4■□□□□ 0.86
MCF2L-230ENST00000491028 WNT8AQ9H1J5 351 aa20.4■□□□□ 0.86
MCF2L-230ENST00000491028 ERVK-5Q9HDB9 667 aa20.4■□□□□ 0.86
MCF2L-230ENST00000491028 AGPAT3Q9NRZ7 376 aa20.4■□□□□ 0.86
MCF2L-230ENST00000491028 STYXL1Q9Y6J8 313 aa20.4■□□□□ 0.86
MCF2L-230ENST00000491028 N4BP3O15049 544 aa20.39■□□□□ 0.85
MCF2L-230ENST00000491028 TIMP1P01033 207 aa20.39■□□□□ 0.85
MCF2L-230ENST00000491028 ARF4P18085 180 aaPredicted RBP20.39■□□□□ 0.85
MCF2L-230ENST00000491028 GARTP22102 1010 aa20.39■□□□□ 0.85
MCF2L-230ENST00000491028 PROZP22891 400 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms