RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 FAM189BP81408 668 aa17.43■□□□□ 0.38
TRA2A-208ENST00000490942 GTF2BQ00403 316 aa17.43■□□□□ 0.38
TRA2A-208ENST00000490942 SHHQ15465 462 aa17.43■□□□□ 0.38
TRA2A-208ENST00000490942 HERC4Q5GLZ8 1057 aaPredicted RBP17.43■□□□□ 0.38
TRA2A-208ENST00000490942 NOTUMQ6P988 496 aa17.43■□□□□ 0.38
TRA2A-208ENST00000490942 ZPBP2Q6X784 338 aa17.43■□□□□ 0.38
TRA2A-208ENST00000490942 STXBP4Q6ZWJ1 553 aa17.43■□□□□ 0.38
TRA2A-208ENST00000490942 SLC24A5Q71RS6 500 aa17.43■□□□□ 0.38
TRA2A-208ENST00000490942 ZNF720Q7Z2F6 126 aa17.43■□□□□ 0.38
TRA2A-208ENST00000490942 HAUS6Q7Z4H7 955 aa17.43■□□□□ 0.38
TRA2A-208ENST00000490942 STAMQ92783 540 aa17.43■□□□□ 0.38
TRA2A-208ENST00000490942 RNPC3Q96LT9 517 aaKnown RBP17.43■□□□□ 0.38
TRA2A-208ENST00000490942 ZHX3Q9H4I2 956 aa17.43■□□□□ 0.38
TRA2A-208ENST00000490942 ELAC1Q9H777 363 aaKnown RBP17.43■□□□□ 0.38
TRA2A-208ENST00000490942 POLD4Q9HCU8 107 aa17.43■□□□□ 0.38
TRA2A-208ENST00000490942 LMBRD1Q9NUN5 540 aa17.43■□□□□ 0.38
TRA2A-208ENST00000490942 SLC4A7Q9Y6M7 1214 aa17.43■□□□□ 0.38
TRA2A-208ENST00000490942 DENND3A2RUS2 1198 aa17.42■□□□□ 0.38
TRA2A-208ENST00000490942 SLC16A4O15374 487 aa17.42■□□□□ 0.38
TRA2A-208ENST00000490942 ZNF623O75123 536 aa17.42■□□□□ 0.38
TRA2A-208ENST00000490942 NR1I2O75469 434 aa17.42■□□□□ 0.38
TRA2A-208ENST00000490942 PPP1R37O75864 691 aa17.42■□□□□ 0.38
TRA2A-208ENST00000490942 PRKCBP05771 671 aa17.42■□□□□ 0.38
TRA2A-208ENST00000490942 LIG1P18858 919 aa17.42■□□□□ 0.38
TRA2A-208ENST00000490942 DPYDQ12882 1025 aa17.42■□□□□ 0.38
TRA2A-208ENST00000490942 STRN3Q13033 797 aa17.42■□□□□ 0.38
TRA2A-208ENST00000490942 COASYQ13057 564 aa17.42■□□□□ 0.38
TRA2A-208ENST00000490942 PSMD2Q13200 908 aa17.42■□□□□ 0.38
TRA2A-208ENST00000490942 PRPF4BQ13523 1007 aaKnown RBP17.42■□□□□ 0.38
TRA2A-208ENST00000490942 CUL4BQ13620 913 aa17.42■□□□□ 0.38
TRA2A-208ENST00000490942 POSTNQ15063 836 aa17.42■□□□□ 0.38
TRA2A-208ENST00000490942 TCTN1Q2MV58 587 aa17.42■□□□□ 0.38
TRA2A-208ENST00000490942 C9orf50Q5SZB4 431 aa17.42■□□□□ 0.38
TRA2A-208ENST00000490942 APBB1IPQ7Z5R6 666 aaPredicted RBP17.42■□□□□ 0.38
TRA2A-208ENST00000490942 SFR1Q86XK3 245 aa17.42■□□□□ 0.38
TRA2A-208ENST00000490942 CCDC47Q96A33 483 aaKnown RBP17.42■□□□□ 0.38
TRA2A-208ENST00000490942 ADAM2Q99965 735 aa17.42■□□□□ 0.38
TRA2A-208ENST00000490942 STRA6Q9BX79 667 aa17.42■□□□□ 0.38
TRA2A-208ENST00000490942 MRPL4Q9BYD3 311 aaKnown RBP17.42■□□□□ 0.38
TRA2A-208ENST00000490942 GTPBP4Q9BZE4 634 aaKnown RBP17.42■□□□□ 0.38
TRA2A-208ENST00000490942 PIN4Q9Y237 131 aaKnown RBP17.42■□□□□ 0.38
TRA2A-208ENST00000490942 PCDHB13Q9Y5F0 798 aa17.42■□□□□ 0.38
TRA2A-208ENST00000490942 A0A0U1RQF3 1178 aa17.41■□□□□ 0.38
TRA2A-208ENST00000490942 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.41■□□□□ 0.38
TRA2A-208ENST00000490942 C9IYK1 514 aa17.41■□□□□ 0.38
TRA2A-208ENST00000490942 K7ENM7 598 aa17.41■□□□□ 0.38
TRA2A-208ENST00000490942 CSDE1O75534 798 aaKnown RBP17.41■□□□□ 0.38
TRA2A-208ENST00000490942 PIGRP01833 764 aa17.41■□□□□ 0.38
TRA2A-208ENST00000490942 ARF4P18085 180 aaPredicted RBP17.41■□□□□ 0.38
TRA2A-208ENST00000490942 SARSP49591 514 aaKnown RBP17.41■□□□□ 0.38
TRA2A-208ENST00000490942 KCNB1Q14721 858 aa17.41■□□□□ 0.38
TRA2A-208ENST00000490942 RTN4RL1Q86UN2 441 aaPredicted RBP17.41■□□□□ 0.38
TRA2A-208ENST00000490942 CRIPAKQ8N1N5 446 aa17.41■□□□□ 0.38
TRA2A-208ENST00000490942 LINC01599Q8WXQ3 324 aa17.41■□□□□ 0.38
TRA2A-208ENST00000490942 TOP1MTQ969P6 601 aa17.41■□□□□ 0.38
TRA2A-208ENST00000490942 KIFC3Q9BVG8 833 aa17.41■□□□□ 0.38
TRA2A-208ENST00000490942 BLZF1Q9H2G9 400 aa17.41■□□□□ 0.38
TRA2A-208ENST00000490942 MRPL44Q9H9J2 332 aaKnown RBP17.41■□□□□ 0.38
TRA2A-208ENST00000490942 TBX20Q9UMR3 447 aa17.41■□□□□ 0.38
TRA2A-208ENST00000490942 ZBBXA8MT70 800 aa17.4■□□□□ 0.38
TRA2A-208ENST00000490942 N4BP3O15049 544 aa17.4■□□□□ 0.38
TRA2A-208ENST00000490942 EIF3DO15371 548 aaKnown RBP eCLIP17.4■□□□□ 0.38
TRA2A-208ENST00000490942 KLRC4O43908 158 aa17.4■□□□□ 0.38
TRA2A-208ENST00000490942 EOMESO95936 686 aa17.4■□□□□ 0.38
TRA2A-208ENST00000490942 STAG3L1P0CL83 205 aa17.4■□□□□ 0.38
TRA2A-208ENST00000490942 FGFR4P22455 802 aa17.4■□□□□ 0.38
TRA2A-208ENST00000490942 LRIT3Q3SXY7 679 aa17.4■□□□□ 0.38
TRA2A-208ENST00000490942 FAM26FQ5R3K3 315 aa17.4■□□□□ 0.38
TRA2A-208ENST00000490942 TAS1R3Q7RTX0 852 aa17.4■□□□□ 0.38
TRA2A-208ENST00000490942 NPAS4Q8IUM7 802 aa17.4■□□□□ 0.38
TRA2A-208ENST00000490942 MAP4K3Q8IVH8 894 aa17.4■□□□□ 0.38
TRA2A-208ENST00000490942 SPATA20Q8TB22 786 aa17.4■□□□□ 0.38
TRA2A-208ENST00000490942 GSDMAQ96QA5 445 aa17.4■□□□□ 0.38
TRA2A-208ENST00000490942 RMND1Q9NWS8 449 aa17.4■□□□□ 0.38
TRA2A-208ENST00000490942 TMEM161AQ9NX61 479 aa17.4■□□□□ 0.38
TRA2A-208ENST00000490942 CXXC1Q9P0U4 656 aaPredicted RBP17.4■□□□□ 0.38
TRA2A-208ENST00000490942 EXOC7Q9UPT5 735 aa17.4■□□□□ 0.38
TRA2A-208ENST00000490942 TNFSF13BQ9Y275 285 aa17.4■□□□□ 0.38
TRA2A-208ENST00000490942 MYH11P35749 1972 aa17.4■□□□□ 0.38
TRA2A-208ENST00000490942 UBE4BO95155 1302 aa17.4■□□□□ 0.38
TRA2A-208ENST00000490942 MICAL3Q7RTP6 2002 aa17.39■□□□□ 0.37
TRA2A-208ENST00000490942 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.39■□□□□ 0.37
TRA2A-208ENST00000490942 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.39■□□□□ 0.37
TRA2A-208ENST00000490942 MGEA5O60502 916 aa17.39■□□□□ 0.37
TRA2A-208ENST00000490942 RHOBTB3O94955 611 aa17.39■□□□□ 0.37
TRA2A-208ENST00000490942 SMC2O95347 1197 aa17.39■□□□□ 0.37
TRA2A-208ENST00000490942 MBD3O95983 291 aa17.39■□□□□ 0.37
TRA2A-208ENST00000490942 RPN1P04843 607 aaKnown RBP17.39■□□□□ 0.37
TRA2A-208ENST00000490942 ATP2A2P16615 1042 aaKnown RBP17.39■□□□□ 0.37
TRA2A-208ENST00000490942 PTMSP20962 102 aa17.39■□□□□ 0.37
TRA2A-208ENST00000490942 TPRNQ4KMQ1 711 aa17.39■□□□□ 0.37
TRA2A-208ENST00000490942 TWF2Q6IBS0 349 aaKnown RBP17.39■□□□□ 0.37
TRA2A-208ENST00000490942 SLC27A1Q6PCB7 646 aa17.39■□□□□ 0.37
TRA2A-208ENST00000490942 GRAMD1CQ8IYS0 662 aa17.39■□□□□ 0.37
TRA2A-208ENST00000490942 TMEM206Q9H813 350 aa17.39■□□□□ 0.37
TRA2A-208ENST00000490942 PTPRHQ9HD43 1115 aa17.39■□□□□ 0.37
TRA2A-208ENST00000490942 FAM105AQ9NUU6 356 aa17.39■□□□□ 0.37
TRA2A-208ENST00000490942 PCDH10Q9P2E7 1040 aa17.39■□□□□ 0.37
TRA2A-208ENST00000490942 COLQQ9Y215 455 aaPredicted RBP17.39■□□□□ 0.37
TRA2A-208ENST00000490942 ZMYM2Q9UBW7 1377 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms