RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 NR3C1P04150 777 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 IL2RBP14784 551 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 DSG1Q02413 1049 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 WDR44Q5JSH3 913 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 TGFBRAP1Q8WUH2 860 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 SCG3Q8WXD2 468 aaKnown RBP12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 TEKT1Q969V4 418 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 NSL1Q96IY1 281 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 ZMAT2Q96NC0 199 aaKnown RBP12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 ORAI2Q96SN7 254 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 IL1RAPL1Q9NZN1 696 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 TRIM33Q9UPN9 1127 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 SIK3Q9Y2K2 1263 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 PIK3C2BO00750 1634 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 FRMPD2Q68DX3 1309 aaPredicted RBP12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 HLA-DOAP06340 250 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 PAEPP09466 180 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 TMEM253P0C7T8 217 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 PICALMQ13492 652 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 RABGAP1LQ5R372 815 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 NSMFQ6X4W1 530 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 CYFIP1Q7L576 1253 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 FRMD5Q7Z6J6 570 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 NLRP7Q8WX94 980 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 C18orf8Q96DM3 657 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 CCDC97Q96F63 343 aaPredicted RBP12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 TRAIPQ9BWF2 469 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 SLIT1O75093 1534 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 DCDC2CA8MYV0 355 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 E9PMD0 336 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 EPHB6O15197 1021 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 MMP13P45452 471 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 YWHAGP61981 247 aaKnown RBP eCLIP12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 CHRNDQ07001 517 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 PRR16Q569H4 304 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 ARMC3Q5W041 872 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 ZNF572Q7Z3I7 529 aaPredicted RBP12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 KIAA0825Q8IV33 1275 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 TPH2Q8IWU9 490 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 GALNT15Q8N3T1 639 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 MORC4Q8TE76 937 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 PYROXD1Q8WU10 500 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 CNKSR1Q969H4 720 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 MTBPQ96DY7 904 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 LRGUKQ96M69 825 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 CDC42EP4Q9H3Q1 356 aaKnown RBP12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 DMAP1Q9NPF5 467 aaPredicted RBP12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 ADAM22Q9P0K1 906 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 ALG6Q9Y672 507 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 SCINQ9Y6U3 715 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 ERCC6L2Q5T890 1561 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 ZFXP17010 805 aaPredicted RBP12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 SLC34A1Q06495 639 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 TROAPQ12815 778 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 MKRN4PQ13434 485 aaPredicted RBP12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 PKN1Q16512 942 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 KNOP1Q1ED39 458 aaKnown RBP12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 IZUMO3Q5VZ72 239 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 MARCH10Q8NA82 808 aaPredicted RBP12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 LZICQ8WZA0 190 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 IMPG2Q9BZV3 1241 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 ZCWPW1Q9H0M4 648 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 B2RBV5 119 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 SGK1O00141 431 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 RIPK2O43353 540 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 ORC2Q13416 577 aaPredicted RBP12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 PARP10Q53GL7 1025 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 NLRP10Q86W26 655 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 INPP5DQ92835 1189 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 ATP2A3Q93084 1043 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 COA7Q96BR5 231 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 FNBP1Q96RU3 617 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 MYLK2Q9H1R3 596 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 TFCP2L1Q9NZI6 479 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 WFS1O76024 890 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 NUDT17P0C025 328 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 TMPRSS15P98073 1019 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 MIIPQ5JXC2 388 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 HP1BP3Q5SSJ5 553 aaPredicted RBP12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 ATG16L1Q676U5 607 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 KRT80Q6KB66 452 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 LRRC74BQ6ZQY2 392 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 ACSBG1Q96GR2 724 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 HEMGNQ9BXL5 484 aa12.04□□□□□ -0.48
CRNKL1-204ENST00000490910 IPO5O00410 1097 aaKnown RBP12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 DNAJC6O75061 913 aa12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 NSFP46459 744 aaKnown RBP12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 RAB27AP51159 221 aa12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 KDSRQ06136 332 aa12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 TAF1BQ53T94 588 aaPredicted RBP12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 ZNF746Q6NUN9 644 aaPredicted RBP12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 USP17L2Q6R6M4 530 aa12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 ZNF564Q8TBZ8 553 aaPredicted RBP12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 SCFD2Q8WU76 684 aa12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 ZNF512BQ96KM6 892 aaPredicted RBP12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 MAK16Q9BXY0 300 aaKnown RBP12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 RANBP17Q9H2T7 1088 aaKnown RBP12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 AGLP35573 1532 aa12.03□□□□□ -0.48
CRNKL1-204ENST00000490910 MEIS1O00470 390 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms