RNA–Protein interactions for RNA: ENST00000490544.1

C9orf43-203, Transcript of chromosome 9 open reading frame 43, humanhuman

TSL 3

Gene C9orf43, Length 547 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-203ENST00000490544 NPTX2P47972 431 aa17.1■□□□□ 0.33
C9orf43-203ENST00000490544 PRPF4BQ13523 1007 aaKnown RBP17.1■□□□□ 0.33
C9orf43-203ENST00000490544 PCBP1Q15365 356 aaKnown RBP eCLIP17.1■□□□□ 0.33
C9orf43-203ENST00000490544 ARSHQ5FYA8 562 aa17.1■□□□□ 0.33
C9orf43-203ENST00000490544 NOTUMQ6P988 496 aa17.1■□□□□ 0.33
C9orf43-203ENST00000490544 SV2BQ7L1I2 683 aa17.1■□□□□ 0.33
C9orf43-203ENST00000490544 DYMQ7RTS9 669 aa17.1■□□□□ 0.33
C9orf43-203ENST00000490544 CDR2LQ86X02 465 aaPredicted RBP17.1■□□□□ 0.33
C9orf43-203ENST00000490544 LPPQ93052 612 aa17.1■□□□□ 0.33
C9orf43-203ENST00000490544 TGS1Q96RS0 853 aaKnown RBP17.1■□□□□ 0.33
C9orf43-203ENST00000490544 CDX2Q99626 313 aaPredicted RBP17.1■□□□□ 0.33
C9orf43-203ENST00000490544 C17orf80Q9BSJ5 609 aa17.1■□□□□ 0.33
C9orf43-203ENST00000490544 FAM105AQ9NUU6 356 aa17.1■□□□□ 0.33
C9orf43-203ENST00000490544 MYO9BQ13459 2157 aa17.1■□□□□ 0.33
C9orf43-203ENST00000490544 A0A0U1RQF3 1178 aa17.09■□□□□ 0.33
C9orf43-203ENST00000490544 SKIP12755 728 aa17.09■□□□□ 0.33
C9orf43-203ENST00000490544 PLS3P13797 630 aa17.09■□□□□ 0.33
C9orf43-203ENST00000490544 ARF4P18085 180 aaPredicted RBP17.09■□□□□ 0.33
C9orf43-203ENST00000490544 AXLP30530 894 aa17.09■□□□□ 0.33
C9orf43-203ENST00000490544 HOXA11P31270 313 aaPredicted RBP17.09■□□□□ 0.33
C9orf43-203ENST00000490544 RAB27AP51159 221 aa17.09■□□□□ 0.33
C9orf43-203ENST00000490544 EFNA5P52803 228 aa17.09■□□□□ 0.33
C9orf43-203ENST00000490544 AXDND1Q5T1B0 1012 aaPredicted RBP17.09■□□□□ 0.33
C9orf43-203ENST00000490544 CMTR2Q8IYT2 770 aaKnown RBP17.09■□□□□ 0.33
C9orf43-203ENST00000490544 MYCT1Q8N699 235 aa17.09■□□□□ 0.33
C9orf43-203ENST00000490544 SP7Q8TDD2 431 aaPredicted RBP17.09■□□□□ 0.33
C9orf43-203ENST00000490544 HELQQ8TDG4 1101 aa17.09■□□□□ 0.33
C9orf43-203ENST00000490544 APOL6Q9BWW8 343 aa17.09■□□□□ 0.33
C9orf43-203ENST00000490544 ELAC1Q9H777 363 aaKnown RBP17.09■□□□□ 0.33
C9orf43-203ENST00000490544 GDPD2Q9HCC8 539 aa17.09■□□□□ 0.33
C9orf43-203ENST00000490544 RCOR1Q9UKL0 485 aa17.09■□□□□ 0.33
C9orf43-203ENST00000490544 ODF2LQ9ULJ1 636 aa17.09■□□□□ 0.33
C9orf43-203ENST00000490544 USP20Q9Y2K6 914 aa17.09■□□□□ 0.33
C9orf43-203ENST00000490544 PCDHB2Q9Y5E7 798 aa17.09■□□□□ 0.33
C9orf43-203ENST00000490544 PHLPP2Q6ZVD8 1323 aa17.09■□□□□ 0.33
C9orf43-203ENST00000490544 CHD9Q3L8U1 2897 aa17.09■□□□□ 0.33
C9orf43-203ENST00000490544 UNC80Q8N2C7 3258 aa17.08■□□□□ 0.33
C9orf43-203ENST00000490544 CNTNAP2Q9UHC6 1331 aa17.08■□□□□ 0.32
C9orf43-203ENST00000490544 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.08■□□□□ 0.32
C9orf43-203ENST00000490544 K7ERI5 159 aa17.08■□□□□ 0.32
C9orf43-203ENST00000490544 RFXAPO00287 272 aa17.08■□□□□ 0.32
C9orf43-203ENST00000490544 HOXA2O43364 376 aa17.08■□□□□ 0.32
C9orf43-203ENST00000490544 NPTXRO95502 500 aa17.08■□□□□ 0.32
C9orf43-203ENST00000490544 FOSL2P15408 326 aa17.08■□□□□ 0.32
C9orf43-203ENST00000490544 IGFBP4P22692 258 aa17.08■□□□□ 0.32
C9orf43-203ENST00000490544 CTNNB1P35222 781 aa17.08■□□□□ 0.32
C9orf43-203ENST00000490544 SMTNP53814 917 aa17.08■□□□□ 0.32
C9orf43-203ENST00000490544 FAM189BP81408 668 aa17.08■□□□□ 0.32
C9orf43-203ENST00000490544 AMHR2Q16671 573 aa17.08■□□□□ 0.32
C9orf43-203ENST00000490544 NAALADL2Q58DX5 795 aa17.08■□□□□ 0.32
C9orf43-203ENST00000490544 CRIPAKQ8N1N5 446 aa17.08■□□□□ 0.32
C9orf43-203ENST00000490544 GDPD5Q8WTR4 605 aa17.08■□□□□ 0.32
C9orf43-203ENST00000490544 ZNF689Q96CS4 500 aaPredicted RBP17.08■□□□□ 0.32
C9orf43-203ENST00000490544 GAS2L1Q99501 681 aaPredicted RBP17.08■□□□□ 0.32
C9orf43-203ENST00000490544 EIF2AQ9BY44 585 aaKnown RBP17.08■□□□□ 0.32
C9orf43-203ENST00000490544 SCAND2PQ9GZW5 306 aaPredicted RBP17.08■□□□□ 0.32
C9orf43-203ENST00000490544 CCDC113Q9H0I3 377 aa17.08■□□□□ 0.32
C9orf43-203ENST00000490544 C17orf75Q9HAS0 396 aa17.08■□□□□ 0.32
C9orf43-203ENST00000490544 LARSQ9P2J5 1176 aaKnown RBP17.08■□□□□ 0.32
C9orf43-203ENST00000490544 INPP5FQ9Y2H2 1132 aa17.08■□□□□ 0.32
C9orf43-203ENST00000490544 MRPL42Q9Y6G3 142 aaKnown RBP17.08■□□□□ 0.32
C9orf43-203ENST00000490544 PLXNA4Q9HCM2 1894 aa17.07■□□□□ 0.32
C9orf43-203ENST00000490544 EPOPA6NHQ4 379 aa17.07■□□□□ 0.32
C9orf43-203ENST00000490544 K7ENM7 598 aa17.07■□□□□ 0.32
C9orf43-203ENST00000490544 POLR2DO15514 142 aaKnown RBP17.07■□□□□ 0.32
C9orf43-203ENST00000490544 EOMESO95936 686 aa17.07■□□□□ 0.32
C9orf43-203ENST00000490544 ATF7P17544 494 aaPredicted RBP17.07■□□□□ 0.32
C9orf43-203ENST00000490544 STRN3Q13033 797 aa17.07■□□□□ 0.32
C9orf43-203ENST00000490544 GIT2Q14161 759 aa17.07■□□□□ 0.32
C9orf43-203ENST00000490544 UBXN11Q5T124 520 aa17.07■□□□□ 0.32
C9orf43-203ENST00000490544 RESP18Q5W5W9 173 aa17.07■□□□□ 0.32
C9orf43-203ENST00000490544 SLC27A1Q6PCB7 646 aa17.07■□□□□ 0.32
C9orf43-203ENST00000490544 IQUBQ8NA54 791 aa17.07■□□□□ 0.32
C9orf43-203ENST00000490544 FBXO22Q8NEZ5 403 aa17.07■□□□□ 0.32
C9orf43-203ENST00000490544 STAMQ92783 540 aa17.07■□□□□ 0.32
C9orf43-203ENST00000490544 PGBD4Q96DM1 585 aa17.07■□□□□ 0.32
C9orf43-203ENST00000490544 CCDC51Q96ER9 411 aa17.07■□□□□ 0.32
C9orf43-203ENST00000490544 PRIMPOLQ96LW4 560 aa17.07■□□□□ 0.32
C9orf43-203ENST00000490544 FZD8Q9H461 694 aa17.07■□□□□ 0.32
C9orf43-203ENST00000490544 RC3H2Q9HBD1 1191 aaKnown RBP17.07■□□□□ 0.32
C9orf43-203ENST00000490544 PARVGQ9HBI0 331 aa17.07■□□□□ 0.32
C9orf43-203ENST00000490544 CDH23Q9H251 3354 aa17.07■□□□□ 0.32
C9orf43-203ENST00000490544 ATG2AQ2TAZ0 1938 aa17.06■□□□□ 0.32
C9orf43-203ENST00000490544 CHD7Q9P2D1 2997 aa17.06■□□□□ 0.32
C9orf43-203ENST00000490544 TTLL13PA6NNM8 815 aa17.06■□□□□ 0.32
C9orf43-203ENST00000490544 MEIS3P2A8K0S8 358 aa17.06■□□□□ 0.32
C9orf43-203ENST00000490544 N4BP3O15049 544 aa17.06■□□□□ 0.32
C9orf43-203ENST00000490544 CSPG5O95196 566 aa17.06■□□□□ 0.32
C9orf43-203ENST00000490544 IDEP14735 1019 aa17.06■□□□□ 0.32
C9orf43-203ENST00000490544 ERVK-21P61565 698 aa17.06■□□□□ 0.32
C9orf43-203ENST00000490544 EPC2Q52LR7 807 aa17.06■□□□□ 0.32
C9orf43-203ENST00000490544 CLLU1OSQ5K130 101 aa17.06■□□□□ 0.32
C9orf43-203ENST00000490544 GLB1LQ6UWU2 654 aa17.06■□□□□ 0.32
C9orf43-203ENST00000490544 PPP4R3CPQ6ZMV5 832 aa17.06■□□□□ 0.32
C9orf43-203ENST00000490544 ZNF598Q86UK7 904 aaKnown RBP17.06■□□□□ 0.32
C9orf43-203ENST00000490544 TMEM192Q8IY95 271 aa17.06■□□□□ 0.32
C9orf43-203ENST00000490544 MICALL1Q8N3F8 863 aa17.06■□□□□ 0.32
C9orf43-203ENST00000490544 DDX12PQ92771 950 aa17.06■□□□□ 0.32
C9orf43-203ENST00000490544 ADPGKQ9BRR6 497 aa17.06■□□□□ 0.32
C9orf43-203ENST00000490544 TMEM117Q9H0C3 514 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms