RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 TSPYL2Q9H2G4 693 aaPredicted RBP17.28■□□□□ 0.36
PCCB-218ENST00000490504 ERVK-5Q9HDB9 667 aa17.28■□□□□ 0.36
PCCB-218ENST00000490504 IFNKQ9P0W0 207 aa17.28■□□□□ 0.36
PCCB-218ENST00000490504 THEGQ9P2T0 379 aa17.28■□□□□ 0.36
PCCB-218ENST00000490504 RWDD2AQ9UIY3 292 aa17.28■□□□□ 0.36
PCCB-218ENST00000490504 CTNND2Q9UQB3 1225 aa17.28■□□□□ 0.36
PCCB-218ENST00000490504 GDAQ9Y2T3 454 aa17.28■□□□□ 0.36
PCCB-218ENST00000490504 MICAL3Q7RTP6 2002 aa17.28■□□□□ 0.36
PCCB-218ENST00000490504 TMEM150BA6NC51 233 aa17.27■□□□□ 0.36
PCCB-218ENST00000490504 CBFA2T2O43439 604 aa17.27■□□□□ 0.36
PCCB-218ENST00000490504 RPS6KA5O75582 802 aa17.27■□□□□ 0.36
PCCB-218ENST00000490504 ATP1A3P13637 1013 aa17.27■□□□□ 0.36
PCCB-218ENST00000490504 ZNF18P17022 549 aa17.27■□□□□ 0.36
PCCB-218ENST00000490504 PAK1Q13153 545 aa17.27■□□□□ 0.36
PCCB-218ENST00000490504 STIM1Q13586 685 aa17.27■□□□□ 0.36
PCCB-218ENST00000490504 SKIV2LQ15477 1246 aaKnown RBP17.27■□□□□ 0.36
PCCB-218ENST00000490504 TARBP2Q15633 366 aaKnown RBP17.27■□□□□ 0.36
PCCB-218ENST00000490504 UNC13DQ70J99 1090 aa17.27■□□□□ 0.36
PCCB-218ENST00000490504 CRIPAKQ8N1N5 446 aa17.27■□□□□ 0.36
PCCB-218ENST00000490504 POLR3CQ9BUI4 534 aaPredicted RBP17.27■□□□□ 0.36
PCCB-218ENST00000490504 RC3H2Q9HBD1 1191 aaKnown RBP17.27■□□□□ 0.36
PCCB-218ENST00000490504 PRRC2BQ5JSZ5 2229 aaKnown RBP17.27■□□□□ 0.35
PCCB-218ENST00000490504 PVALEFA0A1B0GWK0 134 aa17.26■□□□□ 0.35
PCCB-218ENST00000490504 MGEA5O60502 916 aa17.26■□□□□ 0.35
PCCB-218ENST00000490504 CRYBB1P53674 252 aaPredicted RBP17.26■□□□□ 0.35
PCCB-218ENST00000490504 CATSPER3Q86XQ3 398 aa17.26■□□□□ 0.35
PCCB-218ENST00000490504 TMEM192Q8IY95 271 aa17.26■□□□□ 0.35
PCCB-218ENST00000490504 ADSSL1Q8N142 457 aa17.26■□□□□ 0.35
PCCB-218ENST00000490504 FIBCD1Q8N539 461 aa17.26■□□□□ 0.35
PCCB-218ENST00000490504 KCTD17Q8N5Z5 321 aa17.26■□□□□ 0.35
PCCB-218ENST00000490504 BANK1Q8NDB2 785 aa17.26■□□□□ 0.35
PCCB-218ENST00000490504 ATXN2LQ8WWM7 1075 aaKnown RBP17.26■□□□□ 0.35
PCCB-218ENST00000490504 ZNF689Q96CS4 500 aaPredicted RBP17.26■□□□□ 0.35
PCCB-218ENST00000490504 SH2D3AQ9BRG2 576 aa17.26■□□□□ 0.35
PCCB-218ENST00000490504 NIFKQ9BYG3 293 aaKnown RBP17.26■□□□□ 0.35
PCCB-218ENST00000490504 XPO4Q9C0E2 1151 aaKnown RBP17.26■□□□□ 0.35
PCCB-218ENST00000490504 LMCD1Q9NZU5 365 aa17.26■□□□□ 0.35
PCCB-218ENST00000490504 ST3GAL5Q9UNP4 418 aa17.26■□□□□ 0.35
PCCB-218ENST00000490504 AKT3Q9Y243 479 aa17.26■□□□□ 0.35
PCCB-218ENST00000490504 SIP14410 1827 aa17.26■□□□□ 0.35
PCCB-218ENST00000490504 REV3LO60673 3130 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 DGKIO75912 1065 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 SERPINC1P01008 464 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 LINC00271P0C7V0 271 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 PLA2G4BP0C869 781 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 SPATA31C1P0DKV0 1188 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 PPP1R2P41236 205 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 PRCPP42785 496 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 STX17P56962 302 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 XKR3Q5GH77 459 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 TJAP1Q5JTD0 557 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 POTEGQ6S5H5 508 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 FAM228AQ86W67 206 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 NELFBQ8WX92 580 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 ZNF668Q96K58 619 aaPredicted RBP17.25■□□□□ 0.35
PCCB-218ENST00000490504 SAMD11Q96NU1 681 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 CEP89Q96ST8 783 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 EIF2AK1Q9BQI3 630 aaKnown RBP17.25■□□□□ 0.35
PCCB-218ENST00000490504 ADAMTS10Q9H324 1103 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 SEPT9Q9UHD8 586 aaPredicted RBP17.25■□□□□ 0.35
PCCB-218ENST00000490504 ZKSCAN5Q9Y2L8 839 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 E9PMD0 336 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 TMOD1P28289 359 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 NLRP11P59045 1033 aaKnown RBP17.25■□□□□ 0.35
PCCB-218ENST00000490504 TBC1D8BQ0IIM8 1120 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 DRP2Q13474 957 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 MTERF2Q49AM1 385 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 COBLL1Q53SF7 1204 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 NPAS4Q8IUM7 802 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 DDX12PQ92771 950 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 ASB2Q96Q27 587 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 MAP7D2Q96T17 732 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 TUFT1Q9NNX1 390 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 BMP2KQ9NSY1 1161 aaPredicted RBP17.25■□□□□ 0.35
PCCB-218ENST00000490504 DNM3Q9UQ16 869 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.25■□□□□ 0.355e-7■■□□□ 13.3
PCCB-218ENST00000490504 XIRP2A4UGR9 3374 aa17.25■□□□□ 0.35
PCCB-218ENST00000490504 ADGRA3Q8IWK6 1321 aa17.24■□□□□ 0.35
PCCB-218ENST00000490504 GPR182O15218 404 aa17.24■□□□□ 0.35
PCCB-218ENST00000490504 CDK11BP21127 795 aaKnown RBP17.24■□□□□ 0.35
PCCB-218ENST00000490504 IBSPP21815 317 aaPredicted RBP17.24■□□□□ 0.35
PCCB-218ENST00000490504 MSNP26038 577 aaKnown RBP17.24■□□□□ 0.35
PCCB-218ENST00000490504 UBASH3AP57075 661 aa17.24■□□□□ 0.35
PCCB-218ENST00000490504 PSMC5P62195 406 aa17.24■□□□□ 0.35
PCCB-218ENST00000490504 MRPS5P82675 430 aaKnown RBP17.24■□□□□ 0.35
PCCB-218ENST00000490504 TFF2Q03403 129 aa17.24■□□□□ 0.35
PCCB-218ENST00000490504 GPM6BQ13491 265 aa17.24■□□□□ 0.35
PCCB-218ENST00000490504 BTG3Q14201 252 aaPredicted RBP17.24■□□□□ 0.35
PCCB-218ENST00000490504 TPD52L1Q16890 204 aaPredicted RBP17.24■□□□□ 0.35
PCCB-218ENST00000490504 DYMQ7RTS9 669 aa17.24■□□□□ 0.35
PCCB-218ENST00000490504 ADAM2Q99965 735 aa17.24■□□□□ 0.35
PCCB-218ENST00000490504 SAMSN1Q9NSI8 373 aaKnown RBP17.24■□□□□ 0.35
PCCB-218ENST00000490504 WRAP73Q9P2S5 460 aaPredicted RBP17.24■□□□□ 0.35
PCCB-218ENST00000490504 H3BNC9 293 aa17.23■□□□□ 0.35
PCCB-218ENST00000490504 PSMA7O14818 248 aa17.23■□□□□ 0.35
PCCB-218ENST00000490504 SSBP05455 408 aaKnown RBP eCLIP17.23■□□□□ 0.35
PCCB-218ENST00000490504 MUTP22033 750 aa17.23■□□□□ 0.35
PCCB-218ENST00000490504 GATMP50440 423 aa17.23■□□□□ 0.35
PCCB-218ENST00000490504 CDKAL1Q5VV42 579 aa17.23■□□□□ 0.35
PCCB-218ENST00000490504 ANO5Q75V66 913 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms