RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 GLG1Q92896 1179 aa8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 MAP4K1Q92918 833 aa8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 NXPE3Q969Y0 559 aa8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 MYADMQ96S97 322 aa8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 ELAC1Q9H777 363 aaKnown RBP8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 JMJD4Q9H9V9 463 aa8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 PRMT8Q9NR22 394 aaPredicted RBP8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 ENAMQ9NRM1 1142 aa8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 SEMA4GQ9NTN9 838 aa8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 MAP3K20Q9NYL2 800 aaKnown RBP8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 NOC2LQ9Y3T9 749 aaKnown RBP8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 MTF2Q9Y483 593 aaPredicted RBP8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 MYH15Q9Y2K3 1946 aa8.23□□□□□ -1.09
PDLIM1-203ENST00000490391 DOCK6Q96HP0 2047 aa8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 ZNF462Q96JM2 2506 aa8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 KANSL1LA0AUZ9 987 aa8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 CDC14CA4D256 554 aa8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 FIGNL2A6NMB9 653 aa8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 SRRM3A6NNA2 597 aaPredicted RBP8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 PPP1R11O60927 126 aaPredicted RBP8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 CXCL14O95715 111 aa8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 INSRRP14616 1297 aa8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 MARK3P27448 753 aa8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 SP4Q02446 784 aa8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 SRSF11Q05519 484 aaKnown RBP8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 HTR4Q13639 388 aa8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 DSC3Q14574 896 aa8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 PTPN14Q15678 1187 aa8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 GNPTABQ3T906 1256 aa8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 LAIR1Q6GTX8 287 aa8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 TSSK4Q6SA08 328 aa8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 PRR23CQ6ZRP0 262 aa8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 LRRC43Q8N309 656 aa8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 TTC14Q96N46 770 aa8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 SENP7Q9BQF6 1050 aa8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 BCO2Q9BYV7 579 aa8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 ATP6V0A4Q9HBG4 840 aa8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 WDR6Q9NNW5 1121 aaKnown RBP8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 ECHDC1Q9NTX5 307 aa8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 ERAP1Q9NZ08 941 aa8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 WASF3Q9UPY6 502 aa8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 PCDHA1Q9Y5I3 950 aa8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 CNTNAP5Q8WYK1 1306 aa8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 ASXL3Q9C0F0 2248 aa8.22□□□□□ -1.09
PDLIM1-203ENST00000490391 ACACAQ13085 2346 aa8.21□□□□□ -1.09
PDLIM1-203ENST00000490391 GSTTP1A0A1W2PQM5 241 aa8.21□□□□□ -1.1
PDLIM1-203ENST00000490391 DENND3A2RUS2 1198 aa8.21□□□□□ -1.1
PDLIM1-203ENST00000490391 ANHXE9PGG2 379 aa8.21□□□□□ -1.1
PDLIM1-203ENST00000490391 FIBPO43427 364 aa8.21□□□□□ -1.1
PDLIM1-203ENST00000490391 RETP07949 1114 aa8.21□□□□□ -1.1
PDLIM1-203ENST00000490391 CTSAP10619 480 aa8.21□□□□□ -1.1
PDLIM1-203ENST00000490391 GBP2P32456 591 aaPredicted RBP8.21□□□□□ -1.1
PDLIM1-203ENST00000490391 IGBP1P78318 339 aa8.21□□□□□ -1.1
PDLIM1-203ENST00000490391 CSRP2Q16527 193 aa8.21□□□□□ -1.1
PDLIM1-203ENST00000490391 LPAL2Q16609 132 aa8.21□□□□□ -1.1
PDLIM1-203ENST00000490391 CLLU1OSQ5K130 101 aa8.21□□□□□ -1.1
PDLIM1-203ENST00000490391 ZMYM1Q5SVZ6 1142 aa8.21□□□□□ -1.1
PDLIM1-203ENST00000490391 VPS53Q5VIR6 699 aa8.21□□□□□ -1.1
PDLIM1-203ENST00000490391 VPS52Q8N1B4 723 aa8.21□□□□□ -1.1
PDLIM1-203ENST00000490391 CMASQ8NFW8 434 aaPredicted RBP8.21□□□□□ -1.1
PDLIM1-203ENST00000490391 VN1R3Q9BXE9 311 aa8.21□□□□□ -1.1
PDLIM1-203ENST00000490391 RHOBTB2Q9BYZ6 727 aa8.21□□□□□ -1.1
PDLIM1-203ENST00000490391 OSBPL6Q9BZF3 934 aa8.21□□□□□ -1.1
PDLIM1-203ENST00000490391 ST3GAL5Q9UNP4 418 aa8.21□□□□□ -1.1
PDLIM1-203ENST00000490391 PCDHA2Q9Y5H9 948 aa8.21□□□□□ -1.1
PDLIM1-203ENST00000490391 APC2O95996 2303 aa8.21□□□□□ -1.1
PDLIM1-203ENST00000490391 BAZ2BQ9UIF8 2168 aaKnown RBP8.21□□□□□ -1.1
PDLIM1-203ENST00000490391 CACNA1EQ15878 2313 aa8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 SPAG17Q6Q759 2223 aa8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 SMIM35A0A1B0GVV1 85 aa8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 RRN3P2A6NIE6 340 aa8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 CYSRT1A8MQ03 144 aa8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 NT5C1B-RDH14C9J2C7 533 aa8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 M0QZ92 97 aa8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 RPS6KA5O75582 802 aa8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 STAM2O75886 525 aa8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 PAPLNO95428 1278 aa8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 LAMP2P13473 410 aa8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 CA8P35219 290 aa8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 MAGEA9P43362 315 aa8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 CLCN4P51793 760 aa8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 LIMK1P53667 647 aa8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 POLGP54098 1239 aaPredicted RBP8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 FZD5Q13467 585 aa8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 RRP12Q5JTH9 1297 aaKnown RBP8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 TSHZ3Q63HK5 1081 aa8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 FTSJ3Q8IY81 847 aaKnown RBP8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 SAMD3Q8N6K7 520 aa8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 BEND7Q8N7W2 519 aaPredicted RBP8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 PRR7Q8TB68 274 aa8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 BCL7CQ8WUZ0 217 aaPredicted RBP8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 TRAPPC12Q8WVT3 735 aa8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 CLDN23Q96B33 292 aa8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 MTMR8Q96EF0 704 aa8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 SHDQ96IW2 340 aa8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 PCYT2Q99447 389 aa8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 AMNQ9BXJ7 453 aa8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 FAM126AQ9BYI3 521 aaPredicted RBP8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 NUMBLQ9Y6R0 609 aa8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 GREB1Q4ZG55 1949 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms