RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 KRT79Q5XKE5 535 aa21.89■■□□□ 1.09
SMC4-222ENST00000490207 AGMOQ6ZNB7 445 aa21.89■■□□□ 1.09
SMC4-222ENST00000490207 MRPL10Q7Z7H8 261 aaKnown RBP21.89■■□□□ 1.09
SMC4-222ENST00000490207 URGCPQ8TCY9 931 aa21.89■■□□□ 1.09
SMC4-222ENST00000490207 MICAL1Q8TDZ2 1067 aa21.89■■□□□ 1.09
SMC4-222ENST00000490207 BHMT2Q9H2M3 363 aa21.89■■□□□ 1.09
SMC4-222ENST00000490207 RSAD1Q9HA92 442 aa21.89■■□□□ 1.09
SMC4-222ENST00000490207 TBC1D13Q9NVG8 400 aa21.89■■□□□ 1.09
SMC4-222ENST00000490207 SPG21Q9NZD8 308 aa21.89■■□□□ 1.09
SMC4-222ENST00000490207 TDRD15B5MCY1 1934 aaKnown RBP21.88■■□□□ 1.09
SMC4-222ENST00000490207 FSCN2O14926 492 aa21.88■■□□□ 1.09
SMC4-222ENST00000490207 LINC01565O15544 149 aa21.88■■□□□ 1.09
SMC4-222ENST00000490207 TBX10O75333 385 aa21.88■■□□□ 1.09
SMC4-222ENST00000490207 NCLP19338 710 aaKnown RBP21.88■■□□□ 1.09
SMC4-222ENST00000490207 LTBRP36941 435 aa21.88■■□□□ 1.09
SMC4-222ENST00000490207 NRIP1P48552 1158 aa21.88■■□□□ 1.09
SMC4-222ENST00000490207 BCAR1P56945 870 aa21.88■■□□□ 1.09
SMC4-222ENST00000490207 ERVFC1P60507 584 aa21.88■■□□□ 1.09
SMC4-222ENST00000490207 RNASELQ05823 741 aaKnown RBP21.88■■□□□ 1.09
SMC4-222ENST00000490207 PUS10Q3MIT2 529 aaKnown RBP21.88■■□□□ 1.09
SMC4-222ENST00000490207 PLPP4Q5VZY2 271 aa21.88■■□□□ 1.09
SMC4-222ENST00000490207 CDCA2Q69YH5 1023 aaPredicted RBP21.88■■□□□ 1.09
SMC4-222ENST00000490207 PTCRAQ6ISU1 281 aaPredicted RBP21.88■■□□□ 1.09
SMC4-222ENST00000490207 ZBTB8OSQ8IWT0 167 aa21.88■■□□□ 1.09
SMC4-222ENST00000490207 SLC39A11Q8N1S5 342 aa21.88■■□□□ 1.09
SMC4-222ENST00000490207 CNNM3Q8NE01 707 aa21.88■■□□□ 1.09
SMC4-222ENST00000490207 EIF2AQ9BY44 585 aaKnown RBP21.88■■□□□ 1.09
SMC4-222ENST00000490207 CSRNP2Q9H175 543 aa21.88■■□□□ 1.09
SMC4-222ENST00000490207 ENTPD7Q9NQZ7 604 aa21.88■■□□□ 1.09
SMC4-222ENST00000490207 PUF60Q9UHX1 559 aaKnown RBP21.88■■□□□ 1.09
SMC4-222ENST00000490207 IPPQ9Y573 584 aa21.88■■□□□ 1.09
SMC4-222ENST00000490207 B4GALT5O43286 388 aa21.87■■□□□ 1.09
SMC4-222ENST00000490207 IL9P15248 144 aa21.87■■□□□ 1.09
SMC4-222ENST00000490207 ARF4P18085 180 aaPredicted RBP21.87■■□□□ 1.09
SMC4-222ENST00000490207 ALDH7A1P49419 539 aaKnown RBP21.87■■□□□ 1.09
SMC4-222ENST00000490207 KRT17Q04695 432 aa21.87■■□□□ 1.09
SMC4-222ENST00000490207 PDE12Q6L8Q7 609 aaKnown RBP21.87■■□□□ 1.09
SMC4-222ENST00000490207 RBM23Q86U06 439 aaKnown RBP21.87■■□□□ 1.09
SMC4-222ENST00000490207 EFHBQ8N7U6 833 aa21.87■■□□□ 1.09
SMC4-222ENST00000490207 SMG8Q8ND04 991 aaKnown RBP21.87■■□□□ 1.09
SMC4-222ENST00000490207 BSNDQ8WZ55 320 aa21.87■■□□□ 1.09
SMC4-222ENST00000490207 C2orf40Q9H1Z8 148 aa21.87■■□□□ 1.09
SMC4-222ENST00000490207 PRMT7Q9NVM4 692 aaPredicted RBP21.87■■□□□ 1.09
SMC4-222ENST00000490207 MUC3AQ02505 3323 aa21.86■■□□□ 1.09
SMC4-222ENST00000490207 VPS37CA5D8V6 355 aaPredicted RBP21.86■■□□□ 1.09
SMC4-222ENST00000490207 CARNS1A5YM72 827 aa21.86■■□□□ 1.09
SMC4-222ENST00000490207 NT5C1B-RDH14C9J2C7 533 aa21.86■■□□□ 1.09
SMC4-222ENST00000490207 ITGA4P13612 1032 aa21.86■■□□□ 1.09
SMC4-222ENST00000490207 NDUFV1P49821 464 aa21.86■■□□□ 1.09
SMC4-222ENST00000490207 DLX2Q07687 328 aaPredicted RBP21.86■■□□□ 1.09
SMC4-222ENST00000490207 PPP2R5AQ15172 486 aa21.86■■□□□ 1.09
SMC4-222ENST00000490207 BRAPQ7Z569 592 aa21.86■■□□□ 1.09
SMC4-222ENST00000490207 TMEM169Q96HH4 297 aa21.86■■□□□ 1.09
SMC4-222ENST00000490207 PRIMPOLQ96LW4 560 aa21.86■■□□□ 1.09
SMC4-222ENST00000490207 TCF25Q9BQ70 676 aa21.86■■□□□ 1.09
SMC4-222ENST00000490207 TRIM6Q9C030 488 aaPredicted RBP21.86■■□□□ 1.09
SMC4-222ENST00000490207 GBP3Q9H0R5 595 aa21.86■■□□□ 1.09
SMC4-222ENST00000490207 NRDE2Q9H7Z3 1164 aa21.86■■□□□ 1.09
SMC4-222ENST00000490207 TLE6Q9H808 572 aa21.86■■□□□ 1.09
SMC4-222ENST00000490207 VWA3AA6NCI4 1184 aa21.85■■□□□ 1.09
SMC4-222ENST00000490207 GRXCR2A6NFK2 248 aa21.85■■□□□ 1.09
SMC4-222ENST00000490207 E9PMD0 336 aa21.85■■□□□ 1.09
SMC4-222ENST00000490207 EYA4O95677 639 aa21.85■■□□□ 1.09
SMC4-222ENST00000490207 CDC25AP30304 524 aa21.85■■□□□ 1.09
SMC4-222ENST00000490207 NAMPTP43490 491 aa21.85■■□□□ 1.09
SMC4-222ENST00000490207 ADAM15Q13444 863 aa21.85■■□□□ 1.09
SMC4-222ENST00000490207 CLUL1Q15846 466 aa21.85■■□□□ 1.09
SMC4-222ENST00000490207 ARL6IP4Q66PJ3 421 aaKnown RBP21.85■■□□□ 1.09
SMC4-222ENST00000490207 PPP4R3CPQ6ZMV5 832 aa21.85■■□□□ 1.09
SMC4-222ENST00000490207 HACE1Q8IYU2 909 aa21.85■■□□□ 1.09
SMC4-222ENST00000490207 KIFAP3Q92845 792 aa21.85■■□□□ 1.09
SMC4-222ENST00000490207 MMTAG2Q9BU76 263 aaKnown RBP21.85■■□□□ 1.09
SMC4-222ENST00000490207 UBN1Q9NPG3 1134 aa21.85■■□□□ 1.09
SMC4-222ENST00000490207 DNM3Q9UQ16 869 aa21.85■■□□□ 1.09
SMC4-222ENST00000490207 FAM50BQ9Y247 325 aa21.85■■□□□ 1.09
SMC4-222ENST00000490207 FSD2A1L4K1 749 aa21.84■■□□□ 1.09
SMC4-222ENST00000490207 NPTXRO95502 500 aa21.84■■□□□ 1.09
SMC4-222ENST00000490207 PDCP20941 246 aa21.84■■□□□ 1.09
SMC4-222ENST00000490207 SLC27A1Q6PCB7 646 aa21.84■■□□□ 1.09
SMC4-222ENST00000490207 CDR2LQ86X02 465 aaPredicted RBP21.84■■□□□ 1.09
SMC4-222ENST00000490207 DEPTORQ8TB45 409 aa21.84■■□□□ 1.09
SMC4-222ENST00000490207 IFT74Q96LB3 600 aa21.84■■□□□ 1.09
SMC4-222ENST00000490207 CDCA3Q99618 268 aaPredicted RBP21.84■■□□□ 1.09
SMC4-222ENST00000490207 APOL6Q9BWW8 343 aa21.84■■□□□ 1.09
SMC4-222ENST00000490207 NXF3Q9H4D5 531 aaKnown RBP21.84■■□□□ 1.09
SMC4-222ENST00000490207 NGRNQ9NPE2 291 aaKnown RBP21.84■■□□□ 1.09
SMC4-222ENST00000490207 DNAJB4Q9UDY4 337 aa21.84■■□□□ 1.09
SMC4-222ENST00000490207 HES2Q9Y543 173 aa21.84■■□□□ 1.09
SMC4-222ENST00000490207 MYH11P35749 1972 aa21.83■■□□□ 1.09
SMC4-222ENST00000490207 PER2O15055 1255 aa21.83■■□□□ 1.09
SMC4-222ENST00000490207 B4GALT3O60512 393 aa21.83■■□□□ 1.09
SMC4-222ENST00000490207 PRKCBP05771 671 aa21.83■■□□□ 1.09
SMC4-222ENST00000490207 ZRSR1Q15695 479 aaKnown RBP21.83■■□□□ 1.09
SMC4-222ENST00000490207 DUSP6Q16828 381 aa21.83■■□□□ 1.09
SMC4-222ENST00000490207 FAM187BQ17R55 369 aa21.83■■□□□ 1.09
SMC4-222ENST00000490207 TMC7Q7Z402 723 aa21.83■■□□□ 1.09
SMC4-222ENST00000490207 TMEM173Q86WV6 379 aaPredicted RBP21.83■■□□□ 1.09
SMC4-222ENST00000490207 ZNF280BQ86YH2 543 aa21.83■■□□□ 1.09
SMC4-222ENST00000490207 FAM193BQ96PV7 902 aaPredicted RBP21.83■■□□□ 1.09
SMC4-222ENST00000490207 FZD8Q9H461 694 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms