RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 ACKR2O00590 384 aa13.71□□□□□ -0.21
COL4A5-206ENST00000489230 TRAK2O60296 914 aa13.71□□□□□ -0.21
COL4A5-206ENST00000489230 CSDE1O75534 798 aaKnown RBP13.71□□□□□ -0.21
COL4A5-206ENST00000489230 PBX2P40425 430 aa13.71□□□□□ -0.21
COL4A5-206ENST00000489230 SARSP49591 514 aaKnown RBP13.71□□□□□ -0.21
COL4A5-206ENST00000489230 RAB27AP51159 221 aa13.71□□□□□ -0.21
COL4A5-206ENST00000489230 MBTD1Q05BQ5 628 aa13.71□□□□□ -0.21
COL4A5-206ENST00000489230 RAD51AP2Q09MP3 1159 aa13.71□□□□□ -0.21
COL4A5-206ENST00000489230 STRN3Q13033 797 aa13.71□□□□□ -0.21
COL4A5-206ENST00000489230 MAPK7Q13164 816 aa13.71□□□□□ -0.21
COL4A5-206ENST00000489230 DSC3Q14574 896 aa13.71□□□□□ -0.21
COL4A5-206ENST00000489230 RAB30Q15771 203 aa13.71□□□□□ -0.21
COL4A5-206ENST00000489230 NOTUMQ6P988 496 aa13.71□□□□□ -0.21
COL4A5-206ENST00000489230 PPP4R3CPQ6ZMV5 832 aa13.71□□□□□ -0.21
COL4A5-206ENST00000489230 RTN4RL1Q86UN2 441 aaPredicted RBP13.71□□□□□ -0.21
COL4A5-206ENST00000489230 HERC6Q8IVU3 1022 aa13.71□□□□□ -0.21
COL4A5-206ENST00000489230 DAW1Q8N136 415 aa13.71□□□□□ -0.21
COL4A5-206ENST00000489230 RSPH1Q8WYR4 309 aa13.71□□□□□ -0.21
COL4A5-206ENST00000489230 KCNN1Q92952 543 aa13.71□□□□□ -0.21
COL4A5-206ENST00000489230 GBP4Q96PP9 640 aa13.71□□□□□ -0.21
COL4A5-206ENST00000489230 RAD9AQ99638 391 aa13.71□□□□□ -0.21
COL4A5-206ENST00000489230 ZHX3Q9H4I2 956 aa13.71□□□□□ -0.21
COL4A5-206ENST00000489230 ELAC1Q9H777 363 aaKnown RBP13.71□□□□□ -0.21
COL4A5-206ENST00000489230 POLD4Q9HCU8 107 aa13.71□□□□□ -0.21
COL4A5-206ENST00000489230 AGPAT5Q9NUQ2 364 aa13.71□□□□□ -0.21
COL4A5-206ENST00000489230 MSRAQ9UJ68 235 aa13.71□□□□□ -0.21
COL4A5-206ENST00000489230 HOOK1Q9UJC3 728 aaKnown RBP13.71□□□□□ -0.21
COL4A5-206ENST00000489230 LRFN2Q9ULH4 789 aa13.71□□□□□ -0.21
COL4A5-206ENST00000489230 NPHP3-ACAD11A0A0J9YXS1 232 aa13.7□□□□□ -0.22
COL4A5-206ENST00000489230 A0A0U1RQF3 1178 aa13.7□□□□□ -0.22
COL4A5-206ENST00000489230 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.7□□□□□ -0.22
COL4A5-206ENST00000489230 PVALEFA0A1B0GWK0 134 aa13.7□□□□□ -0.22
COL4A5-206ENST00000489230 GRXCR1A8MXD5 290 aa13.7□□□□□ -0.22
COL4A5-206ENST00000489230 HOXA2O43364 376 aa13.7□□□□□ -0.22
COL4A5-206ENST00000489230 ZNF202O95125 648 aa13.7□□□□□ -0.22
COL4A5-206ENST00000489230 IGFBP4P22692 258 aa13.7□□□□□ -0.22
COL4A5-206ENST00000489230 NDUFA8P51970 172 aa13.7□□□□□ -0.22
COL4A5-206ENST00000489230 PRPF4BQ13523 1007 aaKnown RBP13.7□□□□□ -0.22
COL4A5-206ENST00000489230 LONRF3Q496Y0 759 aa13.7□□□□□ -0.22
COL4A5-206ENST00000489230 HERC4Q5GLZ8 1057 aaPredicted RBP13.7□□□□□ -0.22
COL4A5-206ENST00000489230 TWF2Q6IBS0 349 aaKnown RBP13.7□□□□□ -0.22
COL4A5-206ENST00000489230 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.7□□□□□ -0.222e-6■■■■□ 23.7
COL4A5-206ENST00000489230 STXBP4Q6ZWJ1 553 aa13.7□□□□□ -0.22
COL4A5-206ENST00000489230 DYMQ7RTS9 669 aa13.7□□□□□ -0.22
COL4A5-206ENST00000489230 NPAS4Q8IUM7 802 aa13.7□□□□□ -0.22
COL4A5-206ENST00000489230 FAM178BQ8IXR5 827 aa13.7□□□□□ -0.22
COL4A5-206ENST00000489230 HACE1Q8IYU2 909 aa13.7□□□□□ -0.22
COL4A5-206ENST00000489230 MYOCDQ8IZQ8 938 aa13.7□□□□□ -0.22
COL4A5-206ENST00000489230 TMEM87AQ8NBN3 555 aa13.7□□□□□ -0.22
COL4A5-206ENST00000489230 LRRC15Q8TF66 581 aa13.7□□□□□ -0.22
COL4A5-206ENST00000489230 BSNDQ8WZ55 320 aa13.7□□□□□ -0.22
COL4A5-206ENST00000489230 PGBD4Q96DM1 585 aa13.7□□□□□ -0.22
COL4A5-206ENST00000489230 ASB2Q96Q27 587 aa13.7□□□□□ -0.22
COL4A5-206ENST00000489230 MINDY3Q9H8M7 445 aa13.7□□□□□ -0.22
COL4A5-206ENST00000489230 UBN1Q9NPG3 1134 aa13.7□□□□□ -0.22
COL4A5-206ENST00000489230 PANK4Q9NVE7 773 aa13.7□□□□□ -0.22
COL4A5-206ENST00000489230 PIN4Q9Y237 131 aaKnown RBP13.7□□□□□ -0.22
COL4A5-206ENST00000489230 INSL6Q9Y581 213 aa13.7□□□□□ -0.22
COL4A5-206ENST00000489230 PCDHB13Q9Y5F0 798 aa13.7□□□□□ -0.22
COL4A5-206ENST00000489230 PCDHA11Q9Y5I1 949 aa13.7□□□□□ -0.22
COL4A5-206ENST00000489230 A0A1B0GUA9 196 aa13.69□□□□□ -0.22
COL4A5-206ENST00000489230 C9IYK1 514 aa13.69□□□□□ -0.22
COL4A5-206ENST00000489230 GOLGA6L22H0YM25 854 aa13.69□□□□□ -0.22
COL4A5-206ENST00000489230 SLC16A4O15374 487 aa13.69□□□□□ -0.22
COL4A5-206ENST00000489230 ZNF623O75123 536 aa13.69□□□□□ -0.22
COL4A5-206ENST00000489230 GJB5O95377 273 aa13.69□□□□□ -0.22
COL4A5-206ENST00000489230 IDEP14735 1019 aa13.69□□□□□ -0.22
COL4A5-206ENST00000489230 FGFR4P22455 802 aa13.69□□□□□ -0.22
COL4A5-206ENST00000489230 HOXA11P31270 313 aaPredicted RBP13.69□□□□□ -0.22
COL4A5-206ENST00000489230 UBE2HP62256 183 aa13.69□□□□□ -0.22
COL4A5-206ENST00000489230 MRPS5P82675 430 aaKnown RBP13.69□□□□□ -0.22
COL4A5-206ENST00000489230 FAM160A1Q05DH4 1040 aa13.69□□□□□ -0.22
COL4A5-206ENST00000489230 ALCAMQ13740 583 aa13.69□□□□□ -0.22
COL4A5-206ENST00000489230 CCDC85BQ15834 202 aaPredicted RBP13.69□□□□□ -0.22
COL4A5-206ENST00000489230 TMEM132AQ24JP5 1023 aa13.69□□□□□ -0.22
COL4A5-206ENST00000489230 TCTN1Q2MV58 587 aa13.69□□□□□ -0.22
COL4A5-206ENST00000489230 HAUS6Q7Z4H7 955 aa13.69□□□□□ -0.22
COL4A5-206ENST00000489230 ADAMTS19Q8TE59 1207 aa13.69□□□□□ -0.22
COL4A5-206ENST00000489230 CCDC47Q96A33 483 aaKnown RBP13.69□□□□□ -0.22
COL4A5-206ENST00000489230 DNAJC19Q96DA6 116 aa13.69□□□□□ -0.22
COL4A5-206ENST00000489230 PAGE5Q96GU1 130 aa13.69□□□□□ -0.22
COL4A5-206ENST00000489230 TIGD1Q96MW7 591 aa13.69□□□□□ -0.22
COL4A5-206ENST00000489230 UHRF1Q96T88 793 aaPredicted RBP13.69□□□□□ -0.22
COL4A5-206ENST00000489230 MRPL4Q9BYD3 311 aaKnown RBP13.69□□□□□ -0.22
COL4A5-206ENST00000489230 TRIM9Q9C026 710 aa13.69□□□□□ -0.22
COL4A5-206ENST00000489230 ST6GALNAC4Q9H4F1 302 aa13.69□□□□□ -0.22
COL4A5-206ENST00000489230 TMEM161AQ9NX61 479 aa13.69□□□□□ -0.22
COL4A5-206ENST00000489230 ARHGAP28Q9P2N2 729 aa13.69□□□□□ -0.22
COL4A5-206ENST00000489230 SERTAD1Q9UHV2 236 aa13.69□□□□□ -0.22
COL4A5-206ENST00000489230 TANC1Q9C0D5 1861 aa13.68□□□□□ -0.22
COL4A5-206ENST00000489230 N4BP3O15049 544 aa13.68□□□□□ -0.22
COL4A5-206ENST00000489230 TLL1O43897 1013 aa13.68□□□□□ -0.22
COL4A5-206ENST00000489230 TSPAN1O60635 241 aa13.68□□□□□ -0.22
COL4A5-206ENST00000489230 PRKCBP05771 671 aa13.68□□□□□ -0.22
COL4A5-206ENST00000489230 NCKAP1LP55160 1127 aa13.68□□□□□ -0.22
COL4A5-206ENST00000489230 PSMD2Q13200 908 aa13.68□□□□□ -0.22
COL4A5-206ENST00000489230 TPRNQ4KMQ1 711 aa13.68□□□□□ -0.22
COL4A5-206ENST00000489230 SLC27A1Q6PCB7 646 aa13.68□□□□□ -0.22
COL4A5-206ENST00000489230 KRBA2Q6ZNG9 492 aa13.68□□□□□ -0.22
COL4A5-206ENST00000489230 ZNF720Q7Z2F6 126 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms