RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 SRBD1Q8N5C6 995 aaKnown RBP18.73■□□□□ 0.59
NPHP4-209ENST00000489180 GIPC2Q8TF65 315 aa18.73■□□□□ 0.59
NPHP4-209ENST00000489180 ARL8AQ96BM9 186 aa18.73■□□□□ 0.59
NPHP4-209ENST00000489180 CEP19Q96LK0 163 aa18.73■□□□□ 0.59
NPHP4-209ENST00000489180 FAM20AQ96MK3 541 aa18.73■□□□□ 0.59
NPHP4-209ENST00000489180 LXNQ9BS40 222 aa18.73■□□□□ 0.59
NPHP4-209ENST00000489180 YY1AP1Q9H869 796 aa18.73■□□□□ 0.59
NPHP4-209ENST00000489180 SUN2Q9UH99 717 aa18.73■□□□□ 0.59
NPHP4-209ENST00000489180 PAMP19021 973 aa18.73■□□□□ 0.59
NPHP4-209ENST00000489180 QRICH1Q2TAL8 776 aa18.73■□□□□ 0.59
NPHP4-209ENST00000489180 L3MBTL1Q9Y468 752 aa18.73■□□□□ 0.59
NPHP4-209ENST00000489180 FAM187AA6NFU0 413 aa18.73■□□□□ 0.59
NPHP4-209ENST00000489180 FOXO4P98177 505 aa18.73■□□□□ 0.59
NPHP4-209ENST00000489180 LMBRD2Q68DH5 695 aaPredicted RBP18.73■□□□□ 0.59
NPHP4-209ENST00000489180 SWSAP1Q6NVH7 229 aa18.73■□□□□ 0.59
NPHP4-209ENST00000489180 RNPC3Q96LT9 517 aaKnown RBP18.73■□□□□ 0.59
NPHP4-209ENST00000489180 WNT8AQ9H1J5 351 aa18.73■□□□□ 0.59
NPHP4-209ENST00000489180 TARSL2A2RTX5 802 aaKnown RBP18.73■□□□□ 0.59
NPHP4-209ENST00000489180 KPNA7A9QM74 516 aa18.73■□□□□ 0.59
NPHP4-209ENST00000489180 NPR1P16066 1061 aa18.73■□□□□ 0.59
NPHP4-209ENST00000489180 KRT39Q6A163 491 aa18.73■□□□□ 0.59
NPHP4-209ENST00000489180 RCSD1Q6JBY9 416 aa18.73■□□□□ 0.59
NPHP4-209ENST00000489180 EIF2AK1Q9BQI3 630 aaKnown RBP18.73■□□□□ 0.59
NPHP4-209ENST00000489180 IP6K2Q9UHH9 426 aa18.73■□□□□ 0.59
NPHP4-209ENST00000489180 ARHGAP31Q2M1Z3 1444 aa18.73■□□□□ 0.59
NPHP4-209ENST00000489180 MAPK6Q16659 721 aa18.72■□□□□ 0.59
NPHP4-209ENST00000489180 MCPH1Q8NEM0 835 aa18.72■□□□□ 0.59
NPHP4-209ENST00000489180 TRIM51Q9BSJ1 452 aa18.72■□□□□ 0.59
NPHP4-209ENST00000489180 SLITRK6Q9H5Y7 841 aa18.72■□□□□ 0.59
NPHP4-209ENST00000489180 KLC4Q9NSK0 619 aa18.72■□□□□ 0.59
NPHP4-209ENST00000489180 ADA2Q9NZK5 511 aa18.72■□□□□ 0.59
NPHP4-209ENST00000489180 GABBR1Q9UBS5 961 aa18.72■□□□□ 0.59
NPHP4-209ENST00000489180 WARS2Q9UGM6 360 aaKnown RBP18.72■□□□□ 0.59
NPHP4-209ENST00000489180 AP1B1Q10567 949 aa18.72■□□□□ 0.59
NPHP4-209ENST00000489180 NFX1Q12986 1120 aaKnown RBP18.72■□□□□ 0.59
NPHP4-209ENST00000489180 NAALADL2Q58DX5 795 aa18.72■□□□□ 0.59
NPHP4-209ENST00000489180 NUDCD3Q8IVD9 361 aa18.72■□□□□ 0.59
NPHP4-209ENST00000489180 MTRQ99707 1265 aa18.72■□□□□ 0.59
NPHP4-209ENST00000489180 LBHD1Q9BQE6 289 aaPredicted RBP18.72■□□□□ 0.59
NPHP4-209ENST00000489180 SNX12Q9UMY4 172 aa18.72■□□□□ 0.59
NPHP4-209ENST00000489180 AXIN2Q9Y2T1 843 aa18.72■□□□□ 0.59
NPHP4-209ENST00000489180 EXOSC10Q01780 885 aaKnown RBP18.72■□□□□ 0.59
NPHP4-209ENST00000489180 CYFIP1Q7L576 1253 aa18.72■□□□□ 0.59
NPHP4-209ENST00000489180 RFFLQ8WZ73 363 aa18.72■□□□□ 0.59
NPHP4-209ENST00000489180 POLR3CQ9BUI4 534 aaPredicted RBP18.72■□□□□ 0.59
NPHP4-209ENST00000489180 CD209Q9NNX6 404 aa18.72■□□□□ 0.59
NPHP4-209ENST00000489180 MDH1BQ5I0G3 518 aa18.72■□□□□ 0.59
NPHP4-209ENST00000489180 FRA10AC1Q70Z53 315 aa18.72■□□□□ 0.59
NPHP4-209ENST00000489180 RIN2Q8WYP3 895 aaPredicted RBP18.72■□□□□ 0.59
NPHP4-209ENST00000489180 SCHIP1Q9P0W5 487 aaPredicted RBP18.72■□□□□ 0.59
NPHP4-209ENST00000489180 RFX7Q2KHR2 1363 aa18.72■□□□□ 0.59
NPHP4-209ENST00000489180 NPHP4O75161 1426 aaPredicted RBP18.72■□□□□ 0.59
NPHP4-209ENST00000489180 GOLGA8RI6L899 631 aa18.72■□□□□ 0.59
NPHP4-209ENST00000489180 E2F6O75461 281 aa18.72■□□□□ 0.59
NPHP4-209ENST00000489180 RCAN1P53805 252 aa18.72■□□□□ 0.59
NPHP4-209ENST00000489180 ROR1Q01973 937 aa18.72■□□□□ 0.59
NPHP4-209ENST00000489180 PPP1R18Q6NYC8 613 aa18.72■□□□□ 0.59
NPHP4-209ENST00000489180 ATXN7L3BQ96GX2 97 aa18.72■□□□□ 0.59
NPHP4-209ENST00000489180 POLR3FQ9H1D9 316 aaPredicted RBP18.72■□□□□ 0.59
NPHP4-209ENST00000489180 SLC9A2Q9UBY0 812 aa18.72■□□□□ 0.59
NPHP4-209ENST00000489180 TSR3Q9UJK0 312 aaKnown RBP18.72■□□□□ 0.59
NPHP4-209ENST00000489180 MROH7-TTC4A0A0A0MT08 1334 aa18.71■□□□□ 0.59
NPHP4-209ENST00000489180 TCP11X1B4DZS4 312 aa18.71■□□□□ 0.59
NPHP4-209ENST00000489180 CYP26A1O43174 497 aa18.71■□□□□ 0.59
NPHP4-209ENST00000489180 NMT1P30419 496 aaKnown RBP18.71■□□□□ 0.59
NPHP4-209ENST00000489180 ZBTB17Q13105 803 aa18.71■□□□□ 0.59
NPHP4-209ENST00000489180 MKRN4PQ13434 485 aaPredicted RBP18.71■□□□□ 0.59
NPHP4-209ENST00000489180 DRP2Q13474 957 aa18.71■□□□□ 0.59
NPHP4-209ENST00000489180 ALX1Q15699 326 aa18.71■□□□□ 0.59
NPHP4-209ENST00000489180 RHPN2Q8IUC4 686 aa18.71■□□□□ 0.59
NPHP4-209ENST00000489180 KIAA1586Q9HCI6 787 aa18.71■□□□□ 0.59
NPHP4-209ENST00000489180 STRIP2Q9ULQ0 834 aa18.71■□□□□ 0.59
NPHP4-209ENST00000489180 EDEM3Q9BZQ6 932 aa18.71■□□□□ 0.59
NPHP4-209ENST00000489180 AGPAT5Q9NUQ2 364 aa18.71■□□□□ 0.59
NPHP4-209ENST00000489180 A0A1B0GTH6 734 aa18.71■□□□□ 0.59
NPHP4-209ENST00000489180 C21orf2O43822 256 aa18.71■□□□□ 0.59
NPHP4-209ENST00000489180 HADHAP40939 763 aa18.71■□□□□ 0.59
NPHP4-209ENST00000489180 AP2B1P63010 937 aa18.71■□□□□ 0.59
NPHP4-209ENST00000489180 SNRNP48Q6IEG0 339 aaKnown RBP18.71■□□□□ 0.59
NPHP4-209ENST00000489180 SGMS1Q86VZ5 419 aa18.71■□□□□ 0.59
NPHP4-209ENST00000489180 RHOT1Q8IXI2 618 aa18.71■□□□□ 0.59
NPHP4-209ENST00000489180 PDCD6IPQ8WUM4 868 aaKnown RBP18.71■□□□□ 0.59
NPHP4-209ENST00000489180 CYP26B1Q9NR63 512 aa18.71■□□□□ 0.59
NPHP4-209ENST00000489180 PAPOLAP51003 745 aaKnown RBP18.71■□□□□ 0.59
NPHP4-209ENST00000489180 ARSEP51690 589 aa18.71■□□□□ 0.59
NPHP4-209ENST00000489180 ARHGDIAP52565 204 aa18.71■□□□□ 0.59
NPHP4-209ENST00000489180 STXBP2Q15833 593 aa18.71■□□□□ 0.59
NPHP4-209ENST00000489180 SLC26A7Q8TE54 656 aa18.71■□□□□ 0.59
NPHP4-209ENST00000489180 AGPAT1Q99943 283 aa18.71■□□□□ 0.59
NPHP4-209ENST00000489180 SHROOM2Q13796 1616 aa18.71■□□□□ 0.59
NPHP4-209ENST00000489180 ASNSP08243 561 aa18.7■□□□□ 0.58
NPHP4-209ENST00000489180 SDC4P31431 198 aa18.7■□□□□ 0.58
NPHP4-209ENST00000489180 ZBTB18Q99592 522 aa18.7■□□□□ 0.58
NPHP4-209ENST00000489180 TBC1D22BQ9NU19 505 aa18.7■□□□□ 0.58
NPHP4-209ENST00000489180 P4HBP07237 508 aaKnown RBP18.7■□□□□ 0.58
NPHP4-209ENST00000489180 MYL3P08590 195 aa18.7■□□□□ 0.58
NPHP4-209ENST00000489180 QARSP47897 775 aaKnown RBP18.7■□□□□ 0.58
NPHP4-209ENST00000489180 OR2W6PQ8NHA6 318 aa18.7■□□□□ 0.58
NPHP4-209ENST00000489180 PPP1R36Q96LQ0 422 aa18.7■□□□□ 0.58
NPHP4-209ENST00000489180 ZNF302Q9NR11 478 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms