RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 SWAP70Q9UH65 585 aa9.46□□□□□ -0.9
TRAPPC12-221ENST00000489032 RAPGEFL1Q9UHV5 662 aa9.46□□□□□ -0.9
TRAPPC12-221ENST00000489032 CPA4Q9UI42 421 aa9.46□□□□□ -0.9
TRAPPC12-221ENST00000489032 DUSP13Q9UII6 198 aa9.46□□□□□ -0.9
TRAPPC12-221ENST00000489032 SERPINB13Q9UIV8 391 aa9.46□□□□□ -0.9
TRAPPC12-221ENST00000489032 CCDC171Q6TFL3 1326 aa9.46□□□□□ -0.9
TRAPPC12-221ENST00000489032 SPTBN5Q9NRC6 3674 aaKnown RBP9.46□□□□□ -0.9
TRAPPC12-221ENST00000489032 PRUNE2Q8WUY3 3088 aa9.45□□□□□ -0.9
TRAPPC12-221ENST00000489032 FOCADQ5VW36 1801 aa9.45□□□□□ -0.9
TRAPPC12-221ENST00000489032 NAV1Q8NEY1 1877 aa9.45□□□□□ -0.9
TRAPPC12-221ENST00000489032 MYH1P12882 1939 aa9.45□□□□□ -0.9
TRAPPC12-221ENST00000489032 SHISA3A0PJX4 238 aa9.45□□□□□ -0.9
TRAPPC12-221ENST00000489032 FAM221BA6H8Z2 402 aa9.45□□□□□ -0.9
TRAPPC12-221ENST00000489032 GSG1L2A8MUP6 293 aa9.45□□□□□ -0.9
TRAPPC12-221ENST00000489032 CTNND1O60716 968 aaKnown RBP9.45□□□□□ -0.9
TRAPPC12-221ENST00000489032 GSNP06396 782 aa9.45□□□□□ -0.9
TRAPPC12-221ENST00000489032 SRFP11831 508 aa9.45□□□□□ -0.9
TRAPPC12-221ENST00000489032 SYN1P17600 705 aa9.45□□□□□ -0.9
TRAPPC12-221ENST00000489032 NOP2P46087 812 aaKnown RBP9.45□□□□□ -0.9
TRAPPC12-221ENST00000489032 PRKCZQ05513 592 aa9.45□□□□□ -0.9
TRAPPC12-221ENST00000489032 SSRP1Q08945 709 aaKnown RBP9.45□□□□□ -0.9
TRAPPC12-221ENST00000489032 SNAPC2Q13487 334 aa9.45□□□□□ -0.9
TRAPPC12-221ENST00000489032 SLC10A6Q3KNW5 377 aa9.45□□□□□ -0.9
TRAPPC12-221ENST00000489032 CCDC129Q6ZRS4 1044 aa9.45□□□□□ -0.9
TRAPPC12-221ENST00000489032 TMPRSS7Q7RTY8 843 aa9.45□□□□□ -0.9
TRAPPC12-221ENST00000489032 MAFAQ8NHW3 353 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC12-221ENST00000489032 ZNF669Q96BR6 464 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC12-221ENST00000489032 RCC1LQ96I51 464 aaKnown RBP9.45□□□□□ -0.9
TRAPPC12-221ENST00000489032 PFDN2Q9UHV9 154 aa9.45□□□□□ -0.9
TRAPPC12-221ENST00000489032 ZNF112Q9UJU3 913 aa9.45□□□□□ -0.9
TRAPPC12-221ENST00000489032 SLC5A6Q9Y289 635 aa9.45□□□□□ -0.9
TRAPPC12-221ENST00000489032 RAD50Q92878 1312 aa9.45□□□□□ -0.9
TRAPPC12-221ENST00000489032 CDK5RAP2Q96SN8 1893 aa9.45□□□□□ -0.9
TRAPPC12-221ENST00000489032 ADCY3O60266 1144 aa9.44□□□□□ -0.9
TRAPPC12-221ENST00000489032 CHMLP26374 656 aa9.44□□□□□ -0.9
TRAPPC12-221ENST00000489032 PLCD1P51178 756 aa9.44□□□□□ -0.9
TRAPPC12-221ENST00000489032 PCBP3P57721 371 aaKnown RBP9.44□□□□□ -0.9
TRAPPC12-221ENST00000489032 POU4F1Q01851 419 aa9.44□□□□□ -0.9
TRAPPC12-221ENST00000489032 IKZF1Q13422 519 aa9.44□□□□□ -0.9
TRAPPC12-221ENST00000489032 MSMPQ1L6U9 139 aa9.44□□□□□ -0.9
TRAPPC12-221ENST00000489032 CERKLQ49MI3 558 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC12-221ENST00000489032 SBK1Q52WX2 424 aa9.44□□□□□ -0.9
TRAPPC12-221ENST00000489032 C12orf60Q5U649 245 aa9.44□□□□□ -0.9
TRAPPC12-221ENST00000489032 CTR9Q6PD62 1173 aa9.44□□□□□ -0.9
TRAPPC12-221ENST00000489032 SKAP1Q86WV1 359 aa9.44□□□□□ -0.9
TRAPPC12-221ENST00000489032 ERO1BQ86YB8 467 aa9.44□□□□□ -0.9
TRAPPC12-221ENST00000489032 CREG2Q8IUH2 290 aa9.44□□□□□ -0.9
TRAPPC12-221ENST00000489032 SCYL3Q8IZE3 742 aa9.44□□□□□ -0.9
TRAPPC12-221ENST00000489032 ZKSCAN4Q969J2 545 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC12-221ENST00000489032 DNAJC7Q99615 494 aa9.44□□□□□ -0.9
TRAPPC12-221ENST00000489032 HDAC8Q9BY41 377 aa9.44□□□□□ -0.9
TRAPPC12-221ENST00000489032 PIF1Q9H611 641 aa9.44□□□□□ -0.9
TRAPPC12-221ENST00000489032 AS3MTQ9HBK9 375 aa9.44□□□□□ -0.9
TRAPPC12-221ENST00000489032 CABP5Q9NP86 173 aa9.44□□□□□ -0.9
TRAPPC12-221ENST00000489032 SEMA3GQ9NS98 782 aa9.44□□□□□ -0.9
TRAPPC12-221ENST00000489032 SUSD2Q9UGT4 822 aa9.44□□□□□ -0.9
TRAPPC12-221ENST00000489032 ADGRA2Q96PE1 1338 aa9.44□□□□□ -0.9
TRAPPC12-221ENST00000489032 MGAMO43451 1857 aa9.44□□□□□ -0.9
TRAPPC12-221ENST00000489032 RBAK-RBAKDNI3L0D1 243 aa9.43□□□□□ -0.9
TRAPPC12-221ENST00000489032 ADAM23O75077 832 aa9.43□□□□□ -0.9
TRAPPC12-221ENST00000489032 CDC45O75419 566 aa9.43□□□□□ -0.9
TRAPPC12-221ENST00000489032 ASNSP08243 561 aa9.43□□□□□ -0.9
TRAPPC12-221ENST00000489032 CYP2D6P10635 497 aa9.43□□□□□ -0.9
TRAPPC12-221ENST00000489032 HSPD1P10809 573 aaKnown RBP9.43□□□□□ -0.9
TRAPPC12-221ENST00000489032 PPATQ06203 517 aa9.43□□□□□ -0.9
TRAPPC12-221ENST00000489032 ALX1Q15699 326 aa9.43□□□□□ -0.9
TRAPPC12-221ENST00000489032 DIS3LQ8TF46 1054 aaKnown RBP9.43□□□□□ -0.9
TRAPPC12-221ENST00000489032 TCTN2Q96GX1 697 aa9.43□□□□□ -0.9
TRAPPC12-221ENST00000489032 SGSM3Q96HU1 749 aa9.43□□□□□ -0.9
TRAPPC12-221ENST00000489032 ATP13A1Q9HD20 1204 aa9.43□□□□□ -0.9
TRAPPC12-221ENST00000489032 PAK6Q9NQU5 681 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC12-221ENST00000489032 APEX2Q9UBZ4 518 aa9.43□□□□□ -0.9
TRAPPC12-221ENST00000489032 CGGBP1Q9UFW8 167 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC12-221ENST00000489032 CTNNA3Q9UI47 895 aa9.43□□□□□ -0.9
TRAPPC12-221ENST00000489032 LAMA2P24043 3122 aaKnown RBP9.42□□□□□ -0.9
TRAPPC12-221ENST00000489032 ZMYM6O95789 1325 aa9.42□□□□□ -0.9
TRAPPC12-221ENST00000489032 MPHOSPH10O00566 681 aaKnown RBP9.42□□□□□ -0.9
TRAPPC12-221ENST00000489032 AMPD2Q01433 879 aa9.42□□□□□ -0.9
TRAPPC12-221ENST00000489032 GABPAQ06546 454 aa9.42□□□□□ -0.9
TRAPPC12-221ENST00000489032 PPARAQ07869 468 aa9.42□□□□□ -0.9
TRAPPC12-221ENST00000489032 PPIL2Q13356 520 aa9.42□□□□□ -0.9
TRAPPC12-221ENST00000489032 ABCB5Q2M3G0 1257 aa9.42□□□□□ -0.9
TRAPPC12-221ENST00000489032 VPS53Q5VIR6 699 aa9.42□□□□□ -0.9
TRAPPC12-221ENST00000489032 C16orf86Q6ZW13 317 aa9.42□□□□□ -0.9
TRAPPC12-221ENST00000489032 ANKRD23Q86SG2 305 aa9.42□□□□□ -0.9
TRAPPC12-221ENST00000489032 ZNF589Q86UQ0 364 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC12-221ENST00000489032 ARHGEF39Q8N4T4 335 aa9.42□□□□□ -0.9
TRAPPC12-221ENST00000489032 CCDC17Q96LX7 622 aa9.42□□□□□ -0.9
TRAPPC12-221ENST00000489032 IPO9Q96P70 1041 aaKnown RBP9.42□□□□□ -0.9
TRAPPC12-221ENST00000489032 CDX2Q99626 313 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC12-221ENST00000489032 EPB41L4AQ9HCS5 686 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC12-221ENST00000489032 PCMTD2Q9NV79 361 aa9.42□□□□□ -0.9
TRAPPC12-221ENST00000489032 ZMYM5Q9UJ78 669 aa9.42□□□□□ -0.9
TRAPPC12-221ENST00000489032 GABRQQ9UN88 632 aa9.42□□□□□ -0.9
TRAPPC12-221ENST00000489032 BAZ2AQ9UIF9 1905 aaKnown RBP9.41□□□□□ -0.9
TRAPPC12-221ENST00000489032 CYP2D7A0A087X1C5 515 aa9.41□□□□□ -0.9
TRAPPC12-221ENST00000489032 PDHXO00330 501 aa9.41□□□□□ -0.9
TRAPPC12-221ENST00000489032 ZNF213O14771 459 aa9.41□□□□□ -0.9
TRAPPC12-221ENST00000489032 SGSM2O43147 1006 aa9.41□□□□□ -0.9
TRAPPC12-221ENST00000489032 KCNH1O95259 989 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms