RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 WDR66Q8TBY9 1149 aa5.16□□□□□ -1.58
RFC4-213ENST00000489028 TSPEARQ8WU66 669 aa5.16□□□□□ -1.58
RFC4-213ENST00000489028 RSAD2Q8WXG1 361 aa5.16□□□□□ -1.58
RFC4-213ENST00000489028 FAM89AQ96GI7 184 aa5.16□□□□□ -1.58
RFC4-213ENST00000489028 ORAI2Q96SN7 254 aa5.16□□□□□ -1.58
RFC4-213ENST00000489028 ZNF747Q9BV97 191 aa5.16□□□□□ -1.58
RFC4-213ENST00000489028 C14orf119Q9NWQ9 140 aa5.16□□□□□ -1.58
RFC4-213ENST00000489028 KCNG1Q9UIX4 513 aa5.16□□□□□ -1.58
RFC4-213ENST00000489028 RCAN3Q9UKA8 241 aa5.16□□□□□ -1.58
RFC4-213ENST00000489028 GOLGA8AA7E2F4 631 aa5.15□□□□□ -1.59
RFC4-213ENST00000489028 NRP2O60462 931 aa5.15□□□□□ -1.59
RFC4-213ENST00000489028 XPAP23025 273 aaPredicted RBP5.15□□□□□ -1.59
RFC4-213ENST00000489028 ACRV1P26436 265 aa5.15□□□□□ -1.59
RFC4-213ENST00000489028 HIBADHP31937 336 aaKnown RBP5.15□□□□□ -1.59
RFC4-213ENST00000489028 CASRP41180 1078 aa5.15□□□□□ -1.59
RFC4-213ENST00000489028 ERVK-21P61565 698 aa5.15□□□□□ -1.59
RFC4-213ENST00000489028 SPIDRQ14159 915 aa5.15□□□□□ -1.59
RFC4-213ENST00000489028 USP39Q53GS9 565 aaKnown RBP5.15□□□□□ -1.59
RFC4-213ENST00000489028 LMBR1LQ6UX01 489 aa5.15□□□□□ -1.59
RFC4-213ENST00000489028 ABHD15Q6UXT9 468 aa5.15□□□□□ -1.59
RFC4-213ENST00000489028 RNF207Q6ZRF8 634 aa5.15□□□□□ -1.59
RFC4-213ENST00000489028 Q6ZRM9 215 aa5.15□□□□□ -1.59
RFC4-213ENST00000489028 SGMS1Q86VZ5 419 aa5.15□□□□□ -1.59
RFC4-213ENST00000489028 DDX42Q86XP3 938 aaKnown RBP eCLIP5.15□□□□□ -1.59
RFC4-213ENST00000489028 SPATS2Q86XZ4 545 aaKnown RBP5.15□□□□□ -1.59
RFC4-213ENST00000489028 GLB1L2Q8IW92 636 aa5.15□□□□□ -1.59
RFC4-213ENST00000489028 Q8N1X5 172 aa5.15□□□□□ -1.59
RFC4-213ENST00000489028 LILRA3Q8N6C8 439 aaPredicted RBP5.15□□□□□ -1.59
RFC4-213ENST00000489028 IL17DQ8TAD2 202 aa5.15□□□□□ -1.59
RFC4-213ENST00000489028 BORCS6Q96GS4 357 aa5.15□□□□□ -1.59
RFC4-213ENST00000489028 ACAP3Q96P50 834 aa5.15□□□□□ -1.59
RFC4-213ENST00000489028 MPHOSPH9Q99550 1183 aa5.15□□□□□ -1.59
RFC4-213ENST00000489028 QRSL1Q9H0R6 528 aaKnown RBP5.15□□□□□ -1.59
RFC4-213ENST00000489028 SPC25Q9HBM1 224 aa5.15□□□□□ -1.59
RFC4-213ENST00000489028 DPP7Q9UHL4 492 aa5.15□□□□□ -1.59
RFC4-213ENST00000489028 DNAJC6O75061 913 aa5.14□□□□□ -1.59
RFC4-213ENST00000489028 LTA4HP09960 611 aaKnown RBP5.14□□□□□ -1.59
RFC4-213ENST00000489028 GPR3P46089 330 aa5.14□□□□□ -1.59
RFC4-213ENST00000489028 SCNN1GP51170 649 aa5.14□□□□□ -1.59
RFC4-213ENST00000489028 NRG3P56975 720 aa5.14□□□□□ -1.59
RFC4-213ENST00000489028 CCT2P78371 535 aaKnown RBP5.14□□□□□ -1.59
RFC4-213ENST00000489028 DGCR2P98153 550 aa5.14□□□□□ -1.59
RFC4-213ENST00000489028 ELAVL1Q15717 326 aaKnown RBP5.14□□□□□ -1.59
RFC4-213ENST00000489028 FKBP15Q5T1M5 1219 aa5.14□□□□□ -1.59
RFC4-213ENST00000489028 C1QL3Q5VWW1 255 aa5.14□□□□□ -1.59
RFC4-213ENST00000489028 KCNK18Q7Z418 384 aa5.14□□□□□ -1.59
RFC4-213ENST00000489028 ELOA2Q8IYF1 753 aaPredicted RBP5.14□□□□□ -1.59
RFC4-213ENST00000489028 ATL2Q8NHH9 583 aa5.14□□□□□ -1.59
RFC4-213ENST00000489028 ZNF512Q96ME7 567 aaPredicted RBP5.14□□□□□ -1.59
RFC4-213ENST00000489028 TRIM8Q9BZR9 551 aa5.14□□□□□ -1.59
RFC4-213ENST00000489028 PHLDB1Q86UU1 1377 aa5.14□□□□□ -1.59
RFC4-213ENST00000489028 KRTAP23-1A1A580 65 aa5.13□□□□□ -1.59
RFC4-213ENST00000489028 AMHP03971 560 aa5.13□□□□□ -1.59
RFC4-213ENST00000489028 C1SP09871 688 aa5.13□□□□□ -1.59
RFC4-213ENST00000489028 CTSSP25774 331 aa5.13□□□□□ -1.59
RFC4-213ENST00000489028 CANXP27824 592 aaKnown RBP5.13□□□□□ -1.59
RFC4-213ENST00000489028 RABGGTBP53611 331 aa5.13□□□□□ -1.59
RFC4-213ENST00000489028 NPEPPSP55786 919 aa5.13□□□□□ -1.59
RFC4-213ENST00000489028 CDK17Q00537 523 aa5.13□□□□□ -1.59
RFC4-213ENST00000489028 SRSF2Q01130 221 aaKnown RBP5.13□□□□□ -1.59
RFC4-213ENST00000489028 HHEXQ03014 270 aa5.13□□□□□ -1.59
RFC4-213ENST00000489028 RRP1BQ14684 758 aaKnown RBP5.13□□□□□ -1.59
RFC4-213ENST00000489028 NRN1LQ496H8 165 aa5.13□□□□□ -1.59
RFC4-213ENST00000489028 TOR2AQ5JU69 321 aa5.13□□□□□ -1.59
RFC4-213ENST00000489028 RNF219Q5W0B1 726 aaPredicted RBP5.13□□□□□ -1.59
RFC4-213ENST00000489028 CRIP3Q6Q6R5 217 aa5.13□□□□□ -1.59
RFC4-213ENST00000489028 ARL8AQ96BM9 186 aa5.13□□□□□ -1.59
RFC4-213ENST00000489028 ZNF503Q96F45 646 aa5.13□□□□□ -1.59
RFC4-213ENST00000489028 AHCYL2Q96HN2 611 aaKnown RBP5.13□□□□□ -1.59
RFC4-213ENST00000489028 VPS11Q9H270 941 aa5.13□□□□□ -1.59
RFC4-213ENST00000489028 KLRG2A4D1S0 409 aaPredicted RBP5.12□□□□□ -1.59
RFC4-213ENST00000489028 NRP1O14786 923 aa5.12□□□□□ -1.59
RFC4-213ENST00000489028 PRAMEF4O60810 478 aa5.12□□□□□ -1.59
RFC4-213ENST00000489028 CPEP16870 476 aa5.12□□□□□ -1.59
RFC4-213ENST00000489028 CDKN1CP49918 316 aaPredicted RBP5.12□□□□□ -1.59
RFC4-213ENST00000489028 MRPS9P82933 396 aaKnown RBP5.12□□□□□ -1.59
RFC4-213ENST00000489028 ZXDAP98168 799 aa5.12□□□□□ -1.59
RFC4-213ENST00000489028 AMPD3Q01432 767 aa5.12□□□□□ -1.59
RFC4-213ENST00000489028 MUM1Q2TAK8 710 aa5.12□□□□□ -1.59
RFC4-213ENST00000489028 IGFL4Q6B9Z1 124 aa5.12□□□□□ -1.59
RFC4-213ENST00000489028 C1orf210Q8IVY1 113 aa5.12□□□□□ -1.59
RFC4-213ENST00000489028 MB21D1Q8N884 522 aa5.12□□□□□ -1.59
RFC4-213ENST00000489028 MIEF2Q96C03 454 aa5.12□□□□□ -1.59
RFC4-213ENST00000489028 RAX2Q96IS3 184 aa5.12□□□□□ -1.59
RFC4-213ENST00000489028 CCM2LQ9NUG4 571 aaPredicted RBP5.12□□□□□ -1.59
RFC4-213ENST00000489028 CEP72Q9P209 647 aa5.12□□□□□ -1.59
RFC4-213ENST00000489028 ATP8A1Q9Y2Q0 1164 aa5.12□□□□□ -1.59
RFC4-213ENST00000489028 GIT1Q9Y2X7 761 aa5.12□□□□□ -1.59
RFC4-213ENST00000489028 K7ESF4 209 aa5.11□□□□□ -1.59
RFC4-213ENST00000489028 WNT10BO00744 389 aa5.11□□□□□ -1.59
RFC4-213ENST00000489028 ADCY6O43306 1168 aa5.11□□□□□ -1.59
RFC4-213ENST00000489028 HOXA3O43365 443 aaPredicted RBP5.11□□□□□ -1.59
RFC4-213ENST00000489028 C6P13671 934 aa5.11□□□□□ -1.59
RFC4-213ENST00000489028 TACR2P21452 398 aa5.11□□□□□ -1.59
RFC4-213ENST00000489028 PTTG1IPP53801 180 aa5.11□□□□□ -1.59
RFC4-213ENST00000489028 WNT3AP56704 352 aa5.11□□□□□ -1.59
RFC4-213ENST00000489028 MEF2AQ02078 507 aaPredicted RBP5.11□□□□□ -1.59
RFC4-213ENST00000489028 DUSP2Q05923 314 aa5.11□□□□□ -1.59
RFC4-213ENST00000489028 MRPL49Q13405 166 aaKnown RBP5.11□□□□□ -1.59
RFC4-213ENST00000489028 FOXE3Q13461 319 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms