RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 LRRC71Q8N4P6 559 aa11.73□□□□□ -0.53
USP11-209ENST00000488848 C7orf31Q8N865 590 aa11.73□□□□□ -0.53
USP11-209ENST00000488848 ANKLE1Q8NAG6 615 aa11.73□□□□□ -0.53
USP11-209ENST00000488848 DEPTORQ8TB45 409 aa11.73□□□□□ -0.53
USP11-209ENST00000488848 SRRTQ9BXP5 876 aaKnown RBP11.73□□□□□ -0.53
USP11-209ENST00000488848 METTL14Q9HCE5 456 aaKnown RBP11.73□□□□□ -0.53
USP11-209ENST00000488848 PTPRHQ9HD43 1115 aa11.73□□□□□ -0.53
USP11-209ENST00000488848 PRMT7Q9NVM4 692 aaPredicted RBP11.73□□□□□ -0.53
USP11-209ENST00000488848 CNTNAP2Q9UHC6 1331 aa11.73□□□□□ -0.53
USP11-209ENST00000488848 A0A1W2PQC6 194 aa11.72□□□□□ -0.53
USP11-209ENST00000488848 KCNJ18B7U540 433 aa11.72□□□□□ -0.53
USP11-209ENST00000488848 K7ERI5 159 aa11.72□□□□□ -0.53
USP11-209ENST00000488848 FAM189A1O60320 539 aa11.72□□□□□ -0.53
USP11-209ENST00000488848 TOM1L1O75674 476 aa11.72□□□□□ -0.53
USP11-209ENST00000488848 GJB1P08034 283 aa11.72□□□□□ -0.53
USP11-209ENST00000488848 CYP2C9P11712 490 aa11.72□□□□□ -0.53
USP11-209ENST00000488848 CDK7P50613 346 aa11.72□□□□□ -0.53
USP11-209ENST00000488848 ADAM9Q13443 819 aa11.72□□□□□ -0.53
USP11-209ENST00000488848 KCNJ12Q14500 433 aa11.72□□□□□ -0.53
USP11-209ENST00000488848 NR1I3Q14994 352 aa11.72□□□□□ -0.53
USP11-209ENST00000488848 SNX17Q15036 470 aa11.72□□□□□ -0.53
USP11-209ENST00000488848 KRT31Q15323 416 aa11.72□□□□□ -0.53
USP11-209ENST00000488848 MAPK6Q16659 721 aa11.72□□□□□ -0.53
USP11-209ENST00000488848 SLFN12LQ6IEE8 588 aa11.72□□□□□ -0.53
USP11-209ENST00000488848 TSHZ1Q6ZSZ6 1077 aa11.72□□□□□ -0.53
USP11-209ENST00000488848 NELFCDQ8IXH7 590 aa11.72□□□□□ -0.53
USP11-209ENST00000488848 RNF149Q8NC42 400 aa11.72□□□□□ -0.53
USP11-209ENST00000488848 ANKRD20A12PQ8NF67 263 aa11.72□□□□□ -0.53
USP11-209ENST00000488848 SH3TC2Q8TF17 1288 aa11.72□□□□□ -0.53
USP11-209ENST00000488848 CNOT6LQ96LI5 555 aaKnown RBP11.72□□□□□ -0.53
USP11-209ENST00000488848 GLT1D1Q96MS3 346 aa11.72□□□□□ -0.53
USP11-209ENST00000488848 KIFC3Q9BVG8 833 aa11.72□□□□□ -0.53
USP11-209ENST00000488848 MRPL4Q9BYD3 311 aaKnown RBP11.72□□□□□ -0.53
USP11-209ENST00000488848 UNC93B1Q9H1C4 597 aa11.72□□□□□ -0.53
USP11-209ENST00000488848 SUGCTQ9HAC7 445 aa11.72□□□□□ -0.53
USP11-209ENST00000488848 KIAA1586Q9HCI6 787 aa11.72□□□□□ -0.53
USP11-209ENST00000488848 POLD4Q9HCU8 107 aa11.72□□□□□ -0.53
USP11-209ENST00000488848 RTN4Q9NQC3 1192 aaKnown RBP11.72□□□□□ -0.53
USP11-209ENST00000488848 PRDM10Q9NQV6 1147 aa11.72□□□□□ -0.53
USP11-209ENST00000488848 INTS13Q9NVM9 706 aa11.72□□□□□ -0.53
USP11-209ENST00000488848 SQORQ9Y6N5 450 aa11.72□□□□□ -0.53
USP11-209ENST00000488848 ITIH6Q6UXX5 1313 aa11.71□□□□□ -0.53
USP11-209ENST00000488848 A0A0B4J269 797 aa11.71□□□□□ -0.53
USP11-209ENST00000488848 A0A0U1RQG5 324 aaPredicted RBP11.71□□□□□ -0.53
USP11-209ENST00000488848 A0A1W2PQ45 241 aaPredicted RBP11.71□□□□□ -0.53
USP11-209ENST00000488848 A0A1W2PQY0 241 aa11.71□□□□□ -0.53
USP11-209ENST00000488848 LRRIQ4A6NIV6 560 aa11.71□□□□□ -0.53
USP11-209ENST00000488848 LGALS16A8MUM7 142 aa11.71□□□□□ -0.53
USP11-209ENST00000488848 HNRNPDLO14979 420 aaKnown RBP11.71□□□□□ -0.53
USP11-209ENST00000488848 TREHO43280 583 aa11.71□□□□□ -0.53
USP11-209ENST00000488848 AKAP3O75969 853 aa11.71□□□□□ -0.53
USP11-209ENST00000488848 TPM3P06753 285 aa11.71□□□□□ -0.53
USP11-209ENST00000488848 HSPA1AP0DMV8 641 aaKnown RBP11.71□□□□□ -0.53
USP11-209ENST00000488848 HSPA1BP0DMV9 641 aaKnown RBP11.71□□□□□ -0.53
USP11-209ENST00000488848 CCL5P13501 91 aa11.71□□□□□ -0.53
USP11-209ENST00000488848 MNX1P50219 401 aaPredicted RBP11.71□□□□□ -0.53
USP11-209ENST00000488848 CLDN10P78369 228 aa11.71□□□□□ -0.53
USP11-209ENST00000488848 MCL1Q07820 350 aa11.71□□□□□ -0.53
USP11-209ENST00000488848 CCDC173Q0VFZ6 552 aa11.71□□□□□ -0.53
USP11-209ENST00000488848 STRN3Q13033 797 aa11.71□□□□□ -0.53
USP11-209ENST00000488848 PTK7Q13308 1070 aa11.71□□□□□ -0.53
USP11-209ENST00000488848 MAN2A1Q16706 1144 aa11.71□□□□□ -0.53
USP11-209ENST00000488848 TPD52L1Q16890 204 aaPredicted RBP11.71□□□□□ -0.53
USP11-209ENST00000488848 TRIM71Q2Q1W2 868 aaKnown RBP11.71□□□□□ -0.53
USP11-209ENST00000488848 FAM26DQ5JW98 314 aa11.71□□□□□ -0.53
USP11-209ENST00000488848 MIIPQ5JXC2 388 aa11.71□□□□□ -0.53
USP11-209ENST00000488848 GDF6Q6KF10 455 aaPredicted RBP11.71□□□□□ -0.53
USP11-209ENST00000488848 TRMT1LQ7Z2T5 733 aaKnown RBP11.71□□□□□ -0.53
USP11-209ENST00000488848 RHPN2Q8IUC4 686 aa11.71□□□□□ -0.53
USP11-209ENST00000488848 METTL13Q8N6R0 699 aa11.71□□□□□ -0.53
USP11-209ENST00000488848 XXYLT1Q8NBI6 393 aa11.71□□□□□ -0.53
USP11-209ENST00000488848 ACO2Q99798 780 aaKnown RBP11.71□□□□□ -0.53
USP11-209ENST00000488848 INO80BQ9C086 356 aaPredicted RBP11.71□□□□□ -0.53
USP11-209ENST00000488848 TNFSF13BQ9Y275 285 aa11.71□□□□□ -0.53
USP11-209ENST00000488848 GTPBP10A4D1E9 387 aaKnown RBP11.7□□□□□ -0.54
USP11-209ENST00000488848 ADCY5O95622 1261 aa11.7□□□□□ -0.54
USP11-209ENST00000488848 EDN1P05305 212 aa11.7□□□□□ -0.54
USP11-209ENST00000488848 PRKCBP05771 671 aa11.7□□□□□ -0.54
USP11-209ENST00000488848 COL6A1P12109 1028 aa11.7□□□□□ -0.54
USP11-209ENST00000488848 DARSP14868 501 aaKnown RBP11.7□□□□□ -0.54
USP11-209ENST00000488848 AXLP30530 894 aa11.7□□□□□ -0.54
USP11-209ENST00000488848 PSMC2P35998 433 aaKnown RBP11.7□□□□□ -0.54
USP11-209ENST00000488848 COPB1P53618 953 aaKnown RBP11.7□□□□□ -0.54
USP11-209ENST00000488848 CRYBB1P53674 252 aaPredicted RBP11.7□□□□□ -0.54
USP11-209ENST00000488848 IGBP1P78318 339 aa11.7□□□□□ -0.54
USP11-209ENST00000488848 MGAT3Q09327 533 aa11.7□□□□□ -0.54
USP11-209ENST00000488848 ITGA7Q13683 1181 aa11.7□□□□□ -0.54
USP11-209ENST00000488848 RUFY4Q6ZNE9 571 aa11.7□□□□□ -0.54
USP11-209ENST00000488848 INTS8Q75QN2 995 aaKnown RBP11.7□□□□□ -0.54
USP11-209ENST00000488848 SYCP3Q8IZU3 236 aa11.7□□□□□ -0.54
USP11-209ENST00000488848 ANP32BQ92688 251 aaKnown RBP11.7□□□□□ -0.54
USP11-209ENST00000488848 IQCDQ96DY2 449 aa11.7□□□□□ -0.54
USP11-209ENST00000488848 CCDC51Q96ER9 411 aa11.7□□□□□ -0.54
USP11-209ENST00000488848 MFSD14AQ96MC6 490 aa11.7□□□□□ -0.54
USP11-209ENST00000488848 ERGIC2Q96RQ1 377 aa11.7□□□□□ -0.54
USP11-209ENST00000488848 TUBGCP2Q9BSJ2 902 aa11.7□□□□□ -0.54
USP11-209ENST00000488848 XPO4Q9C0E2 1151 aaKnown RBP11.7□□□□□ -0.54
USP11-209ENST00000488848 MINDY3Q9H8M7 445 aa11.7□□□□□ -0.54
USP11-209ENST00000488848 HSPBP1Q9NZL4 362 aa11.7□□□□□ -0.54
USP11-209ENST00000488848 ARMCX3Q9UH62 379 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms