RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 PHLPP2Q6ZVD8 1323 aa16.62■□□□□ 0.25
CXCL12-207ENST00000488591 K7ERI5 159 aa16.61■□□□□ 0.25
CXCL12-207ENST00000488591 GTPBP6O43824 516 aaPredicted RBP16.61■□□□□ 0.25
CXCL12-207ENST00000488591 PRKCBP05771 671 aa16.61■□□□□ 0.25
CXCL12-207ENST00000488591 ARF4P18085 180 aaPredicted RBP16.61■□□□□ 0.25
CXCL12-207ENST00000488591 IGFBP4P22692 258 aa16.61■□□□□ 0.25
CXCL12-207ENST00000488591 STAT6P42226 847 aa16.61■□□□□ 0.25
CXCL12-207ENST00000488591 NPTX2P47972 431 aa16.61■□□□□ 0.25
CXCL12-207ENST00000488591 GATMP50440 423 aa16.61■□□□□ 0.25
CXCL12-207ENST00000488591 PRPF4BQ13523 1007 aaKnown RBP16.61■□□□□ 0.25
CXCL12-207ENST00000488591 EPC2Q52LR7 807 aa16.61■□□□□ 0.25
CXCL12-207ENST00000488591 ARSHQ5FYA8 562 aa16.61■□□□□ 0.25
CXCL12-207ENST00000488591 SV2BQ7L1I2 683 aa16.61■□□□□ 0.25
CXCL12-207ENST00000488591 ZNF598Q86UK7 904 aaKnown RBP16.61■□□□□ 0.25
CXCL12-207ENST00000488591 HACE1Q8IYU2 909 aa16.61■□□□□ 0.25
CXCL12-207ENST00000488591 DAW1Q8N136 415 aa16.61■□□□□ 0.25
CXCL12-207ENST00000488591 RSPH1Q8WYR4 309 aa16.61■□□□□ 0.25
CXCL12-207ENST00000488591 CPB2Q96IY4 423 aa16.61■□□□□ 0.25
CXCL12-207ENST00000488591 TRIM6Q9C030 488 aaPredicted RBP16.61■□□□□ 0.25
CXCL12-207ENST00000488591 FZD8Q9H461 694 aa16.61■□□□□ 0.25
CXCL12-207ENST00000488591 AAASQ9NRG9 546 aa16.61■□□□□ 0.25
CXCL12-207ENST00000488591 LARSQ9P2J5 1176 aaKnown RBP16.61■□□□□ 0.25
CXCL12-207ENST00000488591 RCOR1Q9UKL0 485 aa16.61■□□□□ 0.25
CXCL12-207ENST00000488591 ODF2LQ9ULJ1 636 aa16.61■□□□□ 0.25
CXCL12-207ENST00000488591 SFI1A8K8P3 1242 aa16.6■□□□□ 0.25
CXCL12-207ENST00000488591 ACKR2O00590 384 aa16.6■□□□□ 0.25
CXCL12-207ENST00000488591 RB1P06400 928 aa16.6■□□□□ 0.25
CXCL12-207ENST00000488591 PLS3P13797 630 aa16.6■□□□□ 0.25
CXCL12-207ENST00000488591 CTNNB1P35222 781 aa16.6■□□□□ 0.25
CXCL12-207ENST00000488591 BMPR1AP36894 532 aa16.6■□□□□ 0.25
CXCL12-207ENST00000488591 MAPK7Q13164 816 aa16.6■□□□□ 0.25
CXCL12-207ENST00000488591 AMHR2Q16671 573 aa16.6■□□□□ 0.25
CXCL12-207ENST00000488591 SLC27A1Q6PCB7 646 aa16.6■□□□□ 0.25
CXCL12-207ENST00000488591 SPRED2Q7Z698 418 aa16.6■□□□□ 0.25
CXCL12-207ENST00000488591 CLP1Q92989 425 aaKnown RBP16.6■□□□□ 0.25
CXCL12-207ENST00000488591 SPATA32Q96LK8 384 aa16.6■□□□□ 0.25
CXCL12-207ENST00000488591 KIFC3Q9BVG8 833 aa16.6■□□□□ 0.25
CXCL12-207ENST00000488591 PANK2Q9BZ23 570 aa16.6■□□□□ 0.25
CXCL12-207ENST00000488591 TMEM134Q9H6X4 195 aa16.6■□□□□ 0.25
CXCL12-207ENST00000488591 FAM13BQ9NYF5 915 aa16.6■□□□□ 0.25
CXCL12-207ENST00000488591 PCDHA7Q9UN72 937 aa16.6■□□□□ 0.25
CXCL12-207ENST00000488591 MRPL42Q9Y6G3 142 aaKnown RBP16.6■□□□□ 0.25
CXCL12-207ENST00000488591 CHD9Q3L8U1 2897 aa16.6■□□□□ 0.25
CXCL12-207ENST00000488591 MYO9BQ13459 2157 aa16.6■□□□□ 0.25
CXCL12-207ENST00000488591 NPHP3-ACAD11A0A0J9YXS1 232 aa16.59■□□□□ 0.25
CXCL12-207ENST00000488591 A0A1B0GUA9 196 aa16.59■□□□□ 0.25
CXCL12-207ENST00000488591 H0YCG3 227 aa16.59■□□□□ 0.25
CXCL12-207ENST00000488591 RFXAPO00287 272 aa16.59■□□□□ 0.25
CXCL12-207ENST00000488591 N4BP3O15049 544 aa16.59■□□□□ 0.25
CXCL12-207ENST00000488591 B4GALT5O43286 388 aa16.59■□□□□ 0.25
CXCL12-207ENST00000488591 TBCAO75347 108 aaKnown RBP16.59■□□□□ 0.25
CXCL12-207ENST00000488591 FAM13AO94988 1023 aa16.59■□□□□ 0.25
CXCL12-207ENST00000488591 ITGA4P13612 1032 aa16.59■□□□□ 0.25
CXCL12-207ENST00000488591 UBXN11Q5T124 520 aa16.59■□□□□ 0.25
CXCL12-207ENST00000488591 GLB1LQ6UWU2 654 aa16.59■□□□□ 0.25
CXCL12-207ENST00000488591 APBB1IPQ7Z5R6 666 aaPredicted RBP16.59■□□□□ 0.25
CXCL12-207ENST00000488591 MRPL10Q7Z7H8 261 aaKnown RBP16.59■□□□□ 0.25
CXCL12-207ENST00000488591 PDILTQ8N807 584 aa16.59■□□□□ 0.25
CXCL12-207ENST00000488591 HELQQ8TDG4 1101 aa16.59■□□□□ 0.25
CXCL12-207ENST00000488591 SPIRE2Q8WWL2 714 aa16.59■□□□□ 0.25
CXCL12-207ENST00000488591 CASD1Q96PB1 797 aa16.59■□□□□ 0.25
CXCL12-207ENST00000488591 REEP2Q9BRK0 252 aa16.59■□□□□ 0.25
CXCL12-207ENST00000488591 ADPGKQ9BRR6 497 aa16.59■□□□□ 0.25
CXCL12-207ENST00000488591 NTPCRQ9BSD7 190 aaKnown RBP16.59■□□□□ 0.25
CXCL12-207ENST00000488591 C11orf84Q9BUA3 381 aaPredicted RBP16.59■□□□□ 0.25
CXCL12-207ENST00000488591 PLVAPQ9BX97 442 aa16.59■□□□□ 0.25
CXCL12-207ENST00000488591 MRPL9Q9BYD2 267 aaKnown RBP16.59■□□□□ 0.25
CXCL12-207ENST00000488591 SCAND2PQ9GZW5 306 aaPredicted RBP16.59■□□□□ 0.25
CXCL12-207ENST00000488591 CCDC113Q9H0I3 377 aa16.59■□□□□ 0.25
CXCL12-207ENST00000488591 UBN1Q9NPG3 1134 aa16.59■□□□□ 0.25
CXCL12-207ENST00000488591 TYW1Q9NV66 732 aaKnown RBP16.59■□□□□ 0.25
CXCL12-207ENST00000488591 PCDHB12Q9Y5F1 795 aa16.59■□□□□ 0.25
CXCL12-207ENST00000488591 CNTNAP2Q9UHC6 1331 aa16.59■□□□□ 0.25
CXCL12-207ENST00000488591 RALGAPA2Q2PPJ7 1873 aa16.59■□□□□ 0.25
CXCL12-207ENST00000488591 MYH11P35749 1972 aa16.58■□□□□ 0.25
CXCL12-207ENST00000488591 EPOPA6NHQ4 379 aa16.58■□□□□ 0.24
CXCL12-207ENST00000488591 H3BNC9 293 aa16.58■□□□□ 0.24
CXCL12-207ENST00000488591 SLC16A4O15374 487 aa16.58■□□□□ 0.24
CXCL12-207ENST00000488591 ATF7P17544 494 aaPredicted RBP16.58■□□□□ 0.24
CXCL12-207ENST00000488591 SCP2P22307 547 aa16.58■□□□□ 0.24
CXCL12-207ENST00000488591 ANP32AP39687 249 aaKnown RBP16.58■□□□□ 0.24
CXCL12-207ENST00000488591 STRN3Q13033 797 aa16.58■□□□□ 0.24
CXCL12-207ENST00000488591 GPM6BQ13491 265 aa16.58■□□□□ 0.24
CXCL12-207ENST00000488591 GIT2Q14161 759 aa16.58■□□□□ 0.24
CXCL12-207ENST00000488591 LONRF3Q496Y0 759 aa16.58■□□□□ 0.24
CXCL12-207ENST00000488591 NAALADL2Q58DX5 795 aa16.58■□□□□ 0.24
CXCL12-207ENST00000488591 CLLU1OSQ5K130 101 aa16.58■□□□□ 0.24
CXCL12-207ENST00000488591 AXDND1Q5T1B0 1012 aaPredicted RBP16.58■□□□□ 0.24
CXCL12-207ENST00000488591 LRRC43Q8N309 656 aa16.58■□□□□ 0.24
CXCL12-207ENST00000488591 MYCT1Q8N699 235 aa16.58■□□□□ 0.24
CXCL12-207ENST00000488591 IQUBQ8NA54 791 aa16.58■□□□□ 0.24
CXCL12-207ENST00000488591 LRRC15Q8TF66 581 aa16.58■□□□□ 0.24
CXCL12-207ENST00000488591 LPPQ93052 612 aa16.58■□□□□ 0.24
CXCL12-207ENST00000488591 EIF2AQ9BY44 585 aaKnown RBP16.58■□□□□ 0.24
CXCL12-207ENST00000488591 LRRC27Q9C0I9 530 aa16.58■□□□□ 0.24
CXCL12-207ENST00000488591 CUEDC2Q9H467 287 aa16.58■□□□□ 0.24
CXCL12-207ENST00000488591 ZHX3Q9H4I2 956 aa16.58■□□□□ 0.24
CXCL12-207ENST00000488591 PARVGQ9HBI0 331 aa16.58■□□□□ 0.24
CXCL12-207ENST00000488591 LMCD1Q9NZU5 365 aa16.58■□□□□ 0.24
CXCL12-207ENST00000488591 IPPQ9Y573 584 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms